BLASTX nr result

ID: Glycyrrhiza23_contig00017640 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00017640
         (1535 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFK38914.1| unknown [Lotus japonicus]                              297   e-101
dbj|BAE71261.1| hypothetical protein [Trifolium pratense]             299   e-100
ref|XP_003611125.1| General transcription factor IIE subunit [Me...   301   e-100
ref|XP_003611128.1| General transcription factor IIE subunit [Me...   295   7e-99
ref|NP_001240869.1| uncharacterized protein LOC100788089 [Glycin...   300   2e-97

>gb|AFK38914.1| unknown [Lotus japonicus]
          Length = 278

 Score =  297 bits (761), Expect(2) = e-101
 Identities = 147/167 (88%), Positives = 157/167 (94%)
 Frame = -1

Query: 1073 KNPKVKYDGERFSYKSKHDVRDKSQLLFLIRKFPEGIAVIDLKDAYPTVMEDLQALKAGR 894
            KNPKVK+DGE+FSYKSKHD+RDK +LLFLIRKFPEGIAVIDLKD+YPTV+EDLQALKA R
Sbjct: 112  KNPKVKFDGEKFSYKSKHDLRDKKELLFLIRKFPEGIAVIDLKDSYPTVLEDLQALKAAR 171

Query: 893  EIWLLSNFDSQEDIAYPNDPKVPIKVDDDLKQLFRGIELPRDMLDIEKDLQKNGMKPATN 714
            EIWLLSNFDSQEDIAYPNDPKVPIKVDDDLKQLFRGIELPRDM+DIE+DLQKNGMKPATN
Sbjct: 172  EIWLLSNFDSQEDIAYPNDPKVPIKVDDDLKQLFRGIELPRDMIDIERDLQKNGMKPATN 231

Query: 713  TAKRRSAAQMQGISSXXXXXXXKNEISKRTKLTNAHLPELFQNLNNS 573
            TAKRRSAAQMQGISS       KNEI+KRTKLTNAHLPELFQNL +S
Sbjct: 232  TAKRRSAAQMQGISSKPKPKKKKNEITKRTKLTNAHLPELFQNLKDS 278



 Score = 99.4 bits (246), Expect(2) = e-101
 Identities = 57/85 (67%), Positives = 60/85 (70%), Gaps = 4/85 (4%)
 Frame = -3

Query: 1398 MALQQKLDRFKRQQEKCQXXXXXXXXXXXXXXXAQPNGRSPTP----PVAVKFSNDTERL 1231
            MALQ+KLDRFKRQQEKCQ                Q   R+PTP    PV VKFSNDTERL
Sbjct: 1    MALQEKLDRFKRQQEKCQSTLTSIASTKASAT--QNGRRTPTPTPPAPVPVKFSNDTERL 58

Query: 1230 QHINSIRKAPVGAQMKRVIDLLFET 1156
            QHINSIRKAPVGAQMKRVI LLFE+
Sbjct: 59   QHINSIRKAPVGAQMKRVIALLFES 83


>dbj|BAE71261.1| hypothetical protein [Trifolium pratense]
          Length = 270

 Score =  299 bits (765), Expect(2) = e-100
 Identities = 149/167 (89%), Positives = 156/167 (93%)
 Frame = -1

Query: 1073 KNPKVKYDGERFSYKSKHDVRDKSQLLFLIRKFPEGIAVIDLKDAYPTVMEDLQALKAGR 894
            KNPKV+YDGERFSYKSKH +RDK +LLFLIRKFPEGIAVIDLKD+YPTVMEDLQALKAGR
Sbjct: 104  KNPKVRYDGERFSYKSKHSLRDKKELLFLIRKFPEGIAVIDLKDSYPTVMEDLQALKAGR 163

Query: 893  EIWLLSNFDSQEDIAYPNDPKVPIKVDDDLKQLFRGIELPRDMLDIEKDLQKNGMKPATN 714
            EIWLLSNFDSQEDIAYPNDPKVPIKVDDDLK LFRGIELPRDMLDIE+DLQKNGMKPATN
Sbjct: 164  EIWLLSNFDSQEDIAYPNDPKVPIKVDDDLKLLFRGIELPRDMLDIERDLQKNGMKPATN 223

