BLASTX nr result

ID: Glycyrrhiza23_contig00017598 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00017598
         (369 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003612850.1| ABC transporter B family member [Medicago tr...   226   2e-57
ref|XP_003533440.1| PREDICTED: ABC transporter B family member 2...   223   2e-56
ref|XP_003517674.1| PREDICTED: ABC transporter B family member 2...   221   5e-56
ref|XP_003530557.1| PREDICTED: ABC transporter B family member 2...   211   4e-53
gb|AAF23176.1|AF216497_1 P-glycoprotein [Gossypium hirsutum]          204   6e-51

>ref|XP_003612850.1| ABC transporter B family member [Medicago truncatula]
            gi|355514185|gb|AES95808.1| ABC transporter B family
            member [Medicago truncatula]
          Length = 1234

 Score =  226 bits (575), Expect = 2e-57
 Identities = 116/122 (95%), Positives = 119/122 (97%)
 Frame = +3

Query: 3    EVMDRKSGITGDAGEELKTVEGTIELKRIHFSYPSRPDVIIFKDFNLRVPSGKSVALVGQ 182
            EVMDRKS I GDAGEELKTVEGTIELKRI+FSYPSRPDVIIFKDF+LRVPSGKSVALVGQ
Sbjct: 966  EVMDRKSEIKGDAGEELKTVEGTIELKRINFSYPSRPDVIIFKDFSLRVPSGKSVALVGQ 1025

Query: 183  SGSGKSSVISLILRFYDPISGKVLIDGKDITRLNLKSLRKHIGLVQQEPALFATSIYENI 362
            SGSGKSSVISLILRFYDP SGKVLIDGKDITR+NLKSLRKHIGLVQQEPALFATSIYENI
Sbjct: 1026 SGSGKSSVISLILRFYDPTSGKVLIDGKDITRINLKSLRKHIGLVQQEPALFATSIYENI 1085

Query: 363  LY 368
            LY
Sbjct: 1086 LY 1087



 Score =  138 bits (348), Expect = 4e-31
 Identities = 72/119 (60%), Positives = 89/119 (74%)
 Frame = +3

Query: 12  DRKSGITGDAGEELKTVEGTIELKRIHFSYPSRPDVIIFKDFNLRVPSGKSVALVGQSGS 191
           D  S  +   G +L  ++G I+   + FSYPSRPDV IF + NL +P+GK VALVG SGS
Sbjct: 336 DTVSKKSSKTGRKLSKLDGHIQFNDVCFSYPSRPDVGIFTNLNLDIPAGKIVALVGGSGS 395

Query: 192 GKSSVISLILRFYDPISGKVLIDGKDITRLNLKSLRKHIGLVQQEPALFATSIYENILY 368
           GKS+V+SLI RFY+PISG++L+D  DI  L+LK LR+ IGLV QEPALFATSI ENILY
Sbjct: 396 GKSTVVSLIERFYEPISGQILLDKNDIRELDLKWLRQQIGLVNQEPALFATSIKENILY 454


>ref|XP_003533440.1| PREDICTED: ABC transporter B family member 2-like [Glycine max]
          Length = 1245

 Score =  223 bits (567), Expect = 2e-56
 Identities = 113/122 (92%), Positives = 119/122 (97%)
 Frame = +3

Query: 3    EVMDRKSGITGDAGEELKTVEGTIELKRIHFSYPSRPDVIIFKDFNLRVPSGKSVALVGQ 182
            EVMDRKSGI+ D GEELKTV+GTIELKRI+FSYPSRPDVIIFKDFNLRVP+GKSVALVGQ
Sbjct: 979  EVMDRKSGISCDVGEELKTVDGTIELKRINFSYPSRPDVIIFKDFNLRVPAGKSVALVGQ 1038

Query: 183  SGSGKSSVISLILRFYDPISGKVLIDGKDITRLNLKSLRKHIGLVQQEPALFATSIYENI 362
            SGSGKSSVISLILRFYDP SG+VLIDGKDITRLNLKSLR+HIGLVQQEPALFATSIYENI
Sbjct: 1039 SGSGKSSVISLILRFYDPTSGRVLIDGKDITRLNLKSLRRHIGLVQQEPALFATSIYENI 1098

