BLASTX nr result

ID: Glycyrrhiza23_contig00017413 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00017413
         (757 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003543846.1| PREDICTED: pleiotropic regulator 1-like [Gly...   405   e-111
emb|CBI22162.3| unnamed protein product [Vitis vinifera]              371   e-100
emb|CAN79923.1| hypothetical protein VITISV_042443 [Vitis vinifera]   371   e-100
ref|XP_003554878.1| PREDICTED: nuclear distribution protein PAC1...   369   e-100
ref|XP_002324039.1| f-box family protein [Populus trichocarpa] g...   367   1e-99

>ref|XP_003543846.1| PREDICTED: pleiotropic regulator 1-like [Glycine max]
          Length = 501

 Score =  405 bits (1042), Expect = e-111
 Identities = 208/268 (77%), Positives = 226/268 (84%), Gaps = 17/268 (6%)
 Frame = +3

Query: 3   LLLHQNRIFFTQ-GSIVEIIDLDG-YQKGGKGFVHTLSDHKARITCMRLF---------- 146
           LLLH+N +F++Q GS VE+IDLDG  ++    F H+L  HKARITCMRLF          
Sbjct: 114 LLLHKNHLFYSQQGSRVEVIDLDGCLKRTTTDFFHSLCYHKARITCMRLFPLNEMTSVFR 173

Query: 147 --SQGEQNVLVTSSCDHSIRLWWKGSCLRCLRGHNGPVLSLSNKLLGDDSSKVLASGGED 320
             +QGEQNVLVTSSCDHSIRLWWKGS LRC RGHNGPVLSLSNKLLG+D SKVLASGGED
Sbjct: 174 GDTQGEQNVLVTSSCDHSIRLWWKGSSLRCFRGHNGPVLSLSNKLLGEDGSKVLASGGED 233

Query: 321 GTVRLWSLSSSGKRGQHALKATLYGHEKPVNLMSVSGHKTSLLVTIARDSKVRVWDTATA 500
           GTVRLWSL SSGKRGQ ALKAT YGHEKPVNLMSV+GHKTSLLVTI+RDSKVRVWDT TA
Sbjct: 234 GTVRLWSLGSSGKRGQRALKATFYGHEKPVNLMSVAGHKTSLLVTISRDSKVRVWDTGTA 293

Query: 501 SSVC---SCCVGMTSVPGAPVNMKCHESLLYVASGSSVTAVDLRTMQKVMTAAVHQPKLY 671
           +S     SCCVGM SVPG P+NMKCHESLLYVA+GSSV A DLRTMQKV+TAAVHQPKL 
Sbjct: 294 TSSAVRTSCCVGMASVPGTPLNMKCHESLLYVAAGSSVAAFDLRTMQKVITAAVHQPKLC 353

Query: 672 SFDAVPSKSLICTGGDGRAMLWDIRRNQ 755
           SFDAVPSK LICTGG+GRAMLWD+RRNQ
Sbjct: 354 SFDAVPSKYLICTGGNGRAMLWDVRRNQ 381


>emb|CBI22162.3| unnamed protein product [Vitis vinifera]
          Length = 491

 Score =  371 bits (952), Expect = e-100
 Identities = 187/263 (71%), Positives = 220/263 (83%), Gaps = 12/263 (4%)
 Frame = +3

Query: 3   LLLHQNRIFFTQGSIVEIIDLDGYQKGGKGFVHTLSDHKARITCMRLF-----------S 149
           LL   N I F+QGS+++I+ + G    G+ FV TL+DH ARITCMRLF           +
Sbjct: 104 LLDKNNDIIFSQGSVIQIMKM-GSIFSGRDFVVTLNDHNARITCMRLFPLSETSLFRSET 162

Query: 150 QGEQNVLVTSSCDHSIRLWWKGSCLRCLRGHNGPVLSLSNKLLGDDSSKVLASGGEDGTV 329
           Q E+NVLVTSSCDHSIRLWWKGSC RC RGHNGPV +LS+KLLGD S KV ASGGEDGTV
Sbjct: 163 QREENVLVTSSCDHSIRLWWKGSCQRCFRGHNGPVSTLSDKLLGDGSGKVFASGGEDGTV 222

