BLASTX nr result
ID: Glycyrrhiza23_contig00017439
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Glycyrrhiza23_contig00017439
(1876 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_003521129.1| PREDICTED: DNA gyrase subunit B, chloroplast... 907 0.0
ref|XP_003554124.1| PREDICTED: DNA gyrase subunit B, chloroplast... 899 0.0
ref|XP_002522164.1| DNA gyrase subunit B, putative [Ricinus comm... 857 0.0
emb|CBI30132.3| unnamed protein product [Vitis vinifera] 853 0.0
ref|XP_002266668.1| PREDICTED: DNA gyrase subunit B, chloroplast... 853 0.0
>ref|XP_003521129.1| PREDICTED: DNA gyrase subunit B, chloroplastic/mitochondrial-like
[Glycine max]
Length = 726
Score = 907 bits (2343), Expect = 0.0
Identities = 473/578 (81%), Positives = 493/578 (85%), Gaps = 1/578 (0%)
Frame = -3
Query: 1733 IMASRYFFTASSFRXXXXXXXXXXXXXXXXXXXPRTRFSPRKFSIPRL-IQNAVIPRAYM 1557
IMASR F T+SSF RT F RKF P + NA PRA+M
Sbjct: 15 IMASR-FITSSSFHMRLSSFPSSTLSKT------RTSFPLRKFLAPCCSVPNAFTPRAFM 67
Query: 1556 SSFSTTEANQKNESSKAYGSDQIQVLEGLDPVRKRPGMYIGSTGPRGLHHLVYEILDNAV 1377
SS S TEA K+ESS AY SDQIQVLEGLDPVRKRPGMYIGSTGPRGLHHLVYEILDN+V
Sbjct: 68 SSISATEAFLKSESSTAYSSDQIQVLEGLDPVRKRPGMYIGSTGPRGLHHLVYEILDNSV 127
Query: 1376 DEAQAGFASKIHVVLHADDSVSITDNGRGIPTDLHPVTNKSALETVLTVLHAGGKFGGAN 1197
DEAQAGFASKI+VVLHADDSVSITDNGRGIPTDLHPVTNKSALETVLTVLHAGGKFGGAN
Sbjct: 128 DEAQAGFASKIYVVLHADDSVSITDNGRGIPTDLHPVTNKSALETVLTVLHAGGKFGGAN 187
Query: 1196 XXXXXXXXXXXXXXXXVNALSEELEITVWRDGLEYMQRYSRGKPVTILKSLVLPVEKKDR 1017
VNALSE LEITVWRDG+EYMQ YSRGKPV+ILK LVLP E+KD
Sbjct: 188 SGYSVSGGLHGVGLSVVNALSESLEITVWRDGMEYMQTYSRGKPVSILKCLVLPDERKDL 247
Query: 1016 QGTQIRFWPDKEVFTTAIQFDYNTIAGRIRELAFLNPKLTITLRKEDNDPEKTQYNEYFY 837
+GT++RFWPDKEVFTTAIQFD+NTIAGRIRELAFLNPKLTITLRKEDNDPEK QYNEYFY
Sbjct: 248 RGTRVRFWPDKEVFTTAIQFDHNTIAGRIRELAFLNPKLTITLRKEDNDPEKVQYNEYFY 307
Query: 836 AGGLVEYVKWLNTDKKALHDVLSFRKEMDGIAIDIALQWCEDAYSDTILGYANSIRTIDG 657
AGGLVEYVKWLNTDKKALHDVLSFRKE DGI +DIA QWCEDAYSDTILGYANSIRTIDG
Sbjct: 308 AGGLVEYVKWLNTDKKALHDVLSFRKETDGITVDIAFQWCEDAYSDTILGYANSIRTIDG 367
Query: 656 GTHIDGMKASLTRTLNNLGKKSKIIKEKDITLSGEHVREGLTCVVSVKVPNPEFEGQTKT 477
GTHID MKAS+TRTLN+LGKKSK+IKEKDITLSGEHVREGLTCVVSVKVPNPEFEGQTKT
Sbjct: 368 GTHIDAMKASITRTLNSLGKKSKVIKEKDITLSGEHVREGLTCVVSVKVPNPEFEGQTKT 427
Query: 476 RLGNPEVRKVVDQSIQEYLTEYLELHPDVLDSVLSXXXXXXXXXXXXXXXXXXXRQKSVL 297