Query: 363  LY 368
            LY
Sbjct: 1099 LY 1100



 Score =  140 bits (354), Expect = 8e-32
 Identities = 75/124 (60%), Positives = 94/124 (75%), Gaps = 2/124 (1%)
 Frame = +3

Query: 3   EVMDRK--SGITGDAGEELKTVEGTIELKRIHFSYPSRPDVIIFKDFNLRVPSGKSVALV 176
           E+++R+  S  +   G +L  +EG I+ K + FSYPSRPDV IF +  L +PSGK +ALV
Sbjct: 341 EMIERETVSKSSSKTGRKLGKLEGHIQFKNVCFSYPSRPDVAIFNNLCLDIPSGKIIALV 400

Query: 177 GQSGSGKSSVISLILRFYDPISGKVLIDGKDITRLNLKSLRKHIGLVQQEPALFATSIYE 356
           G SGSGKS+VISLI RFY+PISG++L+D  DI  L+LK LR+ IGLV QEPALFATSI E
Sbjct: 401 GGSGSGKSTVISLIERFYEPISGQILLDRNDIRELDLKWLRQQIGLVNQEPALFATSIKE 460

Query: 357 NILY 368
           NILY
Sbjct: 461 NILY 464


>ref|XP_003517674.1| PREDICTED: ABC transporter B family member 2-like [Glycine max]
          Length = 1246

 Score =  221 bits (563), Expect = 5e-56
 Identities = 112/122 (91%), Positives = 119/122 (97%)
 Frame = +3

Query: 3    EVMDRKSGITGDAGEELKTVEGTIELKRIHFSYPSRPDVIIFKDFNLRVPSGKSVALVGQ 182
            EVMDRKSGI+ + GEELKTV+GTIELKRI+FSYPSRPDVIIFKDFNLRVP+GKSVALVGQ
Sbjct: 979  EVMDRKSGISCEVGEELKTVDGTIELKRINFSYPSRPDVIIFKDFNLRVPAGKSVALVGQ 1038

Query: 183  SGSGKSSVISLILRFYDPISGKVLIDGKDITRLNLKSLRKHIGLVQQEPALFATSIYENI 362
            SGSGKSSVISLILRFYDP SG+VLIDGKDITRLNLKSLR+HIGLVQQEPALFATSIYENI
Sbjct: 1039 SGSGKSSVISLILRFYDPTSGRVLIDGKDITRLNLKSLRRHIGLVQQEPALFATSIYENI 1098

Query: 363  LY 368
            LY
Sbjct: 1099 LY 1100



 Score =  141 bits (355), Expect = 6e-32
 Identities = 75/119 (63%), Positives = 89/119 (74%)
 Frame = +3

Query: 12  DRKSGITGDAGEELKTVEGTIELKRIHFSYPSRPDVIIFKDFNLRVPSGKSVALVGQSGS 191
           D  S  +   G +L  +EG I+ K I FSYPSRPDV IF +  L +PSGK VALVG SGS
Sbjct: 346 DTVSKSSSKTGRKLGKLEGHIQFKNICFSYPSRPDVAIFNNLCLDIPSGKIVALVGGSGS 405

Query: 192 GKSSVISLILRFYDPISGKVLIDGKDITRLNLKSLRKHIGLVQQEPALFATSIYENILY 368
           GKS+VISLI RFY+P+SG++L+D  DI  L+LK LR+ IGLV QEPALFATSI ENILY
Sbjct: 406 GKSTVISLIERFYEPLSGQILLDRNDIRELDLKWLRQQIGLVNQEPALFATSIKENILY 464


>ref|XP_003530557.1| PREDICTED: ABC transporter B family member 2-like [Glycine max]
          Length = 1247

 Score =  211 bits (538), Expect = 4e-53
 Identities = 105/122 (86%), Positives = 113/122 (92%)
 Frame = +3

Query: 3    EVMDRKSGITGDAGEELKTVEGTIELKRIHFSYPSRPDVIIFKDFNLRVPSGKSVALVGQ 182
            EVMDRK+GI GD GEELKTVEGTIELKRIHF YPSRPDV+IF DFNL+V +GK++ALVG 
Sbjct: 976  EVMDRKTGILGDVGEELKTVEGTIELKRIHFCYPSRPDVVIFNDFNLKVLAGKNIALVGH 1035

