BLASTX nr result

ID: Glycyrrhiza23_contig00017534 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00017534
         (1143 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003547913.1| PREDICTED: pre-rRNA-processing protein esf1-...   412   e-112
ref|XP_003520147.1| PREDICTED: ESF1 homolog [Glycine max]             405   e-111
ref|XP_002269957.2| PREDICTED: pre-rRNA-processing protein esf1-...   323   5e-86
emb|CBI25839.3| unnamed protein product [Vitis vinifera]              322   1e-85
ref|XP_002534037.1| Pre-rRNA-processing protein ESF1, putative [...   316   6e-84

>ref|XP_003547913.1| PREDICTED: pre-rRNA-processing protein esf1-like [Glycine max]
          Length = 696

 Score =  412 bits (1058), Expect = e-112
 Identities = 211/340 (62%), Positives = 241/340 (70%), Gaps = 5/340 (1%)
 Frame = -2

Query: 1007 VISDPRFSKVHTDPRFREAPKRVTKVAIDSRFNKVFTDKSFLPGSAPVDKRGRPKHNTTS 828
            +ISDPR+SK HTDPRFREAPKR TKVAIDSRFN++FT KSFLP SA +DKRG+PK+N TS
Sbjct: 36   IISDPRYSKAHTDPRFREAPKRETKVAIDSRFNRMFTHKSFLPSSALIDKRGKPKNNPTS 95

Query: 827  QLDTYRHYYKIDVED-----DENKVXXXXXXXXXXXXXXXXXXSAIXXXXXXXXXXXXXX 663
            QL + RHYYK+D ++     DE +                   + +              
Sbjct: 96   QLGSLRHYYKVDEKEVEQSSDEEEDNEEELVKANRMKPESDKGTELEETSESESEETSES 155

Query: 662  XXXXXXXXXEAPDVQEKVEQIEKETHRLAVVNMDWRYVKAVDLYVLLSSFAPPNGLIKAV 483
                     E  D +E +  I+KETHR+AVVNMDWRYVKAVDLYVLLSSF PPNGLIK+V
Sbjct: 156  ESDVDTDTDEGADEEEDIATIDKETHRVAVVNMDWRYVKAVDLYVLLSSFVPPNGLIKSV 215

Query: 482  AVYPTEFGLQRMKEEEVHGPISLFGXXXXXXXXXXXXXXXXXXKLREYEKSRMRYYFALV 303
             VYP+EFGLQRMKEEEVHGPI LF                   KLR YEKSRMRYYFA+V
Sbjct: 216  TVYPSEFGLQRMKEEEVHGPIGLFDDEDEKNDEDSSNDDIDNEKLRAYEKSRMRYYFAVV 275

Query: 302  ECDSCNTADHIYKECDGIEFLHSSNPLDLRFIPDNMEFKQPPRDVATEAPANYECKDFYS 123
            ECDS  TA++IYKECDG+E   SSN LDLRFIPDNMEFK PPRDVATE PANYECKDFYS
Sbjct: 276  ECDSSATANYIYKECDGLELKQSSNALDLRFIPDNMEFKHPPRDVATEVPANYECKDFYS 335

Query: 122  RALQHSNVDLTWDEDEPLRAKTLKRKLNDEQLAQLELNEF 3
            RALQHS V+LTWD+DEPLRAKTLK+K  D+QLAQ+E+ EF
Sbjct: 336  RALQHSEVNLTWDDDEPLRAKTLKQKFTDDQLAQMEVKEF 375


>ref|XP_003520147.1| PREDICTED: ESF1 homolog [Glycine max]
          Length = 695

 Score =  405 bits (1042), Expect = e-111
 Identities = 213/343 (62%), Positives = 238/343 (69%), Gaps = 8/343 (2%)
 Frame = -2

Query: 1007 VISDPRFSKVHTDPRFREAPKRVTKVAIDSRFNKVFTDKSFLPGSAPVDKRGRPKHNTTS 828
            +ISDPR+SK HTDPRFREAPKR TKVA+DSRFN++FT KSFLP SAPVDKRG+PK+N TS
Sbjct: 36   LISDPRYSKAHTDPRFREAPKRETKVAVDSRFNRMFTHKSFLPSSAPVDKRGKPKNNPTS 95

Query: 827  QLDTYRHYYKIDV--------EDDENKVXXXXXXXXXXXXXXXXXXSAIXXXXXXXXXXX 672
            QL + RHYYKID         E++EN+                                 
Sbjct: 96   QLGSLRHYYKIDEKEVEQSSDEEEENEEELLKANQVKPESDKGTESEETSESESEETSES 155

Query: 671  XXXXXXXXXXXXEAPDVQEKVEQIEKETHRLAVVNMDWRYVKAVDLYVLLSSFAPPNGLI 492
                         A D +E +  I+KETHR+AVVNMDWRYVKAVDLYVLLSSF PPNGLI
Sbjct: 156  ESDVDTDTETDEGA-DEEEDIATIDKETHRVAVVNMDWRYVKAVDLYVLLSSFVPPNGLI 214

