BLASTX nr result

ID: Glycyrrhiza23_contig00017319 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00017319
         (638 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003612119.1| Zinc finger CCCH domain-containing protein [...   273   2e-71
ref|XP_003612118.1| Zinc finger CCCH domain-containing protein [...   273   2e-71
ref|XP_003538871.1| PREDICTED: zinc finger CCCH domain-containin...   270   2e-70
gb|AFK41084.1| unknown [Lotus japonicus]                              253   3e-65
ref|XP_003516552.1| PREDICTED: zinc finger CCCH domain-containin...   222   5e-56

>ref|XP_003612119.1| Zinc finger CCCH domain-containing protein [Medicago truncatula]
            gi|355513454|gb|AES95077.1| Zinc finger CCCH
            domain-containing protein [Medicago truncatula]
          Length = 1255

 Score =  273 bits (699), Expect = 2e-71
 Identities = 130/173 (75%), Positives = 142/173 (82%)
 Frame = -3

Query: 633  EHSSRSSEVEVGTKKIGVSGNQWDSGSGNSPIFPSAATLGMAIDTTWRLGSENTHLGWGG 454
            E SSR+S+V+VG+K I VS NQW+SGS NS IFP+ ATLGM +DTTWRLG E+THL WGG
Sbjct: 1083 ELSSRNSKVDVGSKNICVSTNQWESGSENSSIFPATATLGMTVDTTWRLGLESTHLEWGG 1142

Query: 453  MDQRNANTGWGVGQTAVHENRSSNSYTPIVTSGFGDSLTRYGSDRFSVPRDRGLPXXXXX 274
            MDQRNANT WGVG TAV+ENRSSNS T +VT  FGDS TRYGSDRFSVPRDRG P     
Sbjct: 1143 MDQRNANTSWGVGNTAVNENRSSNSCTSVVTPSFGDSQTRYGSDRFSVPRDRGFPGHGRE 1202

Query: 273  XXXXXXRTAWNRQPLFGVGNGGSYRPLPKGQRVCKFYESGYCKKGASCDYFHP 115
                  R AWNRQPLFGVGNG SYRPLPKGQRVCKFYESGYC+KGASC+YFHP
Sbjct: 1203 PGLVRGRAAWNRQPLFGVGNGISYRPLPKGQRVCKFYESGYCRKGASCEYFHP 1255


>ref|XP_003612118.1| Zinc finger CCCH domain-containing protein [Medicago truncatula]
            gi|355513453|gb|AES95076.1| Zinc finger CCCH
            domain-containing protein [Medicago truncatula]
          Length = 673

 Score =  273 bits (699), Expect = 2e-71
 Identities = 130/173 (75%), Positives = 142/173 (82%)
 Frame = -3

Query: 633  EHSSRSSEVEVGTKKIGVSGNQWDSGSGNSPIFPSAATLGMAIDTTWRLGSENTHLGWGG 454
            E SSR+S+V+VG+K I VS NQW+SGS NS IFP+ ATLGM +DTTWRLG E+THL WGG
Sbjct: 501  ELSSRNSKVDVGSKNICVSTNQWESGSENSSIFPATATLGMTVDTTWRLGLESTHLEWGG 560

Query: 453  MDQRNANTGWGVGQTAVHENRSSNSYTPIVTSGFGDSLTRYGSDRFSVPRDRGLPXXXXX 274
            MDQRNANT WGVG TAV+ENRSSNS T +VT  FGDS TRYGSDRFSVPRDRG P     
Sbjct: 561  MDQRNANTSWGVGNTAVNENRSSNSCTSVVTPSFGDSQTRYGSDRFSVPRDRGFPGHGRE 620

Query: 273  XXXXXXRTAWNRQPLFGVGNGGSYRPLPKGQRVCKFYESGYCKKGASCDYFHP 115
                  R AWNRQPLFGVGNG SYRPLPKGQRVCKFYESGYC+KGASC+YFHP
Sbjct: 621  PGLVRGRAAWNRQPLFGVGNGISYRPLPKGQRVCKFYESGYCRKGASCEYFHP 673


>ref|XP_003538871.1| PREDICTED: zinc finger CCCH domain-containing protein 44-like
            [Glycine max]
          Length = 1365

 Score =  270 bits (690), Expect = 2e-70
 Identities = 132/173 (76%), Positives = 139/173 (80%)
 Frame = -3