RLGNPEVRKVVDQSIQEYLTEYLELHPDVLDSVLS RQKSVL
Sbjct: 428 RLGNPEVRKVVDQSIQEYLTEYLELHPDVLDSVLSKALNAFKAALAAKRARELVRQKSVL 487
Query: 296 RSSSLPGKLADCSSTNPEECEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDE 117
RSSSLPGKLADCSST+PEECEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILN+ER+DE
Sbjct: 488 RSSSLPGKLADCSSTDPEECEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNIERRDE 547
Query: 116 AAMYKNEEIQNLILGLGLGVKGEDFKKDALRYHKIIIL 3
AAMYKNEEIQNLILGLGLGVKGEDFKKDALRYHKIIIL
Sbjct: 548 AAMYKNEEIQNLILGLGLGVKGEDFKKDALRYHKIIIL 585
>ref|XP_003554124.1| PREDICTED: DNA gyrase subunit B, chloroplastic/mitochondrial-like
[Glycine max]
Length = 724
Score = 899 bits (2322), Expect = 0.0
Identities = 461/543 (84%), Positives = 478/543 (88%)
Frame = -3
Query: 1631 RTRFSPRKFSIPRLIQNAVIPRAYMSSFSTTEANQKNESSKAYGSDQIQVLEGLDPVRKR 1452
RT F RKF P + NAV PRA+MSS STTEA +ES AY SDQIQVLEGLDPVRKR
Sbjct: 41 RTSFPLRKFWAPCSVPNAVTPRAFMSSISTTEAFHNSESPTAYSSDQIQVLEGLDPVRKR 100
Query: 1451 PGMYIGSTGPRGLHHLVYEILDNAVDEAQAGFASKIHVVLHADDSVSITDNGRGIPTDLH 1272
PGMYIGSTGPRGLHHLVYEILDNAVDEAQAGFASKI VVL ADDSVSITDNGRGIPTDLH
Sbjct: 101 PGMYIGSTGPRGLHHLVYEILDNAVDEAQAGFASKIDVVLLADDSVSITDNGRGIPTDLH 160
Query: 1271 PVTNKSALETVLTVLHAGGKFGGANXXXXXXXXXXXXXXXXVNALSEELEITVWRDGLEY 1092
PVTNKSALETVLTVLHAGGKFGGAN VNALSE LEITVWRDG+EY
Sbjct: 161 PVTNKSALETVLTVLHAGGKFGGANSGYSVSGGLHGVGLSVVNALSELLEITVWRDGMEY 220
Query: 1091 MQRYSRGKPVTILKSLVLPVEKKDRQGTQIRFWPDKEVFTTAIQFDYNTIAGRIRELAFL 912
MQ YSRGKPV+ILK LVLP E+KD +GT++RFWPDKEVFTTAIQFD+NTIAGRIRELAFL
Sbjct: 221 MQTYSRGKPVSILKCLVLPDERKDLRGTRVRFWPDKEVFTTAIQFDHNTIAGRIRELAFL 280
Query: 911 NPKLTITLRKEDNDPEKTQYNEYFYAGGLVEYVKWLNTDKKALHDVLSFRKEMDGIAIDI 732
NPKLTIT RKEDNDPEK QYNEYFYAGGLVEYVKWLNTDKKALHDVLSFRKE DGI +DI
Sbjct: 281 NPKLTITFRKEDNDPEKVQYNEYFYAGGLVEYVKWLNTDKKALHDVLSFRKETDGITVDI 340
Query: 731 ALQWCEDAYSDTILGYANSIRTIDGGTHIDGMKASLTRTLNNLGKKSKIIKEKDITLSGE 552
A QW EDAYSDTILGYANSIRTIDGGTHID MKAS+TRTLN+LGKKSK+IKEKDITLSGE
Sbjct: 341 AFQWSEDAYSDTILGYANSIRTIDGGTHIDAMKASITRTLNSLGKKSKVIKEKDITLSGE 400
Query: 551 HVREGLTCVVSVKVPNPEFEGQTKTRLGNPEVRKVVDQSIQEYLTEYLELHPDVLDSVLS 372
HVREGLTCVVSVKVPNPEFEGQTKTRLGNPEVRKVVDQSIQEYLTEYLELHPDVLDSVLS
Sbjct: 401 HVREGLTCVVSVKVPNPEFEGQTKTRLGNPEVRKVVDQSIQEYLTEYLELHPDVLDSVLS 460
Query: 371 XXXXXXXXXXXXXXXXXXXRQKSVLRSSSLPGKLADCSSTNPEECEIFIVEGDSAGGSAK 192
