BLASTX nr result

ID: Glycyrrhiza23_contig00017318 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00017318
         (1151 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003593623.1| Zinc finger CCCH domain-containing protein [...   424   e-116
ref|XP_003547155.1| PREDICTED: zinc finger CCCH domain-containin...   418   e-114
ref|XP_002329830.1| predicted protein [Populus trichocarpa] gi|2...   240   6e-61
ref|XP_004155642.1| PREDICTED: uncharacterized protein LOC101231...   185   2e-44
ref|XP_004134949.1| PREDICTED: zinc finger CCCH domain-containin...   185   2e-44

>ref|XP_003593623.1| Zinc finger CCCH domain-containing protein [Medicago truncatula]
            gi|355482671|gb|AES63874.1| Zinc finger CCCH
            domain-containing protein [Medicago truncatula]
          Length = 892

 Score =  424 bits (1091), Expect = e-116
 Identities = 220/298 (73%), Positives = 248/298 (83%), Gaps = 6/298 (2%)
 Frame = +2

Query: 2    SERDDLPLVGTSRVPPHSTGYISKIRSYDWEPSVPFRPSFFITSMNVSSPGNLYDPLRDS 181
            S+R+D  LVG+SRV PH+ GY  K RS +WEPSVPFRPSFFITSMNVSSP +LYDPLR+S
Sbjct: 596  SDREDFHLVGSSRVAPHANGYTLKTRS-NWEPSVPFRPSFFITSMNVSSPRDLYDPLRNS 654

Query: 182  IEIPNIGDGSLKASLLIQGSSIQASSQVRTYGDSAVVGKHISDLNDEKSSVSSH----EN 349
            IEIPNIGDGSLKASLLI+GSS+QASSQVRTY DSA VGK +SD+ND+KSSVSSH    EN
Sbjct: 655  IEIPNIGDGSLKASLLIRGSSVQASSQVRTYDDSAAVGKQMSDVNDDKSSVSSHHKFYEN 714

Query: 350  EPYKNSVLREKDCLATETETTSGT--NYQNGKVGVGQHTFSVEDIMKREKKRTEHDARHH 523
            EP ++SV R KDCLAT+ E TSGT  NYQNG +GVGQ+ F VED ++  KKRTEHDARHH
Sbjct: 715  EPNRSSVPRGKDCLATKAEITSGTCANYQNGDIGVGQYAFGVEDRIETLKKRTEHDARHH 774

Query: 524  GEGSRLKKKREGKDKNINEMEVDFQMDSSVNKETKVLRNFRAALVDLVKELLKPSWHEGR 703
             + S  KK R  KD   +EMEVDFQ D SV KETK L+ F A LVDLVKELLKP WHEGR
Sbjct: 775  SDESEHKKNRVAKDNKFHEMEVDFQTDGSVLKETKTLKIFHAVLVDLVKELLKPFWHEGR 834

Query: 704  LSKDAHIMIVKKSVDKVVSTLEPHQIPTTEDSAQQYVSSCRMKIAKLVNGYVNKYGKS 877
            LSKDAHI+IVKKSVDKV+STLEP QIPTTED+A+QYVS CR KIAKLV+GYVNK+GKS
Sbjct: 835  LSKDAHILIVKKSVDKVISTLEPRQIPTTEDTAKQYVSLCRPKIAKLVHGYVNKHGKS 892


>ref|XP_003547155.1| PREDICTED: zinc finger CCCH domain-containing protein 27-like
            [Glycine max]
          Length = 713

 Score =  418 bits (1075), Expect = e-114
 Identities = 220/295 (74%), Positives = 246/295 (83%), Gaps = 4/295 (1%)
 Frame = +2

Query: 2    SERDDLPLVGTSRVPPHSTGYISKIRSYDWEPSVPFRPSFFITSMNVSSPGNLYDPLRDS 181
            S R+D  LV +SRVP +  GY SKI SYDWEPSVPFRPSFFITSMNVSSPG+LYDPLRDS
Sbjct: 421  SGREDFSLVSSSRVPSYPAGYKSKICSYDWEPSVPFRPSFFITSMNVSSPGDLYDPLRDS 480

Query: 182  IEIPNIGDGSLKASLLIQGSSIQASSQVRTYGDSAVVGKHISDLNDEKSSVSSH----EN 349
            IEIPNIGDGSLKASLLI GS++Q SSQVRTYGDSAVVG+H+S+LND+KSSVSSH    EN
Sbjct: 481  IEIPNIGDGSLKASLLIHGSNVQVSSQVRTYGDSAVVGEHMSNLNDDKSSVSSHNKFCEN 540

