BLASTX nr result

ID: Glycyrrhiza23_contig00017690 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00017690
         (1019 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFW68176.1| hypothetical protein ZEAMMB73_712841 [Zea mays]         83   9e-14
ref|XP_002451200.1| hypothetical protein SORBIDRAFT_05g025720 [S...    79   1e-12
gb|ABA97563.1| retrotransposon protein, putative, unclassified [...    77   7e-12
gb|EEE53090.1| hypothetical protein OsJ_35851 [Oryza sativa Japo...    77   7e-12
gb|AFP55576.1| hypothetical protein [Rosa rugosa]                      76   1e-11

>gb|AFW68176.1| hypothetical protein ZEAMMB73_712841 [Zea mays]
          Length = 269

 Score = 83.2 bits (204), Expect = 9e-14
 Identities = 50/136 (36%), Positives = 76/136 (55%), Gaps = 2/136 (1%)
 Frame = +3

Query: 6   IMWRPPPIGIFKINIDVSFIKNKKLGATGIIVRNHLRDVISGHTRKFP-VSSPIVAEALA 182
           + W+ P  G  KIN D +F+     GA G+++RN   +V++   + +  +   + +EALA
Sbjct: 103 VKWKAPLKGWVKINSDAAFVAETGKGARGVVMRNSQGEVLAAAAQLYEHIPDALTSEALA 162

Query: 183 L*DGVVLAQNLGMEKVLFESDNLMLIKACRKEE-VNGEIQNLAADILQMKESFQSCGFTW 359
             DGVVLAQ L MEKV+ E DN +L+   R EE     I  L  +I +    F+S   ++
Sbjct: 163 ARDGVVLAQMLSMEKVILEVDNSVLVALLRSEEGRRSAIAGLWQEIRERSVVFRSFDVSF 222

Query: 360 VARSGNGVAHLLAALA 407
           V + GN VAH+ A+ A
Sbjct: 223 VNKEGNEVAHICASKA 238


>ref|XP_002451200.1| hypothetical protein SORBIDRAFT_05g025720 [Sorghum bicolor]
           gi|241937043|gb|EES10188.1| hypothetical protein
           SORBIDRAFT_05g025720 [Sorghum bicolor]
          Length = 227

 Score = 79.3 bits (194), Expect = 1e-12
 Identities = 50/158 (31%), Positives = 75/158 (47%), Gaps = 2/158 (1%)
 Frame = +3

Query: 12  WRPPPIGIFKINIDVSFIKNKKLGATGIIVRNHLRDVISGHTRKFP-VSSPIVAEALAL* 188
           W  P +G FKIN D  F +    G+ G+++RN    V  G  R    V   + AEA+A  
Sbjct: 63  WEKPSLGWFKINTDAGFDQESNSGSAGVVIRNEASLVAGGSARWLENVPDALTAEAMAAR 122

Query: 189 DGVVLAQNLGMEKVLFESDNLMLIKACRKE-EVNGEIQNLAADILQMKESFQSCGFTWVA 365
           +G+ L   LG+++V+ E D   L K    E  ++  I  L  DI+++ + F      WV 
Sbjct: 123 EGLELVVELGLDRVILEVDCQELSKLLLSEYSISSCIGGLCFDIIELGKMFSEFCIRWVR 182

Query: 366 RSGNGVAHLLAALASRDALPGNWRWNLPTSLEALVEGD 479
           R  N VA+  A++ S       W  N+P  L  L + D
Sbjct: 183 RDANSVANFCASIVSPTDRCHFWIDNVPGWLVVLADAD 220


>gb|ABA97563.1| retrotransposon protein, putative, unclassified [Oryza sativa
            Japonica Group]
          Length = 839

 Score = 77.0 bits (188), Expect = 7e-12
 Identities = 56/162 (34%), Positives = 81/162 (50%), Gaps = 6/162 (3%)
 Frame = +3