RQKSVLRSSSLPGKLADCSST+PEECEIFIVEGDSAGGSAK
Sbjct: 461 KALNAFKAALAAKRARELVRQKSVLRSSSLPGKLADCSSTDPEECEIFIVEGDSAGGSAK 520
Query: 191 QGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLILGLGLGVKGEDFKKDALRYHKI 12
QGRDRRFQAILPLRGKILN+ER+DEAAMYKNEEIQNLILGLGLGVKGEDFKKDALRYHKI
Sbjct: 521 QGRDRRFQAILPLRGKILNIERRDEAAMYKNEEIQNLILGLGLGVKGEDFKKDALRYHKI 580
Query: 11 IIL 3
IIL
Sbjct: 581 IIL 583
>ref|XP_002522164.1| DNA gyrase subunit B, putative [Ricinus communis]
gi|223538602|gb|EEF40205.1| DNA gyrase subunit B,
putative [Ricinus communis]
Length = 732
Score = 857 bits (2213), Expect = 0.0
Identities = 432/543 (79%), Positives = 469/543 (86%)
Frame = -3
Query: 1631 RTRFSPRKFSIPRLIQNAVIPRAYMSSFSTTEANQKNESSKAYGSDQIQVLEGLDPVRKR 1452
R F R + +QNA RA+MSS + TE Q++ SSKAYGSDQIQVL+GL+PVRKR
Sbjct: 49 RVSFQWRAVTSRVTVQNAGSARAFMSSSTATEPFQESASSKAYGSDQIQVLKGLEPVRKR 108
Query: 1451 PGMYIGSTGPRGLHHLVYEILDNAVDEAQAGFASKIHVVLHADDSVSITDNGRGIPTDLH 1272
PGMYIGSTGPRGLHHLVYEILDNA+DEAQAG+AS++ V+LH+D+SVSI+DNGRGIPTDLH
Sbjct: 109 PGMYIGSTGPRGLHHLVYEILDNAIDEAQAGYASRVDVILHSDNSVSISDNGRGIPTDLH 168
Query: 1271 PVTNKSALETVLTVLHAGGKFGGANXXXXXXXXXXXXXXXXVNALSEELEITVWRDGLEY 1092
PVT KSALETVLTVLHAGGKFGG+N VNALSE LE+TVWRDG+EY
Sbjct: 169 PVTKKSALETVLTVLHAGGKFGGSNSGYSVSGGLHGVGLSVVNALSEGLEVTVWRDGMEY 228
Query: 1091 MQRYSRGKPVTILKSLVLPVEKKDRQGTQIRFWPDKEVFTTAIQFDYNTIAGRIRELAFL 912
QRYSRG PVTIL L VE +DRQGT +RFWPDKEVFTTAI+FDYNTIAGR+RELAFL
Sbjct: 229 RQRYSRGNPVTILMCHSLAVESRDRQGTCVRFWPDKEVFTTAIEFDYNTIAGRVRELAFL 288
Query: 911 NPKLTITLRKEDNDPEKTQYNEYFYAGGLVEYVKWLNTDKKALHDVLSFRKEMDGIAIDI 732
NPKLTITL+KEDNDPEK QY+EYFYAGGL+EYVKWLNTDKK LHDV+ F KE+DGI ID+
Sbjct: 289 NPKLTITLKKEDNDPEKNQYDEYFYAGGLIEYVKWLNTDKKPLHDVVGFGKEIDGITIDM 348
Query: 731 ALQWCEDAYSDTILGYANSIRTIDGGTHIDGMKASLTRTLNNLGKKSKIIKEKDITLSGE 552
ALQWC DAYSDTILGYANSIRTIDGGTHIDG KASLTRTLN+LGKKSKIIKEKDI LSGE
Sbjct: 349 ALQWCSDAYSDTILGYANSIRTIDGGTHIDGFKASLTRTLNSLGKKSKIIKEKDINLSGE 408
Query: 551 HVREGLTCVVSVKVPNPEFEGQTKTRLGNPEVRKVVDQSIQEYLTEYLELHPDVLDSVLS 372
HVREGLTC+VSVKVP+PEFEGQTKTRLGNPEVRKVVDQS+QEYLTEYLELHPDVLDS+LS
Sbjct: 409 HVREGLTCIVSVKVPSPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILS 468
Query: 371 XXXXXXXXXXXXXXXXXXXRQKSVLRSSSLPGKLADCSSTNPEECEIFIVEGDSAGGSAK 192
RQKSVLR+SSLPGKLADCSSTNPEE EIFIVEGDSAGGSAK