Query: 350  EPYKNSVLREKDCLATETETTSGTNYQNGKVGVGQHTFSVEDIMKREKKRTEHDARHHGE 529
            EP KN +  EKDCL  ETE TSGT YQ GK+G+GQHTF V D  K E+  TE DAR HGE
Sbjct: 541  EPNKNCLPHEKDCLPPETEITSGT-YQ-GKMGMGQHTFGVADSTKNERDVTECDARRHGE 598

Query: 530  GSRLKKKREGKDKNINEMEVDFQMDSSVNKETKVLRNFRAALVDLVKELLKPSWHEGRLS 709
            GS  KKKR  +DK  +EM+VDFQ+D S+ KE+K L+ FRAALVD VKELLKP+WHEG LS
Sbjct: 599  GSGHKKKRVDRDKKNHEMDVDFQIDGSIQKESKALKFFRAALVDHVKELLKPAWHEGHLS 658

Query: 710  KDAHIMIVKKSVDKVVSTLEPHQIPTTEDSAQQYVSSCRMKIAKLVNGYVNKYGK 874
            KDAHIMIVKKSVDKVVSTLEPHQIP   D+A+QYVSS ++KIAKLVNGYVNKYGK
Sbjct: 659  KDAHIMIVKKSVDKVVSTLEPHQIPIM-DTAKQYVSSSQVKIAKLVNGYVNKYGK 712


>ref|XP_002329830.1| predicted protein [Populus trichocarpa] gi|222870892|gb|EEF08023.1|
            predicted protein [Populus trichocarpa]
          Length = 669

 Score =  240 bits (612), Expect = 6e-61
 Identities = 140/302 (46%), Positives = 185/302 (61%), Gaps = 10/302 (3%)
 Frame = +2

Query: 2    SERDDLPLVGTSRVPPHSTGYISKIRSYDWEPSVPFRPSFFITSMNVSSPGNLYDPLRDS 181
            SE + L L            + +KI S DWEPSVPFRPSFFIT   +SS G+ YDPLRDS
Sbjct: 370  SEPESLSLASVPGDQLRHAEHKTKISSNDWEPSVPFRPSFFITPEMISSAGSKYDPLRDS 429

Query: 182  IEIPNIGDGSLKASLLIQGSSIQASSQVRTYGDSAVVGKHISDLNDEKSSVSSHENEPY- 358
              +PN+GD S K S    G+SI  +SQ   YGDS       ++ N +KS++SSH+ +P+ 
Sbjct: 430  FVLPNVGDKSFKFSFFSLGASISNTSQQPIYGDSLSNRNFGTEFNGDKSTISSHD-KPHG 488

Query: 359  ----KNSVLREKDCLATETETTSGTNYQNGKVGVGQHTFSVEDI----MKREKKRTEHDA 514
                KN     KD   T T  T G    +G+ G      S   I    + R   + + DA
Sbjct: 489  SLSDKNCSTPGKDSFTTAT-VTGGAGTADGENGSALKEESASGIGYDKVNRVTNKIDRDA 547

Query: 515  RHHGEGSRLKKKREGKD-KNINEMEVDFQMDSSVNKETKVLRNFRAALVDLVKELLKPSW 691
            R   +GSR KK  +    +  N+MEVD ++     KE+KVLR+FR+AL+D VK+LLKP+W
Sbjct: 548  RPQTDGSRHKKDLKADSVRQNNDMEVDQKIGGDTQKESKVLRHFRSALIDFVKDLLKPTW 607

Query: 692  HEGRLSKDAHIMIVKKSVDKVVSTLEPHQIPTTEDSAQQYVSSCRMKIAKLVNGYVNKYG 871
             EG LSKDAH  IVKK+V+KV+STL+PHQIP T +S +QY+SS + K+AKLV GY++KYG
Sbjct: 608  REGHLSKDAHNTIVKKTVEKVLSTLQPHQIPATVESIKQYLSSSQPKMAKLVEGYISKYG 667

Query: 872  KS 877
            KS
Sbjct: 668  KS 669


>ref|XP_004155642.1| PREDICTED: uncharacterized protein LOC101231580 [Cucumis sativus]
          Length = 738

 Score =  185 bits (470), Expect = 2e-44
 Identities = 114/290 (39%), Positives = 159/290 (54%), Gaps = 9/290 (3%)
 Frame = +2