Query: 12   WRPPPIGIFKINIDVSFIKNKKLGATGIIVRNHLRDVI-SGHTRKFPVSSPIVAEALAL* 188
            W  P +G+ KIN D +F  N + G  G I+R+HL  VI +G  R   +     AE LA  
Sbjct: 663  WSKPDMGVMKINSDGAFDPNNRKGGWGFIIRDHLGMVIKAGAGRTHVLLDAFHAEVLACA 722

Query: 189  DGVVLAQNLGMEKVLFESDNLMLIKACRKEEVNGEIQNLAADILQMKE----SFQSCGFT 356
             G+  A   G+++V  E+D+LML  A   E+ +  +  L   I +MK     +F+S    
Sbjct: 723  AGIKAANECGLQRVEAETDSLMLKMA--MEDNSYALSALGGIICEMKNFVNTNFRSFSVK 780

Query: 357  WVARSGNGVAHLLAALASRDALPGNWRW-NLPTSLEALVEGD 479
            +  R  N VAH LAAL   D L     W ++P+ +  LV  D
Sbjct: 781  YCPRGCNKVAHALAALGCNDHLQNTLSWDDVPSEVAELVTSD 822


>gb|EEE53090.1| hypothetical protein OsJ_35851 [Oryza sativa Japonica Group]
          Length = 502

 Score = 77.0 bits (188), Expect = 7e-12
 Identities = 56/162 (34%), Positives = 81/162 (50%), Gaps = 6/162 (3%)
 Frame = +3

Query: 12  WRPPPIGIFKINIDVSFIKNKKLGATGIIVRNHLRDVI-SGHTRKFPVSSPIVAEALAL* 188
           W  P +G+ KIN D +F  N + G  G I+R+HL  VI +G  R   +     AE LA  
Sbjct: 326 WSKPDMGVMKINSDGAFDPNNRKGGWGFIIRDHLGMVIKAGAGRTHVLLDAFHAEVLACA 385

Query: 189 DGVVLAQNLGMEKVLFESDNLMLIKACRKEEVNGEIQNLAADILQMKE----SFQSCGFT 356
            G+  A   G+++V  E+D+LML  A   E+ +  +  L   I +MK     +F+S    
Sbjct: 386 AGIKAANECGLQRVEAETDSLMLKMA--MEDNSYALSALGGIICEMKNFVNTNFRSFSVK 443

Query: 357 WVARSGNGVAHLLAALASRDALPGNWRW-NLPTSLEALVEGD 479
           +  R  N VAH LAAL   D L     W ++P+ +  LV  D
Sbjct: 444 YCPRGCNKVAHALAALGCNDHLQNTLSWDDVPSEVAELVTSD 485


>gb|AFP55576.1| hypothetical protein [Rosa rugosa]
          Length = 237

 Score = 76.3 bits (186), Expect = 1e-11
 Identities = 44/148 (29%), Positives = 73/148 (49%), Gaps = 2/148 (1%)
 Frame = +3

Query: 12  WRPPPIGIFKINIDVSFIKNKKLGATGIIVRNHLRDVISGHTRKFPVSSPIVAEALAL*D 191
           W PPP+   +IN D  + ++   GA   I R+    V+ G   +    SP+ AEALAL +
Sbjct: 26  WCPPPLNTVRINTDACWFQSSLSGAIAAIARDSRGAVLGGKAFRILAPSPMAAEALALRE 85

Query: 192 GVVLAQNLGMEKVLFESDNLMLIKA--CRKEEVNGEIQNLAADILQMKESFQSCGFTWVA 365
            V LA +  + +V+  SD+  LI+    R    +     +   +  + +S +   ++W++
Sbjct: 86  AVCLAMDFTLGEVIISSDSKSLIQCLEMRSRAPDWRAATIVEQVRSLTDS-RKVSWSWIS 144

Query: 366 RSGNGVAHLLAALASRDALPGNWRWNLP 449
           RS N  AHL+A+L  R     +W  N P
Sbjct: 145 RSANQAAHLVASLVHRGVCSSDWVQNPP 172


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