BLASTX nr result
ID: Glycyrrhiza23_contig00017628
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Glycyrrhiza23_contig00017628
(981 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_003548799.1| PREDICTED: transportin-3-like [Glycine max] 379 e-103
ref|XP_003624561.1| Transportin-3 [Medicago truncatula] gi|35549... 373 e-101
ref|XP_002321068.1| predicted protein [Populus trichocarpa] gi|2... 320 4e-85
ref|XP_002276597.2| PREDICTED: transportin-3-like [Vitis vinifer... 317 2e-84
emb|CAN65470.1| hypothetical protein VITISV_008981 [Vitis vinifera] 308 2e-81
>ref|XP_003548799.1| PREDICTED: transportin-3-like [Glycine max]
Length = 1011
Score = 379 bits (973), Expect = e-103
Identities = 184/201 (91%), Positives = 195/201 (97%)
Frame = +1
Query: 1 LSACGSLLEVSIQKAAICCTAMHRGAALAAMSYLSCFLDVGLVSLLEGMNCIIEGSFNTT 180
LSACGSLLE+SIQKAAICCTAMHRGAALAAMSYLSCFLDVGLVSLLE MNCI EGSFN T
Sbjct: 811 LSACGSLLEISIQKAAICCTAMHRGAALAAMSYLSCFLDVGLVSLLECMNCITEGSFNIT 870
Query: 181 AIHVISHSGEGLVSNVVYALLGVSAMSRVHKCATILQQLAAICTLSERTTWKAIFCWQTL 360
AIHVISHSGEGLVSNVVYALLGVSAMSRVHKCATILQQLAAICTL+ERTTWKAI CWQTL
Sbjct: 871 AIHVISHSGEGLVSNVVYALLGVSAMSRVHKCATILQQLAAICTLTERTTWKAILCWQTL 930
Query: 361 HGWIQSAVQALPAEYLNHGEAETLVPLWSKALADAAADYLQSKNSDGVKSDYGHMQGKGG 540
HGW+ +AVQALP+EYLNHGEAE +VPLWSKALADAA+DYL+SKNSDG+KSD+GHMQGKGG
Sbjct: 931 HGWLHAAVQALPSEYLNHGEAEAIVPLWSKALADAASDYLESKNSDGLKSDFGHMQGKGG 990
Query: 541 RVLKRLVREFADAHRNIPNLT 603
RVLKRLVREFAD+HRNIPNLT
Sbjct: 991 RVLKRLVREFADSHRNIPNLT 1011
>ref|XP_003624561.1| Transportin-3 [Medicago truncatula] gi|355499576|gb|AES80779.1|
Transportin-3 [Medicago truncatula]
Length = 1143
Score = 373 bits (957), Expect = e-101
Identities = 183/201 (91%), Positives = 192/201 (95%)
Frame = +1
Query: 1 LSACGSLLEVSIQKAAICCTAMHRGAALAAMSYLSCFLDVGLVSLLEGMNCIIEGSFNTT 180
LS CGSLLEVSIQKAAICCTAMHRGAALAAMSYLSCFLDVGLVSLLE MNCI EGS NTT
Sbjct: 943 LSVCGSLLEVSIQKAAICCTAMHRGAALAAMSYLSCFLDVGLVSLLESMNCIAEGSSNTT 1002
Query: 181 AIHVISHSGEGLVSNVVYALLGVSAMSRVHKCATILQQLAAICTLSERTTWKAIFCWQTL 360
IHVISHSGEGLVSNVVYALLGVSAMSRVHKCAT+LQQLAAICTLSERT+WK I CWQTL
Sbjct: 1003 TIHVISHSGEGLVSNVVYALLGVSAMSRVHKCATVLQQLAAICTLSERTSWKPILCWQTL 1062
Query: 361 HGWIQSAVQALPAEYLNHGEAETLVPLWSKALADAAADYLQSKNSDGVKSDYGHMQGKGG 540
+GW+QSAVQALPAEYLNHGE ETLVPLWSKALA AA+DYL+SKNS+G+KSD+GHMQGKGG
Sbjct: 1063 NGWLQSAVQALPAEYLNHGETETLVPLWSKALAAAASDYLESKNSNGLKSDFGHMQGKGG 1122
Query: 541 RVLKRLVREFADAHRNIPNLT 603
RVLKRLVREFADAHRNIPNLT
Sbjct: 1123 RVLKRLVREFADAHRNIPNLT 1143
>ref|XP_002321068.1| predicted protein [Populus trichocarpa] gi|222861841|gb|EEE99383.1|
predicted protein [Populus trichocarpa]
Length = 1008
Score = 320 bits (819), Expect = 4e-85
