BLASTX nr result

ID: Glycyrrhiza23_contig00017666 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00017666
         (791 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFK36557.1| unknown [Medicago truncatula]                          228   9e-58
ref|XP_003531623.1| PREDICTED: uncharacterized protein LOC100783...   206   4e-51
ref|NP_001242824.1| uncharacterized protein LOC100810989 [Glycin...   203   4e-50
ref|XP_004141677.1| PREDICTED: U2 small nuclear ribonucleoprotei...   174   2e-41
ref|XP_004155937.1| PREDICTED: LOW QUALITY PROTEIN: U2 small nuc...   173   4e-41

>gb|AFK36557.1| unknown [Medicago truncatula]
          Length = 268

 Score =  228 bits (582), Expect = 9e-58
 Identities = 118/157 (75%), Positives = 124/157 (78%), Gaps = 1/157 (0%)
 Frame = -3

Query: 789 GGAYVVIDKRSKGEANVQXXXXXXXXXXXXXXXXXXGNHGDIAATQSGETAVGSDYALPV 610
           GGAYVVIDKRSKGEANVQ                   NHGDIA  QSG+  VGSD  +PV
Sbjct: 110 GGAYVVIDKRSKGEANVQGSSSDDGESDPDEPSENGSNHGDIATAQSGDAVVGSDNHVPV 169

Query: 609 ASEQHEKGG-NGGPCSTLFIANLGPNCTEDELKQALSVYPGFNMVKMRSRGGMPVAFADF 433
           A  QH KGG +GGPCSTLFIANLGPNCTEDELKQALSVY GFN+VKMRSRGGMPVAFADF
Sbjct: 170 ARAQHGKGGGDGGPCSTLFIANLGPNCTEDELKQALSVYAGFNLVKMRSRGGMPVAFADF 229

Query: 432 EEIDQAAKVIEELQSSLLPSSDRGGMHIEYARSKMRK 322
           EEIDQA KV+EELQ S LPSSDRGGMHIEYARS+MRK
Sbjct: 230 EEIDQAVKVMEELQGSSLPSSDRGGMHIEYARSRMRK 266


>ref|XP_003531623.1| PREDICTED: uncharacterized protein LOC100783764 [Glycine max]
          Length = 264

 Score =  206 bits (525), Expect = 4e-51
 Identities = 110/155 (70%), Positives = 115/155 (74%)
 Frame = -3

Query: 786 GAYVVIDKRSKGEANVQXXXXXXXXXXXXXXXXXXGNHGDIAATQSGETAVGSDYALPVA 607
           GAYVVIDKRSKGE ++Q                   N GD+A   S ETAVGSD A+ V 
Sbjct: 111 GAYVVIDKRSKGEPDLQGSSSEDGDSDPDEPSDSGDNQGDLAIMTSDETAVGSDNAVSV- 169

Query: 606 SEQHEKGGNGGPCSTLFIANLGPNCTEDELKQALSVYPGFNMVKMRSRGGMPVAFADFEE 427
            EQH KG  GG CSTLFIANLGPNCTEDELKQA S Y GFNMVKMRSRGGMPVAF DFEE
Sbjct: 170 -EQHGKGSTGGLCSTLFIANLGPNCTEDELKQAFSAYTGFNMVKMRSRGGMPVAFVDFEE 228

Query: 426 IDQAAKVIEELQSSLLPSSDRGGMHIEYARSKMRK 322
             QAAKV+EELQ SLLPSSDRGGMHIEYARSKMRK
Sbjct: 229 THQAAKVMEELQGSLLPSSDRGGMHIEYARSKMRK 263


>ref|NP_001242824.1| uncharacterized protein LOC100810989 [Glycine max]
           gi|255636681|gb|ACU18677.1| unknown [Glycine max]
          Length = 265

 Score =  203 bits (516), Expect = 4e-50
 Identities = 110/156 (70%), Positives = 115/156 (73%)
 Frame = -3