Query: 491  KAVAVYPTEFGLQRMKEEEVHGPISLFGXXXXXXXXXXXXXXXXXXKLREYEKSRMRYYF 312
            K+V VYP+EFGLQRMKEEEV GPI LF                    LR YEKSRMRYYF
Sbjct: 215  KSVRVYPSEFGLQRMKEEEVRGPIGLFDDEDSSNDDLDNEK------LRAYEKSRMRYYF 268

Query: 311  ALVECDSCNTADHIYKECDGIEFLHSSNPLDLRFIPDNMEFKQPPRDVATEAPANYECKD 132
            A+VECDS  TA++IYKECDG+E   SSN LDLRFIPDNMEFK PPRDVATE PANYECKD
Sbjct: 269  AVVECDSSATANYIYKECDGLELKQSSNALDLRFIPDNMEFKHPPRDVATEVPANYECKD 328

Query: 131  FYSRALQHSNVDLTWDEDEPLRAKTLKRKLNDEQLAQLELNEF 3
            FYSRALQHS V+LTWD+DEPLRAKTL RKL DEQLA+ E+ EF
Sbjct: 329  FYSRALQHSEVNLTWDDDEPLRAKTLNRKLTDEQLAEFEVKEF 371


>ref|XP_002269957.2| PREDICTED: pre-rRNA-processing protein esf1-like [Vitis vinifera]
          Length = 726

 Score =  323 bits (828), Expect = 5e-86
 Identities = 170/353 (48%), Positives = 224/353 (63%), Gaps = 14/353 (3%)
 Frame = -2

Query: 1019 DNNKVISDPRFSKVHTDPRFREAPKRVTKVAIDSRFNKVFTDKSFLPGSAPVDKRGRPKH 840
            +  K+++D RFS +H+DPRF++ PK  TKV IDSRFN++F DKSF   SAP+DKRG+PK 
Sbjct: 32   NGGKIVTDARFSSLHSDPRFQKVPKHKTKVEIDSRFNRMFHDKSFTSSSAPLDKRGKPKK 91

Query: 839  NTTSQLDTYRHYYKIDVED--------------DENKVXXXXXXXXXXXXXXXXXXSAIX 702
            + +   +T  HYY+++ ++              DEN++                      
Sbjct: 92   DRSG--NTLSHYYRLEEQEEEEKKKEISSEEDEDENEIRKLSASESDGESELSGAEYD-S 148

Query: 701  XXXXXXXXXXXXXXXXXXXXXXEAPDVQEKVEQIEKETHRLAVVNMDWRYVKAVDLYVLL 522
                                  E+P  +E +  IE+ETHRLAVVNM+WR VKAVDL+++L
Sbjct: 149  ESDASSTGSDTDEEDDGVYSEEESPAQEENIPVIEQETHRLAVVNMEWRQVKAVDLFMVL 208

Query: 521  SSFAPPNGLIKAVAVYPTEFGLQRMKEEEVHGPISLFGXXXXXXXXXXXXXXXXXXKLRE 342
            SSF P +G I +VA+YP+EFGL+RM+EE VHGPI LF                    LR 
Sbjct: 209  SSFLPKDGHILSVAIYPSEFGLKRMEEEAVHGPIGLFDDEKEQSDDDGDNEIDDEK-LRA 267

Query: 341  YEKSRMRYYFALVECDSCNTADHIYKECDGIEFLHSSNPLDLRFIPDNMEFKQPPRDVAT 162
            YEKSR+ YY+A+V+CDS  TAD++YK CDGIEF  SSN LDLRFIPD+MEFK PP D+AT
Sbjct: 268  YEKSRLSYYYAVVDCDSSATADYLYKACDGIEFERSSNVLDLRFIPDSMEFKHPPHDIAT 327

Query: 161  EAPANYECKDFYSRALQHSNVDLTWDEDEPLRAKTLKRKLNDEQLAQLELNEF 3
            EAPA YE  DF++RALQHS + ++WDEDEP RAKTLKRK ND+++A+L + EF
Sbjct: 328  EAPAKYEGLDFHTRALQHSKIHISWDEDEPQRAKTLKRKYNDDEVAELAMKEF 380


>emb|CBI25839.3| unnamed protein product [Vitis vinifera]
          Length = 738

 Score =  322 bits (825), Expect = 1e-85
 Identities = 170/353 (48%), Positives = 223/353 (63%), Gaps = 14/353 (3%)
 Frame = -2

Query: 1019 DNNKVISDPRFSKVHTDPRFREAPKRVTKVAIDSRFNKVFTDKSFLPGSAPVDKRGRPKH 840
            +  K+++D RFS +H+DPRF++ PK  TKV IDSRFN++F DKSF   SAP+DKRG+PK 
Sbjct: 32   NGGKIVTDARFSSLHSDPRFQKVPKHKTKVEIDSRFNRMFHDKSFTSSSAPLDKRGKPKK 91