Identities = 150/201 (74%), Positives = 178/201 (88%)
Frame = +1
Query: 1 LSACGSLLEVSIQKAAICCTAMHRGAALAAMSYLSCFLDVGLVSLLEGMNCIIEGSFNTT 180
L+A GSLL+VS QKAAICCTAMHRGAALAAMSYLSCFL+VGL+SLLE NCI+EGS++
Sbjct: 808 LAASGSLLDVSFQKAAICCTAMHRGAALAAMSYLSCFLEVGLISLLESKNCILEGSYSAI 867
Query: 181 AIHVISHSGEGLVSNVVYALLGVSAMSRVHKCATILQQLAAICTLSERTTWKAIFCWQTL 360
+I VIS +GEGLVSN+VYALLGVSAMSRVHKCATILQQ+A+ C+LSE TTWK + CW++L
Sbjct: 868 SIQVISRNGEGLVSNLVYALLGVSAMSRVHKCATILQQVASFCSLSETTTWKVVLCWESL 927
Query: 361 HGWIQSAVQALPAEYLNHGEAETLVPLWSKALADAAADYLQSKNSDGVKSDYGHMQGKGG 540
HGW+ +AVQALP EYL GEAETLVP+W +AL AA+DYL SK +G K++YGHMQGKGG
Sbjct: 928 HGWLHAAVQALPVEYLKQGEAETLVPVWMEALVGAASDYLGSKTFNGEKNNYGHMQGKGG 987
Query: 541 RVLKRLVREFADAHRNIPNLT 603
RVLKR++REFAD+HRN+PNLT
Sbjct: 988 RVLKRIIREFADSHRNVPNLT 1008
>ref|XP_002276597.2| PREDICTED: transportin-3-like [Vitis vinifera]
gi|296082227|emb|CBI21232.3| unnamed protein product
[Vitis vinifera]
Length = 1015
Score = 317 bits (813), Expect = 2e-84
Identities = 157/201 (78%), Positives = 175/201 (87%)
Frame = +1
Query: 1 LSACGSLLEVSIQKAAICCTAMHRGAALAAMSYLSCFLDVGLVSLLEGMNCIIEGSFNTT 180
L+A GSLLEVS QKAAICCTAMHRGAALAAMSY+SCFL+VGL+SLLE M CI EGSF+
Sbjct: 815 LAASGSLLEVSFQKAAICCTAMHRGAALAAMSYMSCFLEVGLISLLESMTCIPEGSFSAV 874
Query: 181 AIHVISHSGEGLVSNVVYALLGVSAMSRVHKCATILQQLAAICTLSERTTWKAIFCWQTL 360
AI VISHSGEGLVSNVVYALLGVSAMSRVHK ATILQQLAA+C+LSE TT KAI CW++L
Sbjct: 875 AIQVISHSGEGLVSNVVYALLGVSAMSRVHKSATILQQLAAVCSLSEGTTCKAILCWESL 934
Query: 361 HGWIQSAVQALPAEYLNHGEAETLVPLWSKALADAAADYLQSKNSDGVKSDYGHMQGKGG 540
H W++ AVQALPAEYL GEAE LVP+W KAL AA DYL+SK DG K + GHMQGKGG
Sbjct: 935 HEWLRLAVQALPAEYLKQGEAEVLVPVWLKALGGAALDYLESKRCDGGKDNRGHMQGKGG 994
Query: 541 RVLKRLVREFADAHRNIPNLT 603
++LKRLVREFAD+HRN+PNLT
Sbjct: 995 QILKRLVREFADSHRNVPNLT 1015
>emb|CAN65470.1| hypothetical protein VITISV_008981 [Vitis vinifera]
Length = 383
Score = 308 bits (788), Expect = 2e-81
Identities = 153/196 (78%), Positives = 170/196 (86%)
Frame = +1
Query: 1 LSACGSLLEVSIQKAAICCTAMHRGAALAAMSYLSCFLDVGLVSLLEGMNCIIEGSFNTT 180
L+A GSLLEVS QKAAICCTAMHRGAALAAMSY+SCFL+VGL+SLLE M CI EGSF+
Sbjct: 176 LAASGSLLEVSFQKAAICCTAMHRGAALAAMSYMSCFLEVGLISLLESMTCIPEGSFSAV 235
Query: 181 AIHVISHSGEGLVSNVVYALLGVSAMSRVHKCATILQQLAAICTLSERTTWKAIFCWQTL 360
AI VISHSGEGLVSNVVYALLGVSAMSRVHK ATILQQLAA+C+LSE TT KAI CW++L
Sbjct: 236 AIQVISHSGEGLVSNVVYALLGVSAMSRVHKSATILQQLAAVCSLSEGTTCKAILCWESL 295
Query: 361 HGWIQSAVQALPAEYLNHGEAETLVPLWSKALADAAADYLQSKNSDGVKSDYGHMQGKGG 540
H W++ AVQALPAEYL GEAE LVP+W KAL AA DYL+SK DG K + GHMQGKGG
Sbjct: 296 HEWLRLAVQALPAEYLKQGEAEVLVPVWLKALGGAALDYLESKRCDGGKDNRGHMQGKGG 355
Query: 541 RVLKRLVREFADAHRN 588
++LKRLVREFAD+HRN
Sbjct: 356 QILKRLVREFADSHRN 371