BLASTX nr result

ID: Glycyrrhiza23_contig00017385 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00017385
         (569 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003630102.1| F-box protein SKIP19 [Medicago truncatula] g...   143   2e-32
ref|XP_003590154.1| F-box protein SKIP19 [Medicago truncatula] g...   139   4e-31
ref|XP_003612694.1| F-box protein SKIP19 [Medicago truncatula] g...   130   1e-28
ref|XP_003601400.1| N7 protein [Medicago truncatula] gi|35549044...   125   5e-27
ref|XP_003600731.1| F-box protein SKIP19 [Medicago truncatula] g...   125   5e-27

>ref|XP_003630102.1| F-box protein SKIP19 [Medicago truncatula]
           gi|355524124|gb|AET04578.1| F-box protein SKIP19
           [Medicago truncatula]
          Length = 307

 Score =  143 bits (360), Expect = 2e-32
 Identities = 78/155 (50%), Positives = 103/155 (66%), Gaps = 9/155 (5%)
 Frame = +1

Query: 130 SCSSSPAKRLKGESTTRDPNWHELPRDVTANILHRLDILERVRSARRVCSEWRNIFKDPL 309
           S S +PAK+ K E  T +PNW ELP+D+T+NIL RL  +E + +AR VC  W NI KDP 
Sbjct: 2   SSSPNPAKKPKLEIITTNPNWLELPKDLTSNILKRLGAVEILTNARNVCPYWWNICKDPF 61

Query: 310 MWHSIDM-SFH-YSLWG-------DYLVDICRYAVGQSDGHVENIDIDDFATDDLLKYIA 462
           MW  I M +FH Y  +        DYLV +C+YAV  S GH+E IDI  F +D LL+YIA
Sbjct: 62  MWREIQMGTFHLYFQYANADAPDLDYLVKLCQYAVDLSSGHLEKIDIYRFGSDHLLQYIA 121

Query: 463 NSASHLRCMRLGNCHKISDKGLSEFIKKAPLLEEL 567
           + AS+LR ++L +C ++SD+G  E  KK PLLEE+
Sbjct: 122 DRASNLRHIQLASCMRVSDEGWCEAAKKFPLLEEI 156


>ref|XP_003590154.1| F-box protein SKIP19 [Medicago truncatula]
           gi|355479202|gb|AES60405.1| F-box protein SKIP19
           [Medicago truncatula]
          Length = 285

 Score =  139 bits (349), Expect = 4e-31
 Identities = 77/156 (49%), Positives = 99/156 (63%), Gaps = 8/156 (5%)
 Frame = +1

Query: 124 MASCSSSPAKRLKGESTTRDPNWHELPRDVTANILHRLDILERVRSARRVCSEWRNIFKD 303
           M + SS P+  ++ EST  +PNW ELP+D+  NIL RLD +E V S  +VC  W NI KD
Sbjct: 1   MTASSSIPSTGVERESTAAEPNWLELPKDLAINILQRLDTIEIVTSVCQVCPLWWNICKD 60

Query: 304 PLMWHSIDM----SFHYSLWGDY-LVDICRYAVGQSDGHVENIDIDDFATDDLLKYIANS 468
           PLMW +I M     +HY  W    L  ICRYAV +S G ++ IDI+ F TDDL KYIA+ 
Sbjct: 61  PLMWRTISMIKSSHYHYPEWLHMDLEMICRYAVERSCGQLQEIDIEFFLTDDLFKYIADC 120

Query: 469 ASHLRCMRLGNC---HKISDKGLSEFIKKAPLLEEL 567
           ASHLRC+RL  C     +S+KG    +KK  ++EEL
Sbjct: 121 ASHLRCIRLVACDAADNLSEKGFIGGMKKLSMIEEL 156


>ref|XP_003612694.1| F-box protein SKIP19 [Medicago truncatula]
           gi|355514029|gb|AES95652.1| F-box protein SKIP19
           [Medicago truncatula]
          Length = 321

 Score =  130 bits (328), Expect = 1e-28
 Identities = 69/148 (46%), Positives = 93/148 (62%)
 Frame = +1

