BLASTX nr result

ID: Glycyrrhiza23_contig00017339 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00017339
         (644 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003603080.1| Protein ssh4 [Medicago truncatula] gi|355492...   162   7e-38
ref|XP_003545323.1| PREDICTED: uncharacterized protein LOC100788...   127   1e-27
ref|XP_002510180.1| conserved hypothetical protein [Ricinus comm...   100   2e-19
ref|XP_002326948.1| predicted protein [Populus trichocarpa] gi|2...    98   2e-18
ref|XP_003589150.1| Protein ssh4 [Medicago truncatula] gi|355478...    95   1e-17

>ref|XP_003603080.1| Protein ssh4 [Medicago truncatula] gi|355492128|gb|AES73331.1|
           Protein ssh4 [Medicago truncatula]
          Length = 469

 Score =  162 bits (409), Expect = 7e-38
 Identities = 89/151 (58%), Positives = 107/151 (70%), Gaps = 3/151 (1%)
 Frame = +3

Query: 198 MWIHVALIASAVGCVATILLIFIWRRWCHHRKRRNFVEPATTTQTRNQSSRLHPQ-PSVH 374
           MW+H+A+IAS VGCV+TILLI I+RRWCH R RRN VEP       N  +R+H   PSVH
Sbjct: 1   MWVHIAVIASTVGCVSTILLILIYRRWCHRRNRRNSVEPG-----ENSRNRIHNHMPSVH 55

Query: 375 HHQLMNQGSKNKGNHNHYAFRGGGVSAKRT--LFNWGDNPSMASDAVENGWSRFAFTSYK 548
           H   + QGS    N+N+  FR   VS KRT  LF+W +NPSMA+DAVENGWSRFAFTSYK
Sbjct: 56  HQ--LEQGSNK--NNNNSLFRSY-VSGKRTTNLFSWIENPSMAADAVENGWSRFAFTSYK 110

Query: 549 SYVPSLSKRASLLGVCAAPTGDSGREQQQQQ 641
           SY+PS SK+ +LLG C AP GD  RE  + +
Sbjct: 111 SYMPSPSKKVTLLGSC-APVGDYRRESSEAE 140


>ref|XP_003545323.1| PREDICTED: uncharacterized protein LOC100788520 [Glycine max]
          Length = 465

 Score =  127 bits (320), Expect = 1e-27
 Identities = 69/137 (50%), Positives = 95/137 (69%), Gaps = 4/137 (2%)
 Frame = +3

Query: 204 IHVALIASAVGCVATILLIFIWRRWCHHRKR-RNFVEPATTTQTRNQSS---RLHPQPSV 371
           IHVA++A+++GCV+T+LL+FIWR  CHH+K  ++FVE    T+  +  +   RLH QPS+
Sbjct: 5   IHVAVVAASLGCVSTLLLVFIWRL-CHHKKEHKDFVEANRITRMESLQAGIARLHQQPSI 63

Query: 372 HHHQLMNQGSKNKGNHNHYAFRGGGVSAKRTLFNWGDNPSMASDAVENGWSRFAFTSYKS 551
           +H    +  +KNKG    Y F  G VS +  LFNW D+P +  DAVENGWSRFAF++YKS
Sbjct: 64  YHQ--FDHKNKNKGKF--YVFHNG-VSRRGHLFNWDDHPYLVVDAVENGWSRFAFSNYKS 118

Query: 552 YVPSLSKRASLLGVCAA 602
            + S  KR++LLG CAA
Sbjct: 119 NMTSHLKRSTLLGACAA 135


>ref|XP_002510180.1| conserved hypothetical protein [Ricinus communis]
           gi|223550881|gb|EEF52367.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 480

 Score =  100 bits (250), Expect = 2e-19
 Identities = 62/148 (41%), Positives = 85/148 (57%), Gaps = 2/148 (1%)
 Frame = +3

