BLASTX nr result

ID: Glycyrrhiza23_contig00017253 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00017253
         (456 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI32689.3| unnamed protein product [Vitis vinifera]              218   3e-55
ref|XP_002279025.1| PREDICTED: 40S ribosomal protein S23-like [V...   218   3e-55
gb|ADJ67168.1| ribosomal protein S23 [Jatropha curcas]                218   4e-55
ref|XP_002523902.1| 40S ribosomal protein S23, putative [Ricinus...   218   4e-55
ref|XP_002326333.1| predicted protein [Populus trichocarpa] gi|2...   217   7e-55

>emb|CBI32689.3| unnamed protein product [Vitis vinifera]
          Length = 189

 Score =  218 bits (556), Expect = 3e-55
 Identities = 106/107 (99%), Positives = 106/107 (99%)
 Frame = +2

Query: 134 MGKTRGMGAARKLKSHRRRQRWADKAYKKSNLGNEWKKPFAGSSHAKGIVLEKIGIEAKQ 313
           MGKTRGMGA RKLKSHRRRQRWADKAYKKSNLGNEWKKPFAGSSHAKGIVLEKIGIEAKQ
Sbjct: 48  MGKTRGMGAGRKLKSHRRRQRWADKAYKKSNLGNEWKKPFAGSSHAKGIVLEKIGIEAKQ 107

Query: 314 PNSAIRKCARVQLIKNGKKIAAFVPNDGCLNYIEENDEVLIAGFGRK 454
           PNSAIRKCARVQLIKNGKKIAAFVPNDGCLNYIEENDEVLIAGFGRK
Sbjct: 108 PNSAIRKCARVQLIKNGKKIAAFVPNDGCLNYIEENDEVLIAGFGRK 154


>ref|XP_002279025.1| PREDICTED: 40S ribosomal protein S23-like [Vitis vinifera]
          Length = 142

 Score =  218 bits (556), Expect = 3e-55
 Identities = 106/107 (99%), Positives = 106/107 (99%)
 Frame = +2

Query: 134 MGKTRGMGAARKLKSHRRRQRWADKAYKKSNLGNEWKKPFAGSSHAKGIVLEKIGIEAKQ 313
           MGKTRGMGA RKLKSHRRRQRWADKAYKKSNLGNEWKKPFAGSSHAKGIVLEKIGIEAKQ
Sbjct: 1   MGKTRGMGAGRKLKSHRRRQRWADKAYKKSNLGNEWKKPFAGSSHAKGIVLEKIGIEAKQ 60

Query: 314 PNSAIRKCARVQLIKNGKKIAAFVPNDGCLNYIEENDEVLIAGFGRK 454
           PNSAIRKCARVQLIKNGKKIAAFVPNDGCLNYIEENDEVLIAGFGRK
Sbjct: 61  PNSAIRKCARVQLIKNGKKIAAFVPNDGCLNYIEENDEVLIAGFGRK 107


>gb|ADJ67168.1| ribosomal protein S23 [Jatropha curcas]
          Length = 156

 Score =  218 bits (555), Expect = 4e-55
 Identities = 106/107 (99%), Positives = 107/107 (100%)
 Frame = +2

Query: 134 MGKTRGMGAARKLKSHRRRQRWADKAYKKSNLGNEWKKPFAGSSHAKGIVLEKIGIEAKQ 313
           MGKTRGMGAARKLKSHRRRQRWADKAYKKS+LGNEWKKPFAGSSHAKGIVLEKIGIEAKQ
Sbjct: 1   MGKTRGMGAARKLKSHRRRQRWADKAYKKSHLGNEWKKPFAGSSHAKGIVLEKIGIEAKQ 60

Query: 314 PNSAIRKCARVQLIKNGKKIAAFVPNDGCLNYIEENDEVLIAGFGRK 454
           PNSAIRKCARVQLIKNGKKIAAFVPNDGCLNYIEENDEVLIAGFGRK
Sbjct: 61  PNSAIRKCARVQLIKNGKKIAAFVPNDGCLNYIEENDEVLIAGFGRK 107


>ref|XP_002523902.1| 40S ribosomal protein S23, putative [Ricinus communis]
           gi|255568414|ref|XP_002525181.1| 40S ribosomal protein
           S23, putative [Ricinus communis]
           gi|223535478|gb|EEF37147.1| 40S ribosomal protein S23,
           putative [Ricinus communis] gi|223536832|gb|EEF38471.1|
           40S ribosomal protein S23, putative [Ricinus communis]
          Length = 142

 Score =  218 bits (555), Expect = 4e-55
 Identities = 106/107 (99%), Positives = 107/107 (100%)
 Frame = +2

Query: 134 MGKTRGMGAARKLKSHRRRQRWADKAYKKSNLGNEWKKPFAGSSHAKGIVLEKIGIEAKQ 313
           MGKTRGMGAARKLKSHRRRQRWADKAYKKS+LGNEWKKPFAGSSHAKGIVLEKIGIEAKQ
Sbjct: 1   MGKTRGMGAARKLKSHRRRQRWADKAYKKSHLGNEWKKPFAGSSHAKGIVLEKIGIEAKQ 60

Query: 314 PNSAIRKCARVQLIKNGKKIAAFVPNDGCLNYIEENDEVLIAGFGRK 454
           PNSAIRKCARVQLIKNGKKIAAFVPNDGCLNYIEENDEVLIAGFGRK
Sbjct: 61  PNSAIRKCARVQLIKNGKKIAAFVPNDGCLNYIEENDEVLIAGFGRK 107


>ref|XP_002326333.1| predicted protein [Populus trichocarpa]
           gi|224098071|ref|XP_002311115.1| predicted protein
           [Populus trichocarpa] gi|224112945|ref|XP_002316341.1|
           predicted protein [Populus trichocarpa]
           gi|224140159|ref|XP_002323452.1| predicted protein
           [Populus trichocarpa] gi|118483731|gb|ABK93759.1|
           unknown [Populus trichocarpa]
           gi|118484067|gb|ABK93919.1| unknown [Populus
           trichocarpa] gi|118487579|gb|ABK95615.1| unknown
           [Populus trichocarpa] gi|222833526|gb|EEE72003.1|
           predicted protein [Populus trichocarpa]
           gi|222850935|gb|EEE88482.1| predicted protein [Populus
           trichocarpa] gi|222865381|gb|EEF02512.1| predicted
           protein [Populus trichocarpa]
           gi|222868082|gb|EEF05213.1| predicted protein [Populus
           trichocarpa]
          Length = 142

 Score =  217 bits (553), Expect = 7e-55
 Identities = 105/107 (98%), Positives = 106/107 (99%)
 Frame = +2

Query: 134 MGKTRGMGAARKLKSHRRRQRWADKAYKKSNLGNEWKKPFAGSSHAKGIVLEKIGIEAKQ 313
           MGKTRGMGA RKLKSHRRRQRWADK+YKKSNLGNEWKKPFAGSSHAKGIVLEKIGIEAKQ
Sbjct: 1   MGKTRGMGAGRKLKSHRRRQRWADKSYKKSNLGNEWKKPFAGSSHAKGIVLEKIGIEAKQ 60

Query: 314 PNSAIRKCARVQLIKNGKKIAAFVPNDGCLNYIEENDEVLIAGFGRK 454
           PNSAIRKCARVQLIKNGKKIAAFVPNDGCLNYIEENDEVLIAGFGRK
Sbjct: 61  PNSAIRKCARVQLIKNGKKIAAFVPNDGCLNYIEENDEVLIAGFGRK 107


Top