Query: 330 RLWSLSSSGKRGQHALKATLYGHEKPVNLMSVSGHKTSLLVTIARDSKVRVWDTATASSV 509
           RLWSLSSSGKRGQ ALKATLYGH KPV LM+V+GHKTSLLVTI++DSKVRVWDT T+S+V
Sbjct: 223 RLWSLSSSGKRGQQALKATLYGHAKPVKLMTVAGHKTSLLVTISKDSKVRVWDTTTSSAV 282

Query: 510 -CSCCVGMTSVPGAPVNMKCHESLLYVASGSSVTAVDLRTMQKVMTAAVHQPKLYSFDAV 686
             SCCVGMTSV GAPV+MKC+ESLL+VA+GSSV+ +DLRTMQ+V+TAA+ Q ++YSFD +
Sbjct: 283 RSSCCVGMTSVLGAPVDMKCYESLLFVAAGSSVSTIDLRTMQRVITAAIGQHEVYSFDIL 342

Query: 687 PSKSLICTGGDGRAMLWDIRRNQ 755
           PSKSLICTGGDG+AMLWDIR++Q
Sbjct: 343 PSKSLICTGGDGKAMLWDIRKSQ 365


>emb|CAN79923.1| hypothetical protein VITISV_042443 [Vitis vinifera]
          Length = 491

 Score =  371 bits (952), Expect = e-100
 Identities = 187/263 (71%), Positives = 220/263 (83%), Gaps = 12/263 (4%)
 Frame = +3

Query: 3   LLLHQNRIFFTQGSIVEIIDLDGYQKGGKGFVHTLSDHKARITCMRLF-----------S 149
           LL   N I F+QGS+++I+ + G    G+ FV TL+DH ARITCMRLF           +
Sbjct: 104 LLDKNNDIIFSQGSVIQIMKM-GSIFSGRDFVVTLNDHNARITCMRLFPLSETSLFRSET 162

Query: 150 QGEQNVLVTSSCDHSIRLWWKGSCLRCLRGHNGPVLSLSNKLLGDDSSKVLASGGEDGTV 329
           Q E+NVLVTSSCDHSIRLWWKGSC RC RGHNGPV +LS+KLLGD S KV ASGGEDGTV
Sbjct: 163 QREENVLVTSSCDHSIRLWWKGSCQRCFRGHNGPVSTLSDKLLGDGSGKVFASGGEDGTV 222

Query: 330 RLWSLSSSGKRGQHALKATLYGHEKPVNLMSVSGHKTSLLVTIARDSKVRVWDTATASSV 509
           RLWSLSSSGKRGQ ALKATLYGH KPV LM+V+GHKTSLLVTI++DSKVRVWDT T+S+V
Sbjct: 223 RLWSLSSSGKRGQQALKATLYGHAKPVKLMTVAGHKTSLLVTISKDSKVRVWDTTTSSAV 282

Query: 510 -CSCCVGMTSVPGAPVNMKCHESLLYVASGSSVTAVDLRTMQKVMTAAVHQPKLYSFDAV 686
             SCCVGMTSV GAPV+MKC+ESLL+VA+GSSV+ +DLRTMQ+V+TAA+ Q ++YSFD +
Sbjct: 283 RSSCCVGMTSVLGAPVDMKCYESLLFVAAGSSVSTIDLRTMQRVITAAIGQHEVYSFDIL 342

Query: 687 PSKSLICTGGDGRAMLWDIRRNQ 755
           PSKSLICTGGDG+AMLWDIR++Q
Sbjct: 343 PSKSLICTGGDGKAMLWDIRKSQ 365


>ref|XP_003554878.1| PREDICTED: nuclear distribution protein PAC1-like [Glycine max]
          Length = 452

 Score =  369 bits (946), Expect = e-100
 Identities = 191/244 (78%), Positives = 206/244 (84%), Gaps = 4/244 (1%)
 Frame = +3

Query: 36  QGSIVEIIDLDGYQKGGKG-FVHTLSDHKARITCMRLFSQGEQNVLVTSSCDHSIRLWWK 212
           QGS VE+IDLDG  K     F H+L       +  R  +QGE+NVLVTSSCDHSIRLWWK
Sbjct: 88  QGSCVEMIDLDGCPKRTSAHFFHSLFPLNEMTSVFRGDTQGEKNVLVTSSCDHSIRLWWK 147