Query: 633  EHSSRSSEVEVGTKKIGVSGNQWDSGSGNSPIFPSAATLGMAIDTTWRLGSENTHLGWGG 454
            E SSRSS+VEVGTK  GVSGNQWDSGS NSPI PS  TLG+AIDTTWRLG ENTHLGW G
Sbjct: 1194 EDSSRSSKVEVGTKN-GVSGNQWDSGSENSPIVPSPGTLGLAIDTTWRLGLENTHLGWSG 1252

Query: 453  MDQRNANTGWGVGQTAVHENRSSNSYTPIVTSGFGDSLTRYGSDRFSVPRDRGLPXXXXX 274
            +DQ NAN GWGVGQTAV ENRSS+SYT  VT G GDS TRYGSDRFSV RDRG       
Sbjct: 1253 IDQGNANVGWGVGQTAVQENRSSSSYTSTVTPGLGDSQTRYGSDRFSVSRDRGFQGHGRE 1312

Query: 273  XXXXXXRTAWNRQPLFGVGNGGSYRPLPKGQRVCKFYESGYCKKGASCDYFHP 115
                  R  +NRQP +GVGNGGSYRPLPKGQRVCKFYESGYCKKGASCDY+HP
Sbjct: 1313 SGFSRSRIPYNRQPSYGVGNGGSYRPLPKGQRVCKFYESGYCKKGASCDYWHP 1365


>gb|AFK41084.1| unknown [Lotus japonicus]
          Length = 161

 Score =  253 bits (645), Expect = 3e-65
 Identities = 118/160 (73%), Positives = 124/160 (77%)
 Frame = -3

Query: 594 KKIGVSGNQWDSGSGNSPIFPSAATLGMAIDTTWRLGSENTHLGWGGMDQRNANTGWGVG 415
           K IGVSGNQW+SG+G+SPI P   TLGMAIDTTWRLG ENTHLGWGGMDQR  NT WGVG
Sbjct: 2   KNIGVSGNQWESGAGSSPIVPPTVTLGMAIDTTWRLGLENTHLGWGGMDQRETNTSWGVG 61

Query: 414 QTAVHENRSSNSYTPIVTSGFGDSLTRYGSDRFSVPRDRGLPXXXXXXXXXXXRTAWNRQ 235
           Q  VHENRS+NSYT +V  G GD  TRYGSDR+SVPRDR  P           RTA NRQ
Sbjct: 62  QMEVHENRSTNSYTSVVAPGLGDGQTRYGSDRYSVPRDRSFPGPGRESGFGRVRTASNRQ 121

Query: 234 PLFGVGNGGSYRPLPKGQRVCKFYESGYCKKGASCDYFHP 115
            LFGVGNGGSYRP PKGQRVCK YESGYCKKGASC Y HP
Sbjct: 122 SLFGVGNGGSYRPSPKGQRVCKLYESGYCKKGASCGYLHP 161


>ref|XP_003516552.1| PREDICTED: zinc finger CCCH domain-containing protein 44-like
            [Glycine max]
          Length = 1953

 Score =  222 bits (565), Expect = 5e-56
 Identities = 110/153 (71%), Positives = 119/153 (77%)
 Frame = -3

Query: 633  EHSSRSSEVEVGTKKIGVSGNQWDSGSGNSPIFPSAATLGMAIDTTWRLGSENTHLGWGG 454
            EH SRSS+VEVGTK  GVSGNQWDSGS NSPI PS  TLG+AIDTTWRLG ENTHLGW G
Sbjct: 1205 EHPSRSSKVEVGTKN-GVSGNQWDSGSENSPIVPSPGTLGLAIDTTWRLGLENTHLGWSG 1263

Query: 453  MDQRNANTGWGVGQTAVHENRSSNSYTPIVTSGFGDSLTRYGSDRFSVPRDRGLPXXXXX 274
            +DQ NAN GWGVGQTAV ENRSS+SYT  VT GFGDS T+YGSDRFSV RDRG       
Sbjct: 1264 IDQGNANVGWGVGQTAVQENRSSSSYTSAVTPGFGDSQTKYGSDRFSVSRDRGFQGHSRE 1323

Query: 273  XXXXXXRTAWNRQPLFGVGNGGSYRPLPKGQRV 175
                  R  +NRQP +GVGNG SY+PLPKGQR+
Sbjct: 1324 SGLSRSRIPYNRQPSYGVGNGASYKPLPKGQRL 1356


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