Query: 124 MASCSSSPAKRLKGESTTRDPNWHELPRDVTANILHRLDILERVRSARRVCSEWRNIFKD 303
           MASCS S   R  G  +   PNW ELP D+  NIL RLD ++ V++A  VC  W +I KD
Sbjct: 1   MASCSISA--RETGSESATVPNWLELPTDIITNILRRLDTIDIVKNACIVCPLWWSICKD 58

Query: 304 PLMWHSIDMSFHYSLWGDYLVDICRYAVGQSDGHVENIDIDDFATDDLLKYIANSASHLR 483
           PLMW +I M    S +     +IC YAV +S GH+E I ++ FATD+LL++I  + ++LR
Sbjct: 59  PLMWRTIRMIGERSYFNANFPEICHYAVERSCGHLEEISVEYFATDELLEFIVENGTNLR 118

Query: 484 CMRLGNCHKISDKGLSEFIKKAPLLEEL 567
           CMRL  C  ISD+G  + ++K   LEEL
Sbjct: 119 CMRLVECQYISDEGFCKAVRKLLQLEEL 146


>ref|XP_003601400.1| N7 protein [Medicago truncatula] gi|355490448|gb|AES71651.1| N7
           protein [Medicago truncatula]
          Length = 258

 Score =  125 bits (314), Expect = 5e-27
 Identities = 71/140 (50%), Positives = 91/140 (65%), Gaps = 4/140 (2%)
 Frame = +1

Query: 160 KGESTTRDPNWHELPRDVTANILHRLDILERVRSARRVCSEWRNIFKDPLMWHSIDMSF- 336
           + ESTT  PNW +LP D+T NIL RL   E V SA RVC +W NI KDPLMW  I MS+ 
Sbjct: 4   ESESTT-GPNWLDLPSDLTENILQRLGTFEIVTSACRVCPQWLNICKDPLMWCIIHMSYV 62

Query: 337 ---HYSLWGDYLVDICRYAVGQSDGHVENIDIDDFATDDLLKYIANSASHLRCMRLGNCH 507
               Y+     LV IC   + +S GH+ENIDI+ + T+D LK IA++ SHLRCM L +C 
Sbjct: 63  RKSPYAFQN--LVKICCNVIKRSCGHLENIDIEYYCTNDTLKCIADNGSHLRCMWLVSCL 120

Query: 508 KISDKGLSEFIKKAPLLEEL 567
            I++KG SE ++K P L E+
Sbjct: 121 GITNKGFSEAVRKLPRLGEV 140


>ref|XP_003600731.1| F-box protein SKIP19 [Medicago truncatula]
           gi|355489779|gb|AES70982.1| F-box protein SKIP19
           [Medicago truncatula]
          Length = 273

 Score =  125 bits (314), Expect = 5e-27
 Identities = 77/147 (52%), Positives = 93/147 (63%)
 Frame = +1

Query: 124 MASCSSSPAKRLKGESTTRDPNWHELPRDVTANILHRLDILERVRSARRVCSEWRNIFKD 303
           MAS SS P K LK +S    PNW ELPRD+T NIL  +D +E V +A  VC    NI KD
Sbjct: 1   MAS-SSFPEKELKRDS----PNWLELPRDITINILQGVDTVEIVTNACLVCPLSWNICKD 55

Query: 304 PLMWHSIDMSFHYSLWGDYLVDICRYAVGQSDGHVENIDIDDFATDDLLKYIANSASHLR 483
           PLMW +I M  HY+       D+  +   +S G +E+IDI  FA DDLLK+IA +ASHLR
Sbjct: 56  PLMWRTIHMITHYNSPKLLREDLPVFQ--RSCGQLEDIDIHCFANDDLLKFIAENASHLR 113

Query: 484 CMRLGNCHKISDKGLSEFIKKAPLLEE 564
           CM L +C  ISDKG  E  KK PLLE+
Sbjct: 114 CMWLADCRGISDKGFIEVAKKFPLLEK 140


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