BLASTX nr result

ID: Glycyrrhiza23_contig00017384 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00017384
         (353 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003521411.1| PREDICTED: putative pentatricopeptide repeat...   122   2e-26
emb|CAN66059.1| hypothetical protein VITISV_017037 [Vitis vinifera]    97   2e-18
ref|XP_004143391.1| PREDICTED: putative pentatricopeptide repeat...    96   3e-18
emb|CBI30347.3| unnamed protein product [Vitis vinifera]               96   3e-18
ref|XP_002275884.1| PREDICTED: putative pentatricopeptide repeat...    96   3e-18

>ref|XP_003521411.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g37570-like [Glycine max]
          Length = 566

 Score =  122 bits (307), Expect = 2e-26
 Identities = 66/117 (56%), Positives = 75/117 (64%)
 Frame = +1

Query: 1   VHACIIQRGLEQDHFLISHFIXXXXXXXXXXXXXXXXXXVFDRVLTPNTFLWNTLIRTHC 180
           VHACII RGLEQDHFL+  FI                  VF RVL P+T LWNTLI++HC
Sbjct: 48  VHACIIHRGLEQDHFLVFLFISRAHTLLSTLSYASS---VFHRVLAPSTVLWNTLIKSHC 104

Query: 181 HNSNFSETLSAFIRMKKNASSEDGSLPDRYTYPSVIKACSVMCWGNEGKSVHGSALR 351
             + FS TLSAF RMK +     G+LPD +TYPSVIKACS  C   EGKS+HGSA R
Sbjct: 105 QKNLFSHTLSAFARMKAH-----GALPDSFTYPSVIKACSGTCKAREGKSLHGSAFR 156


>emb|CAN66059.1| hypothetical protein VITISV_017037 [Vitis vinifera]
          Length = 546

 Score = 96.7 bits (239), Expect = 2e-18
 Identities = 53/117 (45%), Positives = 73/117 (62%)
 Frame = +1

Query: 1   VHACIIQRGLEQDHFLISHFIXXXXXXXXXXXXXXXXXXVFDRVLTPNTFLWNTLIRTHC 180
           VHA II++GL QDHFLIS F+                  VF+ V +P+T LWNT I+ + 
Sbjct: 44  VHARIIRKGLHQDHFLISQFLTLCNSLSNFSYTTS----VFNGVSSPSTVLWNTYIKGYS 99

Query: 181 HNSNFSETLSAFIRMKKNASSEDGSLPDRYTYPSVIKACSVMCWGNEGKSVHGSALR 351
            N + S T+S FIRMK++      ++PD++TYPS+IKACS +C   EG + HGSA+R
Sbjct: 100 ENYSVSLTVSLFIRMKRS-----DAVPDKFTYPSLIKACSKVCGVKEGVAFHGSAVR 151


>ref|XP_004143391.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g37570-like [Cucumis sativus]
           gi|449519310|ref|XP_004166678.1| PREDICTED: putative
           pentatricopeptide repeat-containing protein
           At5g37570-like [Cucumis sativus]
          Length = 565

 Score = 95.9 bits (237), Expect = 3e-18
 Identities = 52/117 (44%), Positives = 73/117 (62%)
 Frame = +1

Query: 1   VHACIIQRGLEQDHFLISHFIXXXXXXXXXXXXXXXXXXVFDRVLTPNTFLWNTLIRTHC 180
           VHA +IQ+GLEQD FL++ FI                  VFDRVL+P+TFLWN+L+  +C
Sbjct: 48  VHAHLIQKGLEQDSFLVTQFISASNSVAHISYSTS----VFDRVLSPSTFLWNSLVSGYC 103

Query: 181 HNSNFSETLSAFIRMKKNASSEDGSLPDRYTYPSVIKACSVMCWGNEGKSVHGSALR 351
               F + +S ++RMK+    EDG+ PDRYT+PS++K C+      EG ++HGS LR
Sbjct: 104 AKLQFVDIISLYVRMKR----EDGA-PDRYTFPSLLKVCASEGKMMEGMALHGSILR 155


>emb|CBI30347.3| unnamed protein product [Vitis vinifera]
          Length = 560

 Score = 95.9 bits (237), Expect = 3e-18
 Identities = 52/117 (44%), Positives = 73/117 (62%)
 Frame = +1

Query: 1   VHACIIQRGLEQDHFLISHFIXXXXXXXXXXXXXXXXXXVFDRVLTPNTFLWNTLIRTHC 180
           VHA II++GL QDHF+IS F+                  VF+ V +P+T LWNT I+ + 
Sbjct: 92  VHARIIRKGLHQDHFIISQFLTLCNSLSNFSYTTS----VFNGVSSPSTVLWNTYIKGYS 147

Query: 181 HNSNFSETLSAFIRMKKNASSEDGSLPDRYTYPSVIKACSVMCWGNEGKSVHGSALR 351
            N + S T+S FIRMK++      ++PD++TYPS+IKACS +C   EG + HGSA+R
Sbjct: 148 ENYSVSLTVSLFIRMKRS-----DAVPDKFTYPSLIKACSKVCGVKEGVAFHGSAVR 199


>ref|XP_002275884.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g37570 [Vitis vinifera]
          Length = 561

 Score = 95.9 bits (237), Expect = 3e-18
 Identities = 52/117 (44%), Positives = 73/117 (62%)
 Frame = +1

Query: 1   VHACIIQRGLEQDHFLISHFIXXXXXXXXXXXXXXXXXXVFDRVLTPNTFLWNTLIRTHC 180
           VHA II++GL QDHF+IS F+                  VF+ V +P+T LWNT I+ + 
Sbjct: 44  VHARIIRKGLHQDHFIISQFLTLCNSLSNFSYTTS----VFNGVSSPSTVLWNTYIKGYS 99

Query: 181 HNSNFSETLSAFIRMKKNASSEDGSLPDRYTYPSVIKACSVMCWGNEGKSVHGSALR 351
            N + S T+S FIRMK++      ++PD++TYPS+IKACS +C   EG + HGSA+R
Sbjct: 100 ENYSVSLTVSLFIRMKRS-----DAVPDKFTYPSLIKACSKVCGVKEGVAFHGSAVR 151


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