Sbjct: 469 KSLNALKAALAAKKARELVRQKSVLRTSSLPGKLADCSSTNPEESEIFIVEGDSAGGSAK 528
Query: 191 QGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLILGLGLGVKGEDFKKDALRYHKI 12
QGRDRRFQAILPLRGKILN+ERKDEAAMYKNEEIQNLILGLGLGVKGEDFKK+ALRYHKI
Sbjct: 529 QGRDRRFQAILPLRGKILNIERKDEAAMYKNEEIQNLILGLGLGVKGEDFKKEALRYHKI 588
Query: 11 IIL 3
IIL
Sbjct: 589 IIL 591
>emb|CBI30132.3| unnamed protein product [Vitis vinifera]
Length = 707
Score = 853 bits (2205), Expect = 0.0
Identities = 435/543 (80%), Positives = 466/543 (85%)
Frame = -3
Query: 1631 RTRFSPRKFSIPRLIQNAVIPRAYMSSFSTTEANQKNESSKAYGSDQIQVLEGLDPVRKR 1452
R F R+ S LI+NA PRA+MSS T+A Q++ SSKAYGS+QIQVLEGLDPVRKR
Sbjct: 24 RVGFQLRRVSNHFLIRNAASPRAFMSSSIATDAFQESTSSKAYGSEQIQVLEGLDPVRKR 83
Query: 1451 PGMYIGSTGPRGLHHLVYEILDNAVDEAQAGFASKIHVVLHADDSVSITDNGRGIPTDLH 1272
PGMYIGSTG RGLHHLVYEILDNA+DEAQAGFASK+ VVL ADDSVSITDNGRGIPT+LH
Sbjct: 84 PGMYIGSTGLRGLHHLVYEILDNAIDEAQAGFASKVDVVLLADDSVSITDNGRGIPTELH 143
Query: 1271 PVTNKSALETVLTVLHAGGKFGGANXXXXXXXXXXXXXXXXVNALSEELEITVWRDGLEY 1092
PVT KS+LETVLTVLHAGGKFGGA+ VNALSE LE+TVWRDG+EY
Sbjct: 144 PVTKKSSLETVLTVLHAGGKFGGASSGYSVSGGLHGVGLSVVNALSEALEVTVWRDGMEY 203
Query: 1091 MQRYSRGKPVTILKSLVLPVEKKDRQGTQIRFWPDKEVFTTAIQFDYNTIAGRIRELAFL 912
Q+YSRGKPVT L VLP E D QGT IRFWPDKEVFTT IQFDYNTIAGRIRELAFL
Sbjct: 204 QQKYSRGKPVTSLTHRVLPTESTDLQGTHIRFWPDKEVFTTEIQFDYNTIAGRIRELAFL 263
Query: 911 NPKLTITLRKEDNDPEKTQYNEYFYAGGLVEYVKWLNTDKKALHDVLSFRKEMDGIAIDI 732
NP+L ITLRKED DPEK QYNEY YAGGLVEYV+WLNTDKK +HDV+ FRK DGI+ID+
Sbjct: 264 NPELAITLRKEDKDPEKNQYNEYCYAGGLVEYVRWLNTDKKPVHDVVGFRKVADGISIDV 323
Query: 731 ALQWCEDAYSDTILGYANSIRTIDGGTHIDGMKASLTRTLNNLGKKSKIIKEKDITLSGE 552
ALQWC DAYSDT+LGYANSIRTIDGGTHIDGMKASLTRTLNNLGKKSKIIKEKDITLSGE
Sbjct: 324 ALQWCSDAYSDTMLGYANSIRTIDGGTHIDGMKASLTRTLNNLGKKSKIIKEKDITLSGE 383
Query: 551 HVREGLTCVVSVKVPNPEFEGQTKTRLGNPEVRKVVDQSIQEYLTEYLELHPDVLDSVLS 372
HVREGLTCV+SVKVPNPEFEGQTKTRLGNPEVRKVVDQ++QE+LTEYLELHPDVLD +LS
Sbjct: 384 HVREGLTCVISVKVPNPEFEGQTKTRLGNPEVRKVVDQTVQEFLTEYLELHPDVLDLILS 443
Query: 371 XXXXXXXXXXXXXXXXXXXRQKSVLRSSSLPGKLADCSSTNPEECEIFIVEGDSAGGSAK 192
RQKSVL+SSSLPGKLADCSSTNPEE EIFIVEGDSAGGSAK
Sbjct: 444 KSLNALKAALAAKRARELVRQKSVLKSSSLPGKLADCSSTNPEESEIFIVEGDSAGGSAK 503
Query: 191 QGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLILGLGLGVKGEDFKKDALRYHKI 12
QGRDRRFQAILPLRGKILN+ERKDEAAMYK+EEIQNLILGLGLGVKGEDFKK+ALRYHKI