Query: 839  NTTSQLDTYRHYYKIDVED--------------DENKVXXXXXXXXXXXXXXXXXXSAIX 702
            + +   +T  HYY+++ ++              DEN++                      
Sbjct: 92   DRSG--NTLSHYYRLEEQEEEEKKKEISSEEDEDENEIRKLSASESDGESELSGAEYD-S 148

Query: 701  XXXXXXXXXXXXXXXXXXXXXXEAPDVQEKVEQIEKETHRLAVVNMDWRYVKAVDLYVLL 522
                                  E+P  +E +  IE+ETHRLAVVNM+WR VKAVDL+++L
Sbjct: 149  ESDASSTGSDTDEEDDGVYSEEESPAQEENIPVIEQETHRLAVVNMEWRQVKAVDLFMVL 208

Query: 521  SSFAPPNGLIKAVAVYPTEFGLQRMKEEEVHGPISLFGXXXXXXXXXXXXXXXXXXKLRE 342
            SSF P +G I +VA+YP+EFGL+RM+EE VHGPI LF                    LR 
Sbjct: 209  SSFLPKDGHILSVAIYPSEFGLKRMEEEAVHGPIGLFDDEKEQSDDDGDNEIDDEK-LRA 267

Query: 341  YEKSRMRYYFALVECDSCNTADHIYKECDGIEFLHSSNPLDLRFIPDNMEFKQPPRDVAT 162
            YEKSR+ YY+A+V+CDS  TAD++YK CDGIEF  SSN LDLRFIPD+MEFK PP D+AT
Sbjct: 268  YEKSRLSYYYAVVDCDSSATADYLYKACDGIEFERSSNVLDLRFIPDSMEFKHPPHDIAT 327

Query: 161  EAPANYECKDFYSRALQHSNVDLTWDEDEPLRAKTLKRKLNDEQLAQLELNEF 3
            EAPA YE  DF++RALQHS + ++WDEDEP RAKTLKRK ND++ A+L + EF
Sbjct: 328  EAPAKYEGLDFHTRALQHSKIHISWDEDEPQRAKTLKRKYNDDEQAELAMKEF 380


>ref|XP_002534037.1| Pre-rRNA-processing protein ESF1, putative [Ricinus communis]
            gi|223525944|gb|EEF28341.1| Pre-rRNA-processing protein
            ESF1, putative [Ricinus communis]
          Length = 722

 Score =  316 bits (810), Expect = 6e-84
 Identities = 167/349 (47%), Positives = 216/349 (61%), Gaps = 13/349 (3%)
 Frame = -2

Query: 1010 KVISDPRFSKVHTDPRFREAPKRVTKVAIDSRFNKVFTDKSFLPGSAPVDKRGRPKHNTT 831
            +++ DPRF+ +HTDPRF++ PK+ TKV IDSRF+++FTDKSF   SAP+D RG+ K   +
Sbjct: 40   ELMEDPRFASIHTDPRFQKVPKQRTKVEIDSRFSRMFTDKSFGSSSAPLDSRGKAKKQNS 99

Query: 830  SQLDTYRHYYKIDVED---------DENKVXXXXXXXXXXXXXXXXXXSAIXXXXXXXXX 678
                  RHYY I+ E+         +E                     S +         
Sbjct: 100  ESF--LRHYYHIEEEENEKTKRGSSEEESESEEELNKFDNVAAESESSSELEASESEDET 157

Query: 677  XXXXXXXXXXXXXXEAPDVQ-EKVEQIEKETHRLAVVNMDWRYVKAVDLYVLLSSFAPPN 501
                          +  DV+ E +  IE  THRLAVVN+DWR+V+AVDLYV+L SF P  
Sbjct: 158  TTDEEDDEELEIEDDGSDVEVENIPTIEDGTHRLAVVNLDWRHVRAVDLYVVLRSFLPKG 217

Query: 500  GLIKAVAVYPTEFGLQRMKEEEVHGPISLFGXXXXXXXXXXXXXXXXXXK---LREYEKS 330
            G I +VAVYP+EFGLQRM+EEE+HGP+ LF                       LR YEKS
Sbjct: 218  GDILSVAVYPSEFGLQRMEEEELHGPVGLFDDEKKKNDEDEDEDEDDEIDEEKLRAYEKS 277

Query: 329  RMRYYFALVECDSCNTADHIYKECDGIEFLHSSNPLDLRFIPDNMEFKQPPRDVATEAPA 150
            R+RYY+A+VECDS  TA+H+YK CDG+EF  SSN  DLRF+PD+MEFK PPRD+A EAP 
Sbjct: 278  RLRYYYAVVECDSVATAEHLYKACDGVEFERSSNVFDLRFVPDSMEFKHPPRDIAKEAPT 337

Query: 149  NYECKDFYSRALQHSNVDLTWDEDEPLRAKTLKRKLNDEQLAQLELNEF 3
            +YE  DF+++ALQHSN+ ++WDEDEP R KTLKRK   +QLA++EL EF
Sbjct: 338  SYEGLDFHTKALQHSNIPISWDEDEPQRVKTLKRKFTADQLAEMELQEF 386


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