Query: 213 GSCLRCLRGHNGPVLSLSNKLLGDDSSKVLASGGEDGTVRLWSLSSSGKRGQHALKATLY 392
           GS LRC RGHNGPVLSLSNKLLG+D  KVLASGGEDGTVRLWSL SSGKRGQ ALKATLY
Sbjct: 148 GSSLRCFRGHNGPVLSLSNKLLGEDGRKVLASGGEDGTVRLWSLGSSGKRGQLALKATLY 207

Query: 393 GHEKPVNLMSVSGHKTSLLVTIARDSKVRVWDT--ATASSV-CSCCVGMTSVPGAPVNMK 563
           GHEKPVNLMSV+GHKTSLLV+I+RDSKV VWDT  AT+S+V  SCCVGM SVPG PVNMK
Sbjct: 208 GHEKPVNLMSVAGHKTSLLVSISRDSKVSVWDTGAATSSAVRTSCCVGMASVPGTPVNMK 267

Query: 564 CHESLLYVASGSSVTAVDLRTMQKVMTAAVHQPKLYSFDAVPSKSLICTGGDGRAMLWDI 743
           CHESLLYVA+GSS TA DLRTMQKV+TAAVHQPKL SFDA+PSK LI TGGDGRAMLWD+
Sbjct: 268 CHESLLYVAAGSSATAFDLRTMQKVITAAVHQPKLCSFDAIPSKYLIRTGGDGRAMLWDV 327

Query: 744 RRNQ 755
           RRNQ
Sbjct: 328 RRNQ 331


>ref|XP_002324039.1| f-box family protein [Populus trichocarpa]
           gi|222867041|gb|EEF04172.1| f-box family protein
           [Populus trichocarpa]
          Length = 498

 Score =  367 bits (943), Expect = 1e-99
 Identities = 188/267 (70%), Positives = 219/267 (82%), Gaps = 16/267 (5%)
 Frame = +3

Query: 3   LLLHQNRIFFTQGS----IVEIIDLDGYQKGGKGFVHTLSDHKARITCMRLF-------- 146
           ++L +N I F+QGS    +V++ ++D +  G  G V  LSDH ARITCMRLF        
Sbjct: 107 IILDKNDISFSQGSYPGSLVQMTNIDSFLNGRDG-VTALSDHNARITCMRLFPLSETSLF 165

Query: 147 ---SQGEQNVLVTSSCDHSIRLWWKGSCLRCLRGHNGPVLSLSNKLLGDDSSKVLASGGE 317
              +Q ++NVLVTSSCDHSIRLWWKGSC RC RGHNGPVL+LS+KLLGD S+KVLASGGE
Sbjct: 166 RSETQRKENVLVTSSCDHSIRLWWKGSCQRCFRGHNGPVLTLSDKLLGDGSAKVLASGGE 225

Query: 318 DGTVRLWSLSSSGKRGQHALKATLYGHEKPVNLMSVSGHKTSLLVTIARDSKVRVWDTAT 497
           DGTVRLWSLSSSGKRGQHALKATLYGHEKP+ LMSV+GH+TSLL TI++DSKVRVWDT T
Sbjct: 226 DGTVRLWSLSSSGKRGQHALKATLYGHEKPIKLMSVAGHRTSLLATISKDSKVRVWDTTT 285

Query: 498 ASSV-CSCCVGMTSVPGAPVNMKCHESLLYVASGSSVTAVDLRTMQKVMTAAVHQPKLYS 674
           +S+V  SCCVGMTSVPGAPV++KC ESLLYVA+GSSV A+DLRTMQKV+T A++QPKL S
Sbjct: 286 SSAVRSSCCVGMTSVPGAPVDVKCCESLLYVAAGSSVVAIDLRTMQKVITVAIYQPKLCS 345

Query: 675 FDAVPSKSLICTGGDGRAMLWDIRRNQ 755
           F  VPSK LICTGG  +A LWDIR NQ
Sbjct: 346 FAIVPSKPLICTGGIDKAKLWDIRINQ 372


Top