BLASTX nr result

ID: Glycyrrhiza23_contig00017762 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00017762
         (852 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003545861.1| PREDICTED: katanin p80 WD40 repeat-containin...   154   3e-35
ref|XP_003543076.1| PREDICTED: katanin p80 WD40 repeat-containin...   153   5e-35
ref|XP_003593480.1| Katanin p80 WD40-containing subunit B1 [Medi...   149   1e-33
ref|XP_003528432.1| PREDICTED: katanin p80 WD40 repeat-containin...   146   7e-33
ref|XP_003541552.1| PREDICTED: katanin p80 WD40 repeat-containin...   145   1e-32

>ref|XP_003545861.1| PREDICTED: katanin p80 WD40 repeat-containing subunit B1 homolog
           1-like [Glycine max]
          Length = 825

 Score =  154 bits (388), Expect = 3e-35
 Identities = 75/86 (87%), Positives = 83/86 (96%)
 Frame = +3

Query: 3   SKIERHVKVSLDMLLKLVAVFGPTISATISAPPSVGVDLHREERRECCNQCFMQLQKIQT 182
           SKIERHVK+SLDMLLKLVAVFGPTI AT+SAPPSVGVDLH+EERRECCN+CFM+LQKIQ 
Sbjct: 740 SKIERHVKLSLDMLLKLVAVFGPTIRATVSAPPSVGVDLHQEERRECCNKCFMELQKIQM 799

Query: 183 ALPILIRRGGLLAKSALELNLVLQQS 260
            LPILIR+GG+LA+SALELNLVLQQS
Sbjct: 800 TLPILIRKGGILARSALELNLVLQQS 825


>ref|XP_003543076.1| PREDICTED: katanin p80 WD40 repeat-containing subunit B1 homolog
           1-like [Glycine max]
          Length = 824

 Score =  153 bits (386), Expect = 5e-35
 Identities = 74/86 (86%), Positives = 83/86 (96%)
 Frame = +3

Query: 3   SKIERHVKVSLDMLLKLVAVFGPTISATISAPPSVGVDLHREERRECCNQCFMQLQKIQT 182
           SKIERHVKVSLDMLLK+VAVFGPT+ AT+SAPPSVGVDLH+EERRECCN+CFM+LQKIQ 
Sbjct: 739 SKIERHVKVSLDMLLKVVAVFGPTVLATVSAPPSVGVDLHQEERRECCNKCFMELQKIQM 798

Query: 183 ALPILIRRGGLLAKSALELNLVLQQS 260
            LPILIR+GG+LA+SALELNLVLQQS
Sbjct: 799 TLPILIRKGGILARSALELNLVLQQS 824


>ref|XP_003593480.1| Katanin p80 WD40-containing subunit B1 [Medicago truncatula]
            gi|355482528|gb|AES63731.1| Katanin p80 WD40-containing
            subunit B1 [Medicago truncatula]
          Length = 1131

 Score =  149 bits (375), Expect = 1e-33
 Identities = 72/86 (83%), Positives = 81/86 (94%)
 Frame = +3

Query: 3    SKIERHVKVSLDMLLKLVAVFGPTISATISAPPSVGVDLHREERRECCNQCFMQLQKIQT 182
            SK ERHVKVSLDMLLK  AVFG TI+ATISAPPSVGVDLHRE+RRECCN+CFM+LQK+QT
Sbjct: 1046 SKTERHVKVSLDMLLKFAAVFGSTITATISAPPSVGVDLHREQRRECCNECFMELQKVQT 1105

Query: 183  ALPILIRRGGLLAKSALELNLVLQQS 260
             LP+LIRRGGLLAKS++ELNLVLQ+S
Sbjct: 1106 ILPMLIRRGGLLAKSSMELNLVLQRS 1131


>ref|XP_003528432.1| PREDICTED: katanin p80 WD40 repeat-containing subunit B1 homolog
           1-like [Glycine max]
          Length = 712

 Score =  146 bits (368), Expect = 7e-33
 Identities = 74/85 (87%), Positives = 78/85 (91%)
 Frame = +3

Query: 3   SKIERHVKVSLDMLLKLVAVFGPTISATISAPPSVGVDLHREERRECCNQCFMQLQKIQT 182
           S IERHVKVSLDMLLKLVAVFGPT+ +TISAPPSVGVDLH E+RREC NQCFMQLQKI+ 
Sbjct: 627 SNIERHVKVSLDMLLKLVAVFGPTVRSTISAPPSVGVDLHAEQRRECSNQCFMQLQKIRL 686

Query: 183 ALPILIRRGGLLAKSALELNLVLQQ 257
            LPILIRRGGLLAKSA ELNLVLQQ
Sbjct: 687 ILPILIRRGGLLAKSAQELNLVLQQ 711


>ref|XP_003541552.1| PREDICTED: katanin p80 WD40 repeat-containing subunit B1 homolog
           1-like [Glycine max]
          Length = 814

 Score =  145 bits (366), Expect = 1e-32
 Identities = 73/85 (85%), Positives = 78/85 (91%)
 Frame = +3

Query: 3   SKIERHVKVSLDMLLKLVAVFGPTISATISAPPSVGVDLHREERRECCNQCFMQLQKIQT 182
           S IERHVKVSLDMLLKLVAVFGPTI +TISAPPSVG+DLH E+RREC NQCFMQLQKI+ 
Sbjct: 729 SNIERHVKVSLDMLLKLVAVFGPTIRSTISAPPSVGIDLHAEQRRECSNQCFMQLQKIRM 788

Query: 183 ALPILIRRGGLLAKSALELNLVLQQ 257
            LPILIRRGG+LAKSA ELNLVLQQ
Sbjct: 789 ILPILIRRGGILAKSAQELNLVLQQ 813


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