BLASTX nr result

ID: Glycyrrhiza23_contig00017271 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00017271
         (656 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003546855.1| PREDICTED: E3 ubiquitin-protein ligase RNF18...   144   1e-32
ref|XP_003532889.1| PREDICTED: E3 ubiquitin-protein ligase RNF18...   142   7e-32
ref|XP_002271062.1| PREDICTED: E3 ubiquitin-protein ligase RING1...    97   2e-18
ref|XP_003591901.1| E3 ubiquitin-protein ligase [Medicago trunca...    95   1e-17
ref|XP_004158213.1| PREDICTED: uncharacterized LOC101219937 [Cuc...    89   6e-16

>ref|XP_003546855.1| PREDICTED: E3 ubiquitin-protein ligase RNF181-like [Glycine max]
          Length = 233

 Score =  144 bits (364), Expect = 1e-32
 Identities = 70/116 (60%), Positives = 86/116 (74%)
 Frame = -3

Query: 651 VTHALLSRLDPNGVVFCAVCKDPIAVDAEAKLLPCDHLYHSDCITPWLLLRNSCPLCRFR 472
           VT +LLS LDPNGVV CAVCKD I ++A+AK LPC HLYHSDCITPW+ L +SCPLCRFR
Sbjct: 93  VTPSLLSSLDPNGVVLCAVCKDQITLNAQAKQLPCQHLYHSDCITPWIELNSSCPLCRFR 152

Query: 471 ISXXXXXXXXXXXXXXERNASAIRRQLMVRLSELTEDDFYGLRITLNHIASRHALL 304
           +               +   + IRR+++ RL+ELTE+DFYGLR TL+HIASRHAL+
Sbjct: 153 LE-EEEEEGGDADADADAVMTEIRREIIARLTELTEEDFYGLRTTLSHIASRHALI 207


>ref|XP_003532889.1| PREDICTED: E3 ubiquitin-protein ligase RNF181-like [Glycine max]
          Length = 207

 Score =  142 bits (357), Expect = 7e-32
 Identities = 72/116 (62%), Positives = 81/116 (69%)
 Frame = -3

Query: 651 VTHALLSRLDPNGVVFCAVCKDPIAVDAEAKLLPCDHLYHSDCITPWLLLRNSCPLCRFR 472
           VT +LLS LDPNGVV CAVCKD I   AEAK LPC HLYHSDCITPWL L  SCPLCRFR
Sbjct: 79  VTPSLLSSLDPNGVVRCAVCKDQITPHAEAKQLPCKHLYHSDCITPWLELHASCPLCRFR 138

Query: 471 ISXXXXXXXXXXXXXXERNASAIRRQLMVRLSELTEDDFYGLRITLNHIASRHALL 304
           +                   + IRR+++ RL+ LTE+DFYGLR TLNHIASRHAL+
Sbjct: 139 LEEEEEEGGDGV-------MTKIRREIIARLTVLTEEDFYGLRTTLNHIASRHALI 187


>ref|XP_002271062.1| PREDICTED: E3 ubiquitin-protein ligase RING1-like [Vitis vinifera]
          Length = 312

 Score = 97.4 bits (241), Expect = 2e-18
 Identities = 54/120 (45%), Positives = 70/120 (58%), Gaps = 1/120 (0%)
 Frame = -3

Query: 630 RLDPNGVVFCAVCKDPIAVDAEAKLLPCDHLYHSDCITPWLLLRNSCPLCRFRISXXXXX 451
           +LDP  ++FCAVCKD   VD EAK LPC+H+YHSDCI PWL  +NSCPLCRFR+      
Sbjct: 142 QLDP--ILFCAVCKDQFVVDVEAKRLPCNHIYHSDCILPWLSQQNSCPLCRFRL------ 193

Query: 450 XXXXXXXXXERNASAIRRQLMVRLSELTED-DFYGLRITLNHIASRHALLHSGAASAPGQ 274
                      ++      + +   +L ED + +GL  TL HIA R+ L+   A SA GQ
Sbjct: 194 -----PTDEGEDSGDAGATVTMTFGDLMEDHELFGLGSTLRHIARRNRLVFP-ALSAEGQ 247


>ref|XP_003591901.1| E3 ubiquitin-protein ligase [Medicago truncatula]
           gi|355480949|gb|AES62152.1| E3 ubiquitin-protein ligase
           [Medicago truncatula]
          Length = 123

 Score = 94.7 bits (234), Expect = 1e-17
 Identities = 51/107 (47%), Positives = 67/107 (62%), Gaps = 1/107 (0%)
 Frame = -3

Query: 582 IAVDAEAKLLPCDHLYHSDCITPWLLLRNSCPLCRFRISXXXXXXXXXXXXXXERNASAI 403
           I+V+ EAK LPC+HLYHS CITPW+  R+SCP+CRF ++                +A  +
Sbjct: 19  ISVNEEAKQLPCNHLYHSGCITPWIHRRSSCPICRFHVNDNDVDDEEDEDV----DAVTV 74

Query: 402 RRQLMVRLSELTE-DDFYGLRITLNHIASRHALLHSGAASAPGQDNG 265
             +++ RL EL+E DDFYGLRIT+N+IAS    LH   AS  G D G
Sbjct: 75  MSRMVPRLLELSEDDDFYGLRITINNIASGRHALH---ASVAGDDGG 118


>ref|XP_004158213.1| PREDICTED: uncharacterized LOC101219937 [Cucumis sativus]
          Length = 333

 Score = 89.4 bits (220), Expect = 6e-16
 Identities = 49/119 (41%), Positives = 66/119 (55%), Gaps = 1/119 (0%)
 Frame = -3

Query: 651 VTHALLSRLDPNGVVFCAVCKDPIAVDAEAKLLPCDHLYHSDCITPWLLLRNSCPLCRFR 472
           VT ALL   D + V+ CA+CKD   ++ EAK LPC HLYH DCI PWL   +SCPLCRF+
Sbjct: 149 VTSALL---DEDPVLICAICKDQFLLEVEAKQLPCSHLYHPDCILPWLSNHDSCPLCRFK 205

Query: 471 ISXXXXXXXXXXXXXXERNASAIRRQLMVRLSELT-EDDFYGLRITLNHIASRHALLHS 298
           +                 +    R   ++R  +L  ++D YGLR TL  +A RH+ + S
Sbjct: 206 L-----------PSDDPSDRVRCRTSALLRARDLMHQEDSYGLRTTLELMARRHSSISS 253


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