Query: 35   SRVPPHSTGYISKIRSYDWEPSVPFRPSFFITSMNVSSPGNLYDPLRDSIEIPNIGDGSL 214
            + V  + + Y  K  S DWEPSVPFRPSFFI S+  +S    YDP  DS+E+P I   S 
Sbjct: 452  THVSKNPSEYKMKCSSDDWEPSVPFRPSFFIPSITTASQ---YDPFLDSMEVPRIVGCSY 508

Query: 215  KASLLIQG--SSIQASSQVRTYGDSAVVGKHISDLNDEKSSVSSHENEPYKNSV---LRE 379
              +L  QG   +   S+  R  G+  V G    + ND+ SS+SSH     KN     L+ 
Sbjct: 509  NVTLDRQGHEEASPLSTLQRASGNFVVPGSSKPEFNDDTSSLSSHNKAADKNGKVGHLQG 568

Query: 380  KDCLATETETTS--GTNYQNGKVGVGQHTFSV--EDIMKREKKRTEHDARHHGEGSRLKK 547
            KD L  E E     G + +  +     H      +D+ K++K     + +        K 
Sbjct: 569  KDPLLLEPEIRGSFGLDGRFSRTREDDHKGLTCEKDVTKKKKMGIGGELKLPNISLHEKD 628

Query: 548  KREGKDKNINEMEVDFQMDSSVNKETKVLRNFRAALVDLVKELLKPSWHEGRLSKDAHIM 727
                 D+ + +M+    M+ +  KE+K  R+FR+AL++LVKE+LKP W EG L KD H  
Sbjct: 629  SEADSDRQLGDMDGKHLMEGNAPKESKATRHFRSALIELVKEILKPKWREGHLKKDVHNT 688

Query: 728  IVKKSVDKVVSTLEPHQIPTTEDSAQQYVSSCRMKIAKLVNGYVNKYGKS 877
            +VKK+ DKV+  L+ HQ+PTT +S +QY+SS R KI KLV GYV+KYGKS
Sbjct: 689  VVKKTFDKVLGALQSHQVPTTVESVKQYLSSSRPKIEKLVEGYVSKYGKS 738


>ref|XP_004134949.1| PREDICTED: zinc finger CCCH domain-containing protein 27-like
            [Cucumis sativus]
          Length = 458

 Score =  185 bits (470), Expect = 2e-44
 Identities = 114/290 (39%), Positives = 159/290 (54%), Gaps = 9/290 (3%)
 Frame = +2

Query: 35   SRVPPHSTGYISKIRSYDWEPSVPFRPSFFITSMNVSSPGNLYDPLRDSIEIPNIGDGSL 214
            + V  + + Y  K  S DWEPSVPFRPSFFI S+  +S    YDP  DS+E+P I   S 
Sbjct: 172  THVSKNPSEYKMKCSSDDWEPSVPFRPSFFIPSITTASQ---YDPFLDSMEVPRIVGCSY 228

Query: 215  KASLLIQG--SSIQASSQVRTYGDSAVVGKHISDLNDEKSSVSSHENEPYKNSV---LRE 379
              +L  QG   +   S+  R  G+  V G    + ND+ SS+SSH     KN     L+ 
Sbjct: 229  NVTLDRQGHEEASPLSTLQRASGNFVVPGSSKPEFNDDTSSLSSHNKAADKNGKVGHLQG 288

Query: 380  KDCLATETETTS--GTNYQNGKVGVGQHTFSV--EDIMKREKKRTEHDARHHGEGSRLKK 547
            KD L  E E     G + +  +     H      +D+ K++K     + +        K 
Sbjct: 289  KDPLLLEPEIRGSFGLDGRFSRTREDDHKGLTCEKDVTKKKKMGIGGELKLPNISLHEKD 348

Query: 548  KREGKDKNINEMEVDFQMDSSVNKETKVLRNFRAALVDLVKELLKPSWHEGRLSKDAHIM 727
                 D+ + +M+    M+ +  KE+K  R+FR+AL++LVKE+LKP W EG L KD H  
Sbjct: 349  SEADSDRQLGDMDGKHLMEGNAPKESKATRHFRSALIELVKEILKPKWREGHLKKDVHNT 408

Query: 728  IVKKSVDKVVSTLEPHQIPTTEDSAQQYVSSCRMKIAKLVNGYVNKYGKS 877
            +VKK+ DKV+  L+ HQ+PTT +S +QY+SS R KI KLV GYV+KYGKS
Sbjct: 409  VVKKTFDKVLGALQSHQVPTTVESVKQYLSSSRPKIEKLVEGYVSKYGKS 458


Top