BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00017488
         (402 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003552546.1| PREDICTED: pentatricopeptide repeat-containi...   175   4e-42
ref|XP_003530418.1| PREDICTED: pentatricopeptide repeat-containi...   175   4e-42
ref|XP_003621319.1| Pentatricopeptide repeat-containing protein ...   142   3e-32
ref|XP_004155878.1| PREDICTED: pentatricopeptide repeat-containi...   141   5e-32
ref|XP_004134328.1| PREDICTED: pentatricopeptide repeat-containi...   140   1e-31

>ref|XP_003552546.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g29230-like [Glycine max]
          Length = 604

 Score =  175 bits (443), Expect = 4e-42
 Identities = 85/113 (75%), Positives = 94/113 (83%)
 Frame = +2

Query: 62  MQVAVRVQAPTWFSRRRLLEEKLSDLHRCTNIDHVKQIHAQVLKSHLHQDPYVAPKLIAA 241
           MQV V  + PTWFSRRRLLEEKL DLH+CTN+D V QIHAQVLK++LHQD +VAPKLIAA
Sbjct: 3   MQVPVGGRVPTWFSRRRLLEEKLCDLHKCTNLDSVNQIHAQVLKANLHQDLFVAPKLIAA 62

Query: 242 FSLCRHITSAVNVFNQIPNPNTHLYNSIIRAHALNHSPPSLPFNTFSLMQLNG 400
           FSLCRH+ SAVNVFN +P+PN HLYNSIIRAHA N S  SLPFN F  MQ NG
Sbjct: 63  FSLCRHLASAVNVFNHVPHPNVHLYNSIIRAHAHNSSHRSLPFNAFFQMQKNG 115


>ref|XP_003530418.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g29230-like [Glycine max]
          Length = 604

 Score =  175 bits (443), Expect = 4e-42
 Identities = 84/113 (74%), Positives = 95/113 (84%)
 Frame = +2

Query: 62  MQVAVRVQAPTWFSRRRLLEEKLSDLHRCTNIDHVKQIHAQVLKSHLHQDPYVAPKLIAA 241
           MQV V  + PTWFSR+RLLEEKL DLH+C+N+D V QIHAQVLK++LHQD +VAPKLIAA
Sbjct: 3   MQVPVGGRVPTWFSRQRLLEEKLCDLHKCSNLDSVNQIHAQVLKANLHQDLFVAPKLIAA 62

Query: 242 FSLCRHITSAVNVFNQIPNPNTHLYNSIIRAHALNHSPPSLPFNTFSLMQLNG 400
           FSLCRH+ SAVNVFN +P+PN HLYNSIIRAHA N S PSLPFN F  MQ NG
Sbjct: 63  FSLCRHLASAVNVFNHVPHPNVHLYNSIIRAHAHNTSHPSLPFNAFFQMQKNG 115


>ref|XP_003621319.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355496334|gb|AES77537.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 605

 Score =  142 bits (358), Expect = 3e-32
 Identities = 67/115 (58%), Positives = 89/115 (77%), Gaps = 2/115 (1%)
 Frame = +2

Query: 62  MQVAVRVQAPTWFSRRRLLEEKLSDLHRCTNIDHVKQIHAQVLKSHLHQDPYVAPKLIAA 241
           MQVA  ++A TWFS RR LEE ++DLH+CTN +H+KQIHAQ++K HLHQDPY+APKLIA+
Sbjct: 4   MQVASSIRAFTWFSLRRHLEENITDLHKCTNPNHIKQIHAQLIKCHLHQDPYIAPKLIAS 63

Query: 242 FSLCRHITSAVNVFNQIPNPNTHLYNSIIRAHAL--NHSPPSLPFNTFSLMQLNG 400
           +SL  +++SAVNVFNQ+P+PN HLYN +IRA++L  N S     F     M ++G
Sbjct: 64  YSLTNNLSSAVNVFNQVPDPNVHLYNYLIRAYSLSGNESNSLCAFGVLLKMHVDG 118


>ref|XP_004155878.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g29230-like [Cucumis sativus]
          Length = 561

 Score =  141 bits (356), Expect = 5e-32
 Identities = 69/116 (59%), Positives = 90/116 (77%), Gaps = 1/116 (0%)
 Frame = +2

Query: 56  ETMQV-AVRVQAPTWFSRRRLLEEKLSDLHRCTNIDHVKQIHAQVLKSHLHQDPYVAPKL 232
           E MQ+ +V ++ P+WFS R+LLE+KLSDLH+CTN++ VKQ+HAQ+LKS+LH D +V PKL
Sbjct: 25  EAMQMCSVPIRTPSWFSTRKLLEQKLSDLHKCTNLNQVKQLHAQILKSNLHVDLFVVPKL 84

Query: 233 IAAFSLCRHITSAVNVFNQIPNPNTHLYNSIIRAHALNHSPPSLPFNTFSLMQLNG 400
           I+AFSLCR +  A N FNQ+  PN HLYN++IRAH+ N S PS  F TF  MQ +G
Sbjct: 85  ISAFSLCRQMLLATNAFNQVQYPNVHLYNTMIRAHSHN-SQPSQAFATFFAMQRDG 139


>ref|XP_004134328.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g29230-like [Cucumis sativus]
          Length = 601

 Score =  140 bits (352), Expect = 1e-31
 Identities = 66/110 (60%), Positives = 86/110 (78%)
 Frame = +2

Query: 71  AVRVQAPTWFSRRRLLEEKLSDLHRCTNIDHVKQIHAQVLKSHLHQDPYVAPKLIAAFSL 250
           +V ++ P+WFS R+LLE+KLSDLH+CTN++ VKQ+HAQ+LKS+LH D +V PKLI+AFSL
Sbjct: 5   SVPIRTPSWFSTRKLLEQKLSDLHKCTNLNQVKQLHAQILKSNLHVDLFVVPKLISAFSL 64

Query: 251 CRHITSAVNVFNQIPNPNTHLYNSIIRAHALNHSPPSLPFNTFSLMQLNG 400
           CR +  A N FNQ+  PN HLYN++IRAH+ N S PS  F TF  MQ +G
Sbjct: 65  CRQMLLATNAFNQVQYPNVHLYNTMIRAHSHN-SQPSQAFATFFAMQRDG 113