Query: 201 WIHVALIASAVGCVATILLIFIWRRWCHHRKRRNFVEPATTTQTRNQS--SRLHPQPSVH 374
           W HV LIA  +  +A ++++ I RR C  + R   V+ A T   R Q   ++LH   +  
Sbjct: 4   WEHVVLIAIGIIVLAILIVVLIRRRLCFKQVRDVVVDTARTRPERLQDGIAKLHQGNNTS 63

Query: 375 HHQLMNQGSKNKGNHNHYAFRGGGVSAKRTLFNWGDNPSMASDAVENGWSRFAFTSYKSY 554
            H  +    K KGN+  Y FR G  +  R LF+W D+PS+ +DAVENGWSRF FT + S 
Sbjct: 64  LHHQLELDGKRKGNY--YVFRRGVPT--RPLFSWADHPSLITDAVENGWSRFGFTGFMS- 118

Query: 555 VPSLSKRASLLGVCAAPTGDSGREQQQQ 638
             S S R+SLLG+CA   GD GRE + +
Sbjct: 119 --SPSSRSSLLGLCA--VGDYGREAETE 142


>ref|XP_002326948.1| predicted protein [Populus trichocarpa] gi|222835263|gb|EEE73698.1|
           predicted protein [Populus trichocarpa]
          Length = 302

 Score = 97.8 bits (242), Expect = 2e-18
 Identities = 64/144 (44%), Positives = 86/144 (59%), Gaps = 3/144 (2%)
 Frame = +3

Query: 204 IHVALIASAVGCVATILLIFIWRRWCHHRKRRNFVEPATTTQTRNQS---SRLHPQPSVH 374
           IH      AV   + I  + +WR +C  + RR  V+P  T  T +     ++LH Q S+H
Sbjct: 5   IHFWWAGGAVVVGSMIFALAVWRCFCF-KDRRGTVDPLRTNGTSSLQDGIAKLH-QGSIH 62

Query: 375 HHQLMNQGSKNKGNHNHYAFRGGGVSAKRTLFNWGDNPSMASDAVENGWSRFAFTSYKSY 554
           H Q     +K +GN+  Y FR G   + R LFNW D+P++ +DAVENGWSRF FT   SY
Sbjct: 63  H-QPGQYETKRRGNY--YVFRRG--VSTRPLFNWADHPALITDAVENGWSRFCFT---SY 114

Query: 555 VPSLSKRASLLGVCAAPTGDSGRE 626
           +PS S R+S+LG+CAA  GD GRE
Sbjct: 115 MPSPSTRSSMLGLCAA--GDPGRE 136


>ref|XP_003589150.1| Protein ssh4 [Medicago truncatula] gi|355478198|gb|AES59401.1|
           Protein ssh4 [Medicago truncatula]
          Length = 446

 Score = 95.1 bits (235), Expect = 1e-17
 Identities = 59/153 (38%), Positives = 87/153 (56%), Gaps = 5/153 (3%)
 Frame = +3

Query: 195 SMWIHV--ALIASAVGCVATILLIF-IWRRWCHHRK-RRNFVEPATTTQTRNQSSRLHPQ 362
           S WIHV  A+IA+ VGC++T+L +F +W  +CHH+K ++ FVE  +  +  +Q       
Sbjct: 2   SQWIHVHVAIIAALVGCISTLLFVFMLW--FCHHKKDQKRFVESNSLNKRESQERNF--- 56

Query: 363 PSVHHHQLMNQGSKNKGNHNHYAFRGGGVSAKRTLFNWGDNPSMASDAVENGWSRFAFTS 542
                    +Q  K+KG              ++ LFNW D+P +ASDA+ENGWSRFAFTS
Sbjct: 57  ---------DQRRKSKG--------------RKDLFNWNDHPYLASDAIENGWSRFAFTS 93

Query: 543 YKSYVPS-LSKRASLLGVCAAPTGDSGREQQQQ 638
           Y S + S  S  ++LLG C   + + GRE + +
Sbjct: 94  YMSNISSKKSTSSTLLGSCGG-SDEFGRENEAE 125


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