Query: 713  TAKRRSAAQMQGISSXXXXXXXKNEISKRTKLTNAHLPELFQNLNNS 573
            TAKRRSAAQM+GISS       KNEI+KRTKLTNAHLPELFQNL NS
Sbjct: 224  TAKRRSAAQMEGISSKPKPKKKKNEITKRTKLTNAHLPELFQNLKNS 270



 Score = 95.1 bits (235), Expect(2) = e-100
 Identities = 53/81 (65%), Positives = 56/81 (69%)
 Frame = -3

Query: 1398 MALQQKLDRFKRQQEKCQXXXXXXXXXXXXXXXAQPNGRSPTPPVAVKFSNDTERLQHIN 1219
            MALQ KLDRFK+QQEKC                   +   P+P V VKFSNDTERLQHIN
Sbjct: 1    MALQGKLDRFKKQQEKCASTLSSIAASKAA------SSAVPSPLVPVKFSNDTERLQHIN 54

Query: 1218 SIRKAPVGAQMKRVIDLLFET 1156
            SIRKAPVGAQMKRVIDLLFET
Sbjct: 55   SIRKAPVGAQMKRVIDLLFET 75


>ref|XP_003611125.1| General transcription factor IIE subunit [Medicago truncatula]
            gi|355512460|gb|AES94083.1| General transcription factor
            IIE subunit [Medicago truncatula]
            gi|388501522|gb|AFK38827.1| unknown [Medicago truncatula]
          Length = 270

 Score =  301 bits (770), Expect(2) = e-100
 Identities = 149/167 (89%), Positives = 157/167 (94%)
 Frame = -1

Query: 1073 KNPKVKYDGERFSYKSKHDVRDKSQLLFLIRKFPEGIAVIDLKDAYPTVMEDLQALKAGR 894
            KNPKV+YDGERFSYKSKH +RDK +LLFLIRKFPEGIAVIDLKD+YPTVMEDLQALK GR
Sbjct: 104  KNPKVRYDGERFSYKSKHALRDKKELLFLIRKFPEGIAVIDLKDSYPTVMEDLQALKGGR 163

Query: 893  EIWLLSNFDSQEDIAYPNDPKVPIKVDDDLKQLFRGIELPRDMLDIEKDLQKNGMKPATN 714
            EIWLLSNFDSQEDIAYPNDPKVPIKVDDDLKQLFRGIELPRDM+DIE+DLQKNGMKPATN
Sbjct: 164  EIWLLSNFDSQEDIAYPNDPKVPIKVDDDLKQLFRGIELPRDMIDIERDLQKNGMKPATN 223

Query: 713  TAKRRSAAQMQGISSXXXXXXXKNEISKRTKLTNAHLPELFQNLNNS 573
            TAKRRSAAQM+GISS       KNEI+KRTKLTNAHLPELFQNLNNS
Sbjct: 224  TAKRRSAAQMEGISSKPKPKKKKNEITKRTKLTNAHLPELFQNLNNS 270



 Score = 91.7 bits (226), Expect(2) = e-100
 Identities = 53/81 (65%), Positives = 55/81 (67%)
 Frame = -3

Query: 1398 MALQQKLDRFKRQQEKCQXXXXXXXXXXXXXXXAQPNGRSPTPPVAVKFSNDTERLQHIN 1219
            MALQ KLDRFK+QQEKCQ                 PN  +P     VKFS DTERLQHIN
Sbjct: 1    MALQGKLDRFKKQQEKCQSTLSSIAANKAVSASV-PNALAP-----VKFSTDTERLQHIN 54

Query: 1218 SIRKAPVGAQMKRVIDLLFET 1156
            SIRKAPVGAQMKRVIDLLFET
Sbjct: 55   SIRKAPVGAQMKRVIDLLFET 75


>ref|XP_003611128.1| General transcription factor IIE subunit [Medicago truncatula]
            gi|355512463|gb|AES94086.1| General transcription factor
            IIE subunit [Medicago truncatula]
          Length = 307

 Score =  295 bits (754), Expect(2) = 7e-99
 Identities = 149/172 (86%), Positives = 157/172 (91%), Gaps = 5/172 (2%)
 Frame = -1

Query: 1073 KNPKVKYDGERFSYK-----SKHDVRDKSQLLFLIRKFPEGIAVIDLKDAYPTVMEDLQA 909
            KNPKV+YDGERFSYK     SKH +RDK +LLFLIRKFPEGIAVIDLKD+YPTVMEDLQA
Sbjct: 136  KNPKVRYDGERFSYKVTFILSKHALRDKKELLFLIRKFPEGIAVIDLKDSYPTVMEDLQA 195

