BLASTX nr result

ID: Glycyrrhiza23_contig00017238 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00017238
         (371 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003596687.1| Disease-resistance protein [Medicago truncat...   170   1e-40
ref|XP_003623322.1| TIR-NBS-LRR type disease resistance protein ...   167   8e-40
ref|XP_003610657.1| TIR-NBS-LRR type disease resistance protein ...   154   6e-36
ref|XP_003596679.1| TIR-NBS-LRR type disease resistance protein ...   149   2e-34
ref|XP_003620652.1| Elongation factor Ts [Medicago truncatula] g...   103   1e-20

>ref|XP_003596687.1| Disease-resistance protein [Medicago truncatula]
            gi|355485735|gb|AES66938.1| Disease-resistance protein
            [Medicago truncatula]
          Length = 1288

 Score =  170 bits (430), Expect = 1e-40
 Identities = 84/128 (65%), Positives = 100/128 (78%), Gaps = 5/128 (3%)
 Frame = +2

Query: 2    LEYLDMDRCTRLSMIHESIGVLAKLRFISLRDCTSLVRIPDNFNDMTSLITLDLRGCFRF 181
            LEYLDMD CT LS +HESIG +AKLRF+SLRDC  L  IP++ N +TSL+TLDLRGC + 
Sbjct: 817  LEYLDMDGCTSLSTVHESIGAIAKLRFLSLRDCIILAGIPNSINTITSLVTLDLRGCLKL 876

Query: 182  TDLPV-----HSPMESLIFLDLSFCNISEVPNAIGELRCLERLNLQGNNFSMLPSTIIKL 346
            T LP+      S MESLIFLD+SFCN+++VP+AIGEL CLERLNLQGNNF  LP T + L
Sbjct: 877  TTLPLGQNLSSSHMESLIFLDVSFCNLNKVPDAIGELHCLERLNLQGNNFDALPYTFLNL 936

Query: 347  SSLAYLNL 370
              L+YLNL
Sbjct: 937  GRLSYLNL 944



 Score = 63.9 bits (154), Expect = 1e-08
 Identities = 44/126 (34%), Positives = 72/126 (57%), Gaps = 3/126 (2%)
 Frame = +2

Query: 2    LEYLDMDRCTRLSMIHESIGVLAKLRFISLRDCTSLVRIPDNF-NDMTSLITLDLRGCFR 178
            LE LD   CT L  +H SIG L +L F+SL++C+SLV +     +++ SL  L L GC +
Sbjct: 745  LERLDFTGCTNLIQVHPSIGHLTELVFLSLQNCSSLVNLDFGIVSNLYSLRVLRLSGCTK 804

Query: 179  FTDLPVHSPMESLIFLDLSFC-NISEVPNAIGELRCLERLNLQG-NNFSMLPSTIIKLSS 352
                P  +   +L +LD+  C ++S V  +IG +  L  L+L+     + +P++I  ++S
Sbjct: 805  LEKTPDFTGASNLEYLDMDGCTSLSTVHESIGAIAKLRFLSLRDCIILAGIPNSINTITS 864

Query: 353  LAYLNL 370
            L  L+L
Sbjct: 865  LVTLDL 870


>ref|XP_003623322.1| TIR-NBS-LRR type disease resistance protein [Medicago truncatula]
            gi|355498337|gb|AES79540.1| TIR-NBS-LRR type disease
            resistance protein [Medicago truncatula]
          Length = 1204

 Score =  167 bits (423), Expect = 8e-40
 Identities = 90/128 (70%), Positives = 104/128 (81%), Gaps = 5/128 (3%)
 Frame = +2

Query: 2    LEYLDMDRCTRLSMIHESIGVLAKLRFISLRDCTSLVRIPDNFNDMTSLITLDLRGCFRF 181
            LEYLDMD+CT L  I +SIG L KLRF+SLR CT+LV IPD+FN+MT+L+TLDL GC RF
Sbjct: 697  LEYLDMDQCTSLYKIDKSIGDLTKLRFLSLRGCTNLVIIPDSFNNMTNLMTLDLCGCSRF 756

Query: 182  TDLPVHS-----PMESLIFLDLSFCNISEVPNAIGELRCLERLNLQGNNFSMLPSTIIKL 346
            T+LP+ S       +SLI LDLSFCNIS VP+AIGELR LERLNLQGNNF+ LP TI +L
Sbjct: 757  TNLPLGSVSSFHTQQSLISLDLSFCNISIVPDAIGELRGLERLNLQGNNFTELPCTIQRL 816

Query: 347  SSLAYLNL 370
            SSLAYLNL
Sbjct: 817  SSLAYLNL 824


>ref|XP_003610657.1| TIR-NBS-LRR type disease resistance protein [Medicago truncatula]
            gi|355511992|gb|AES93615.1| TIR-NBS-LRR type disease
            resistance protein [Medicago truncatula]
          Length = 1128

 Score =  154 bits (390), Expect = 6e-36
 Identities = 81/129 (62%), Positives = 100/129 (77%), Gaps = 6/129 (4%)
 Frame = +2

Query: 2    LEYLDMDRCTRLSMIHESIGVLAKLRFISLRDCTSLVRIPDNFNDMTSLITLDLRGCFRF 181
            LEYLDM+RC  LS I +SIG L KLRF+SLR CT L  I + F++MTSL TLDL  C+ F
Sbjct: 706  LEYLDMERCINLSKIDKSIGTLTKLRFLSLRHCTKLFPISNIFDNMTSLTTLDLCECWNF 765