Query: 183  SGSGKSSVISLILRFYDPISGKVLIDGKDITRLNLKSLRKHIGLVQQEPALFATSIYENI 362
            SG GKSSVISLILRFYDP SGKV+IDGKDI +LNLKSLRKHIGLVQQEPALFATSIYENI
Sbjct: 1036 SGCGKSSVISLILRFYDPTSGKVMIDGKDIKKLNLKSLRKHIGLVQQEPALFATSIYENI 1095

Query: 363  LY 368
            LY
Sbjct: 1096 LY 1097



 Score =  146 bits (368), Expect = 2e-33
 Identities = 73/119 (61%), Positives = 94/119 (78%)
 Frame = +3

Query: 12  DRKSGITGDAGEELKTVEGTIELKRIHFSYPSRPDVIIFKDFNLRVPSGKSVALVGQSGS 191
           D  S  + + G++L  +EG I+ K + FSYPSRPDV+IF +F + +PSGK +ALVG SGS
Sbjct: 341 DTMSKASSENGKKLSKLEGHIQFKDVCFSYPSRPDVVIFNNFCIEIPSGKILALVGGSGS 400

Query: 192 GKSSVISLILRFYDPISGKVLIDGKDITRLNLKSLRKHIGLVQQEPALFATSIYENILY 368
           GKS+VISLI RFY+P+SG++L+DG +I  L+LK LR+ IGLV QEPALFATSI ENILY
Sbjct: 401 GKSTVISLIERFYEPLSGQILLDGNNIRELDLKWLRQQIGLVNQEPALFATSIRENILY 459


>gb|AAF23176.1|AF216497_1 P-glycoprotein [Gossypium hirsutum]
          Length = 1249

 Score =  204 bits (519), Expect = 6e-51
 Identities = 99/122 (81%), Positives = 113/122 (92%)
 Frame = +3

Query: 3    EVMDRKSGITGDAGEELKTVEGTIELKRIHFSYPSRPDVIIFKDFNLRVPSGKSVALVGQ 182
            E+MDRK+ + GDAGEEL  VEGTIELK +HFSYPSRPDV+IFKDF+L+V SGKS+ALVGQ
Sbjct: 981  EIMDRKTQVVGDAGEELTNVEGTIELKGVHFSYPSRPDVVIFKDFDLKVRSGKSMALVGQ 1040

Query: 183  SGSGKSSVISLILRFYDPISGKVLIDGKDITRLNLKSLRKHIGLVQQEPALFATSIYENI 362
            SGSGKSSV++LILRFYDP SGKV+IDG+D+ +L LKSLRKHIGLVQQEPALFATSIYENI
Sbjct: 1041 SGSGKSSVLALILRFYDPTSGKVMIDGRDVKKLKLKSLRKHIGLVQQEPALFATSIYENI 1100

Query: 363  LY 368
            LY
Sbjct: 1101 LY 1102



 Score =  146 bits (369), Expect = 1e-33
 Identities = 76/124 (61%), Positives = 96/124 (77%), Gaps = 2/124 (1%)
 Frame = +3

Query: 3   EVMDRK--SGITGDAGEELKTVEGTIELKRIHFSYPSRPDVIIFKDFNLRVPSGKSVALV 176
           E+++R   S  +   G +L  VEG IELK + FSYPSRPDV+IF  F L +P+GK VALV
Sbjct: 344 EMIERNTVSKTSSKTGRKLSKVEGNIELKNVSFSYPSRPDVVIFDRFCLNIPTGKIVALV 403

Query: 177 GQSGSGKSSVISLILRFYDPISGKVLIDGKDITRLNLKSLRKHIGLVQQEPALFATSIYE 356
           G SGSGKS+VISLI RFY+P++G++L+DG +I  L+LK LR+ IGLV QEPALFAT+I E
Sbjct: 404 GGSGSGKSTVISLIERFYEPLAGEILLDGNNIKGLDLKWLRQQIGLVNQEPALFATTIRE 463

Query: 357 NILY 368
           NILY
Sbjct: 464 NILY 467


Top