Query: 908  LKAGREIWLLSNFDSQEDIAYPNDPKVPIKVDDDLKQLFRGIELPRDMLDIEKDLQKNGM 729
            LK GREIWLLSNFDSQEDIAYPNDPKVPIKVDDDLKQLFRGIELPRDM+DIE+DLQKNGM
Sbjct: 196  LKGGREIWLLSNFDSQEDIAYPNDPKVPIKVDDDLKQLFRGIELPRDMIDIERDLQKNGM 255

Query: 728  KPATNTAKRRSAAQMQGISSXXXXXXXKNEISKRTKLTNAHLPELFQNLNNS 573
            KPATNTAKRRSAAQM+GISS       KNEI+KRTKLTNAHLPELFQNLNNS
Sbjct: 256  KPATNTAKRRSAAQMEGISSKPKPKKKKNEITKRTKLTNAHLPELFQNLNNS 307



 Score = 94.4 bits (233), Expect(2) = 7e-99
 Identities = 55/84 (65%), Positives = 57/84 (67%)
 Frame = -3

Query: 1407 SIKMALQQKLDRFKRQQEKCQXXXXXXXXXXXXXXXAQPNGRSPTPPVAVKFSNDTERLQ 1228
            SI MALQ KLDRFK+QQEKCQ                 PN  +P     VKFS DTERLQ
Sbjct: 30   SITMALQGKLDRFKKQQEKCQSTLSSIAANKAVSASV-PNALAP-----VKFSTDTERLQ 83

Query: 1227 HINSIRKAPVGAQMKRVIDLLFET 1156
            HINSIRKAPVGAQMKRVIDLLFET
Sbjct: 84   HINSIRKAPVGAQMKRVIDLLFET 107


>ref|NP_001240869.1| uncharacterized protein LOC100788089 [Glycine max]
            gi|255639642|gb|ACU20115.1| unknown [Glycine max]
          Length = 257

 Score =  300 bits (768), Expect(2) = 2e-97
 Identities = 148/164 (90%), Positives = 156/164 (95%)
 Frame = -1

Query: 1073 KNPKVKYDGERFSYKSKHDVRDKSQLLFLIRKFPEGIAVIDLKDAYPTVMEDLQALKAGR 894
            KNPKVKYDGERFSYKSKHDVRDK+QLLFL+RKFPEGIAV+DLKD+YPTVMEDLQALKA R
Sbjct: 93   KNPKVKYDGERFSYKSKHDVRDKNQLLFLVRKFPEGIAVVDLKDSYPTVMEDLQALKAAR 152

Query: 893  EIWLLSNFDSQEDIAYPNDPKVPIKVDDDLKQLFRGIELPRDMLDIEKDLQKNGMKPATN 714
            EIWLLSNFDSQEDIAYPNDPKVPIKVDDDLKQLFRGIELPRDM+DIE+DLQKNGMKPATN
Sbjct: 153  EIWLLSNFDSQEDIAYPNDPKVPIKVDDDLKQLFRGIELPRDMIDIERDLQKNGMKPATN 212

Query: 713  TAKRRSAAQMQGISSXXXXXXXKNEISKRTKLTNAHLPELFQNL 582
            TAKRRSAAQM+GISS       KNEI+KRTKLTNAHLPELFQNL
Sbjct: 213  TAKRRSAAQMEGISSKPKPKKKKNEITKRTKLTNAHLPELFQNL 256



 Score = 84.3 bits (207), Expect(2) = 2e-97
 Identities = 48/81 (59%), Positives = 53/81 (65%)
 Frame = -3

Query: 1398 MALQQKLDRFKRQQEKCQXXXXXXXXXXXXXXXAQPNGRSPTPPVAVKFSNDTERLQHIN 1219
            MA Q+K +RFKRQ EK                     GR+P P   +KFSNDTERLQH+N
Sbjct: 1    MAFQEKQNRFKRQPEKSASASQY--------------GRTPAP---IKFSNDTERLQHVN 43

Query: 1218 SIRKAPVGAQMKRVIDLLFET 1156
            SIRKAPVGAQMKRVIDLLFET
Sbjct: 44   SIRKAPVGAQMKRVIDLLFET 64


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