Query: 789 GGAYVVIDKRSKGEANVQXXXXXXXXXXXXXXXXXXGNHGDIAATQSGETAVGSDYALPV 610
           G A VVIDKRS GE ++Q                   N G+IA   S ETAVGSD A+ V
Sbjct: 111 GEACVVIDKRSTGEPDLQGSSSDDGDSDPDEPSDSGDNQGNIAIMTSDETAVGSDNAVSV 170

Query: 609 ASEQHEKGGNGGPCSTLFIANLGPNCTEDELKQALSVYPGFNMVKMRSRGGMPVAFADFE 430
             EQH KG  GG CSTLFIANLGPNCTEDELKQA SVY GFNMVKMRSRGGMPVAF DFE
Sbjct: 171 --EQHGKGSAGGLCSTLFIANLGPNCTEDELKQAFSVYTGFNMVKMRSRGGMPVAFVDFE 228

Query: 429 EIDQAAKVIEELQSSLLPSSDRGGMHIEYARSKMRK 322
           E DQAAKV+EELQ SLLPSSDRGGMHIEYARSKMRK
Sbjct: 229 ETDQAAKVVEELQGSLLPSSDRGGMHIEYARSKMRK 264


>ref|XP_004141677.1| PREDICTED: U2 small nuclear ribonucleoprotein B''-like [Cucumis
           sativus]
          Length = 262

 Score =  174 bits (441), Expect = 2e-41
 Identities = 93/156 (59%), Positives = 108/156 (69%)
 Frame = -3

Query: 789 GGAYVVIDKRSKGEANVQXXXXXXXXXXXXXXXXXXGNHGDIAATQSGETAVGSDYALPV 610
           GGAYVVIDKR K +AN Q                   +     A QS E  V    A+  
Sbjct: 115 GGAYVVIDKRKKTDANSQETSSDDGGSEP--------DEPSKKAQQSNEAVVTPANAISA 166

Query: 609 ASEQHEKGGNGGPCSTLFIANLGPNCTEDELKQALSVYPGFNMVKMRSRGGMPVAFADFE 430
             E HEK  +GGPCSTLFIANLGPNC EDELK+ L  YPGFN++K+R++ GMPVAFADFE
Sbjct: 167 PYEHHEKN-DGGPCSTLFIANLGPNCNEDELKEVLCKYPGFNVLKLRAKSGMPVAFADFE 225

Query: 429 EIDQAAKVIEELQSSLLPSSDRGGMHIEYARSKMRK 322
           +I+QA+KV+EELQ S+LPSSDRGGMHIEYARSKMRK
Sbjct: 226 DIEQASKVMEELQGSVLPSSDRGGMHIEYARSKMRK 261


>ref|XP_004155937.1| PREDICTED: LOW QUALITY PROTEIN: U2 small nuclear ribonucleoprotein
           B''-like [Cucumis sativus]
          Length = 262

 Score =  173 bits (438), Expect = 4e-41
 Identities = 93/156 (59%), Positives = 107/156 (68%)
 Frame = -3

Query: 789 GGAYVVIDKRSKGEANVQXXXXXXXXXXXXXXXXXXGNHGDIAATQSGETAVGSDYALPV 610
           GGAYVVIDKR K  AN Q                   +     A QS E  V    A+  
Sbjct: 115 GGAYVVIDKRKKPXANSQETSSDDGGSEP--------DEPSKKAQQSNEAVVTPANAISA 166

Query: 609 ASEQHEKGGNGGPCSTLFIANLGPNCTEDELKQALSVYPGFNMVKMRSRGGMPVAFADFE 430
             E HEK  +GGPCSTLFIANLGPNC EDELK+ L  YPGFN++K+R++ GMPVAFADFE
Sbjct: 167 PYEHHEKN-DGGPCSTLFIANLGPNCNEDELKEVLCKYPGFNVLKLRAKSGMPVAFADFE 225

Query: 429 EIDQAAKVIEELQSSLLPSSDRGGMHIEYARSKMRK 322
           +I+QA+KV+EELQ S+LPSSDRGGMHIEYARSKMRK
Sbjct: 226 DIEQASKVMEELQGSVLPSSDRGGMHIEYARSKMRK 261


Top