BLASTX nr result

ID: Glycyrrhiza23_contig00017248 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00017248
         (692 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFK40203.1| unknown [Lotus japonicus]                              175   9e-42
ref|NP_001241012.1| uncharacterized protein LOC100820368 [Glycin...   171   1e-40
ref|NP_001238257.1| uncharacterized protein LOC100499936 [Glycin...   170   2e-40
ref|XP_004146395.1| PREDICTED: RNA polymerase II transcriptional...   149   5e-34
ref|XP_002275126.1| PREDICTED: RNA polymerase II transcriptional...   145   1e-32

>gb|AFK40203.1| unknown [Lotus japonicus]
          Length = 106

 Score =  175 bits (443), Expect = 9e-42
 Identities = 86/105 (81%), Positives = 98/105 (93%)
 Frame = +1

Query: 187 MSGKGKAKRDEQDRASDGGDSEGHAPPKKSLKKNTDEDSDSIVVCEISKNRRVAVRNWQG 366
           MSGKGK KRD+ DRASD  DS+ HAPPKKSLKK++DED DSIVVCEISKNRRV+VRNWQG
Sbjct: 1   MSGKGK-KRDDLDRASDA-DSDSHAPPKKSLKKDSDEDPDSIVVCEISKNRRVSVRNWQG 58

Query: 367 KIMVDIREFFLKDGKQLPGKKGITLTMDQWNVLRNHIEEIDKAVS 501
           +I+VDI EF++KDGKQ+PGKKGI+LTMDQWNVLRNHIEEIDKAV+
Sbjct: 59  RIVVDILEFYVKDGKQMPGKKGISLTMDQWNVLRNHIEEIDKAVN 103


>ref|NP_001241012.1| uncharacterized protein LOC100820368 [Glycine max]
           gi|255637253|gb|ACU18957.1| unknown [Glycine max]
          Length = 105

 Score =  171 bits (434), Expect = 1e-40
 Identities = 81/104 (77%), Positives = 94/104 (90%)
 Frame = +1

Query: 199 GKAKRDEQDRASDGGDSEGHAPPKKSLKKNTDEDSDSIVVCEISKNRRVAVRNWQGKIMV 378
           GKAKR + D ASD  DSEGHAPP KSLKK++D+D DS+ +CEISKNRRVAVRNW+G IMV
Sbjct: 3   GKAKRRDDDDASDA-DSEGHAPPMKSLKKDSDDDPDSVTICEISKNRRVAVRNWKGSIMV 61

Query: 379 DIREFFLKDGKQLPGKKGITLTMDQWNVLRNHIEEIDKAVSGNS 510
           DIREF++KDGKQLPG+KGI+LTMDQWNVLRNH+EEIDKAV+ NS
Sbjct: 62  DIREFYVKDGKQLPGRKGISLTMDQWNVLRNHVEEIDKAVNENS 105


>ref|NP_001238257.1| uncharacterized protein LOC100499936 [Glycine max]
           gi|255627821|gb|ACU14255.1| unknown [Glycine max]
          Length = 105

 Score =  170 bits (431), Expect = 2e-40
 Identities = 81/104 (77%), Positives = 94/104 (90%)
 Frame = +1

Query: 199 GKAKRDEQDRASDGGDSEGHAPPKKSLKKNTDEDSDSIVVCEISKNRRVAVRNWQGKIMV 378
           GKAKR + D ASD  DSEGHAPPKKSLKK++D+D DSI VCEI KNRRVAVRNW+G IMV
Sbjct: 3   GKAKRRDDDGASDA-DSEGHAPPKKSLKKDSDDDPDSITVCEILKNRRVAVRNWKGSIMV 61

Query: 379 DIREFFLKDGKQLPGKKGITLTMDQWNVLRNHIEEIDKAVSGNS 510
           DIREF+++DGKQLPG+KGI+LTMDQWNVLRNH+EEIDKA++ NS
Sbjct: 62  DIREFYVEDGKQLPGRKGISLTMDQWNVLRNHVEEIDKAINENS 105


>ref|XP_004146395.1| PREDICTED: RNA polymerase II transcriptional coactivator KIWI-like
           [Cucumis sativus] gi|449527765|ref|XP_004170880.1|
           PREDICTED: RNA polymerase II transcriptional coactivator
           KIWI-like [Cucumis sativus]
          Length = 104

 Score =  149 bits (376), Expect = 5e-34
 Identities = 74/108 (68%), Positives = 88/108 (81%)
 Frame = +1

Query: 187 MSGKGKAKRDEQDRASDGGDSEGHAPPKKSLKKNTDEDSDSIVVCEISKNRRVAVRNWQG 366
           MS  GK K DE D       SEG APP K+ KK++D D+D IVVCE+SKNRRV VRNWQG
Sbjct: 1   MSASGKRKGDEDDV------SEGDAPPSKTFKKDSD-DTDEIVVCELSKNRRVMVRNWQG 53

Query: 367 KIMVDIREFFLKDGKQLPGKKGITLTMDQWNVLRNHIEEIDKAVSGNS 510
           KI+VDIREF++KDGKQ+PGKKGI+L++DQWNVL NH+EEIDKAV+ NS
Sbjct: 54  KIVVDIREFYVKDGKQMPGKKGISLSLDQWNVLLNHVEEIDKAVNENS 101


>ref|XP_002275126.1| PREDICTED: RNA polymerase II transcriptional coactivator KIWI
           [Vitis vinifera] gi|147846591|emb|CAN79502.1|
           hypothetical protein VITISV_022689 [Vitis vinifera]
           gi|296082597|emb|CBI21602.3| unnamed protein product
           [Vitis vinifera]
          Length = 103

 Score =  145 bits (365), Expect = 1e-32
 Identities = 73/108 (67%), Positives = 90/108 (83%)
 Frame = +1

Query: 187 MSGKGKAKRDEQDRASDGGDSEGHAPPKKSLKKNTDEDSDSIVVCEISKNRRVAVRNWQG 366
           MS  GK K   Q  ASDG DS+ HAP KKS  K++D D D+I+VCEIS+NRRV+VRNWQG
Sbjct: 1   MSKWGKRK---QSYASDG-DSDDHAPSKKSSMKDSD-DPDNIIVCEISRNRRVSVRNWQG 55

Query: 367 KIMVDIREFFLKDGKQLPGKKGITLTMDQWNVLRNHIEEIDKAVSGNS 510
           K+ VDIREF++KDGKQ+PGKKGI+LTMDQWNVLR+H+ EID+AV+ N+
Sbjct: 56  KVQVDIREFYVKDGKQMPGKKGISLTMDQWNVLRDHVNEIDEAVADNA 103


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