Sbjct: 504 QGRDRRFQAILPLRGKILNIERKDEAAMYKSEEIQNLILGLGLGVKGEDFKKEALRYHKI 563
Query: 11 IIL 3
IIL
Sbjct: 564 IIL 566
>ref|XP_002266668.1| PREDICTED: DNA gyrase subunit B, chloroplastic/mitochondrial-like
[Vitis vinifera]
Length = 719
Score = 853 bits (2205), Expect = 0.0
Identities = 435/543 (80%), Positives = 466/543 (85%)
Frame = -3
Query: 1631 RTRFSPRKFSIPRLIQNAVIPRAYMSSFSTTEANQKNESSKAYGSDQIQVLEGLDPVRKR 1452
R F R+ S LI+NA PRA+MSS T+A Q++ SSKAYGS+QIQVLEGLDPVRKR
Sbjct: 36 RVGFQLRRVSNHFLIRNAASPRAFMSSSIATDAFQESTSSKAYGSEQIQVLEGLDPVRKR 95
Query: 1451 PGMYIGSTGPRGLHHLVYEILDNAVDEAQAGFASKIHVVLHADDSVSITDNGRGIPTDLH 1272
PGMYIGSTG RGLHHLVYEILDNA+DEAQAGFASK+ VVL ADDSVSITDNGRGIPT+LH
Sbjct: 96 PGMYIGSTGLRGLHHLVYEILDNAIDEAQAGFASKVDVVLLADDSVSITDNGRGIPTELH 155
Query: 1271 PVTNKSALETVLTVLHAGGKFGGANXXXXXXXXXXXXXXXXVNALSEELEITVWRDGLEY 1092
PVT KS+LETVLTVLHAGGKFGGA+ VNALSE LE+TVWRDG+EY
Sbjct: 156 PVTKKSSLETVLTVLHAGGKFGGASSGYSVSGGLHGVGLSVVNALSEALEVTVWRDGMEY 215
Query: 1091 MQRYSRGKPVTILKSLVLPVEKKDRQGTQIRFWPDKEVFTTAIQFDYNTIAGRIRELAFL 912
Q+YSRGKPVT L VLP E D QGT IRFWPDKEVFTT IQFDYNTIAGRIRELAFL
Sbjct: 216 QQKYSRGKPVTSLTHRVLPTESTDLQGTHIRFWPDKEVFTTEIQFDYNTIAGRIRELAFL 275
Query: 911 NPKLTITLRKEDNDPEKTQYNEYFYAGGLVEYVKWLNTDKKALHDVLSFRKEMDGIAIDI 732
NP+L ITLRKED DPEK QYNEY YAGGLVEYV+WLNTDKK +HDV+ FRK DGI+ID+
Sbjct: 276 NPELAITLRKEDKDPEKNQYNEYCYAGGLVEYVRWLNTDKKPVHDVVGFRKVADGISIDV 335
Query: 731 ALQWCEDAYSDTILGYANSIRTIDGGTHIDGMKASLTRTLNNLGKKSKIIKEKDITLSGE 552
ALQWC DAYSDT+LGYANSIRTIDGGTHIDGMKASLTRTLNNLGKKSKIIKEKDITLSGE
Sbjct: 336 ALQWCSDAYSDTMLGYANSIRTIDGGTHIDGMKASLTRTLNNLGKKSKIIKEKDITLSGE 395
Query: 551 HVREGLTCVVSVKVPNPEFEGQTKTRLGNPEVRKVVDQSIQEYLTEYLELHPDVLDSVLS 372
HVREGLTCV+SVKVPNPEFEGQTKTRLGNPEVRKVVDQ++QE+LTEYLELHPDVLD +LS
Sbjct: 396 HVREGLTCVISVKVPNPEFEGQTKTRLGNPEVRKVVDQTVQEFLTEYLELHPDVLDLILS 455
Query: 371 XXXXXXXXXXXXXXXXXXXRQKSVLRSSSLPGKLADCSSTNPEECEIFIVEGDSAGGSAK 192
RQKSVL+SSSLPGKLADCSSTNPEE EIFIVEGDSAGGSAK
Sbjct: 456 KSLNALKAALAAKRARELVRQKSVLKSSSLPGKLADCSSTNPEESEIFIVEGDSAGGSAK 515
Query: 191 QGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLILGLGLGVKGEDFKKDALRYHKI 12
QGRDRRFQAILPLRGKILN+ERKDEAAMYK+EEIQNLILGLGLGVKGEDFKK+ALRYHKI
Sbjct: 516 QGRDRRFQAILPLRGKILNIERKDEAAMYKSEEIQNLILGLGLGVKGEDFKKEALRYHKI 575
Query: 11 IIL 3
IIL
Sbjct: 576 IIL 578