Query: 182  TDLPVH------SPMESLIFLDLSFCNISEVPNAIGELRCLERLNLQGNNFSMLPSTIIK 343
            T LP+       SP+ESLIFLDLSFCNIS +P++IG+L+ LERLNLQGN+F+ LPST  +
Sbjct: 766  TTLPLPTTVNSPSPLESLIFLDLSFCNISVLPDSIGKLKSLERLNLQGNHFTTLPSTFKR 825

Query: 344  LSSLAYLNL 370
            L++LAYLNL
Sbjct: 826  LANLAYLNL 834



 Score = 58.9 bits (141), Expect = 4e-07
 Identities = 35/103 (33%), Positives = 59/103 (57%), Gaps = 2/103 (1%)
 Frame = +2

Query: 2   LEYLDMDRCTRLSMIHESIGVLAKLRFISLRDCTSLVRIP-DNFNDMTSLITLDLRGCFR 178
           LE +D   C  L  +H S+G+L +L F+SL++CT+L  +   + + + SL  L L GC  
Sbjct: 634 LERIDFTGCINLLQVHPSVGLLTELVFLSLQNCTNLTCLDFGSVSRVWSLRVLRLSGCIG 693

Query: 179 FTDLPVHSPMESLIFLDLSFC-NISEVPNAIGELRCLERLNLQ 304
             + P  +   +L +LD+  C N+S++  +IG L  L  L+L+
Sbjct: 694 LRNTPDFTVAANLEYLDMERCINLSKIDKSIGTLTKLRFLSLR 736


>ref|XP_003596679.1| TIR-NBS-LRR type disease resistance protein [Medicago truncatula]
            gi|355485727|gb|AES66930.1| TIR-NBS-LRR type disease
            resistance protein [Medicago truncatula]
          Length = 1406

 Score =  149 bits (376), Expect = 2e-34
 Identities = 81/143 (56%), Positives = 97/143 (67%), Gaps = 20/143 (13%)
 Frame = +2

Query: 2    LEYLDMDRCTRLSMIHESIGVLAKLRFISLRDCTSLVRIPDNFNDMTSLITLDLRGCFRF 181
            LEYLD+D+C  LS I++SIG L +L+F+S R+CTSL  IP++ N MTSL TLDL GCF+ 
Sbjct: 974  LEYLDIDQCVSLSTINQSIGDLTQLKFLSFRECTSLASIPESINSMTSLETLDLCGCFKL 1033

Query: 182  TDLPVHSP--------------------MESLIFLDLSFCNISEVPNAIGELRCLERLNL 301
              LP+                       M SLIFLDLSFCN+S VPNAIGELR LERLNL
Sbjct: 1034 ESLPLLGNTSVSEINVDLSNDELISSYYMNSLIFLDLSFCNLSRVPNAIGELRHLERLNL 1093

Query: 302  QGNNFSMLPSTIIKLSSLAYLNL 370
            +GNN   LPS++  LSSLAYLNL
Sbjct: 1094 EGNNLISLPSSVGGLSSLAYLNL 1116



 Score = 59.7 bits (143), Expect = 2e-07
 Identities = 40/128 (31%), Positives = 71/128 (55%), Gaps = 5/128 (3%)
 Frame = +2

Query: 2    LEYLDMDRCTRLSMIHESIGVLAKLRFISLRDCTSLVRI---PDNFNDMTSLITLDLRGC 172
            +E LD   C  LS +H SIG+L +L F+SL  C +LV +       +++ SL  L L GC
Sbjct: 900  IERLDFTGCINLSYVHPSIGLLKELAFLSLEGCRNLVSLVLDGHPASNLYSLKVLHLSGC 959

Query: 173  FRFTDLPVHSPMESLIFLDLSFC-NISEVPNAIGELRCLERLNL-QGNNFSMLPSTIIKL 346
             +   +     + +L +LD+  C ++S +  +IG+L  L+ L+  +  + + +P +I  +
Sbjct: 960  SKLEIVSDFRGVSNLEYLDIDQCVSLSTINQSIGDLTQLKFLSFRECTSLASIPESINSM 1019

Query: 347  SSLAYLNL 370
            +SL  L+L
Sbjct: 1020 TSLETLDL 1027


>ref|XP_003620652.1| Elongation factor Ts [Medicago truncatula]
            gi|355495667|gb|AES76870.1| Elongation factor Ts
            [Medicago truncatula]
          Length = 2436

 Score =  103 bits (258), Expect = 1e-20
 Identities = 59/135 (43%), Positives = 87/135 (64%), Gaps = 12/135 (8%)
 Frame = +2

Query: 2    LEYLDMDRCTRLSMIHESIGVLAKLRFISLRDCTSLVRIPDNFNDMTSLITLDLRGCFRF 181
            L YL++  C +L  +  SIG+L KL  ++++DC +LV IP+N  D++SL  L++ GC + 
Sbjct: 674  LVYLNLGGCKKLVELDPSIGLLRKLVCLNVKDCENLVSIPNNIFDLSSLEYLNMNGCSKV 733

Query: 182  TDLPVHSP------------MESLIFLDLSFCNISEVPNAIGELRCLERLNLQGNNFSML 325
             +  + SP            ++ L  +D+SFCN+S+VP+AI +L  LERLNL+GNNF  L
Sbjct: 734  FNNSLPSPTRHTYLLPSLHSLDCLRGVDISFCNLSQVPDAIEDLHWLERLNLKGNNFVTL 793

Query: 326  PSTIIKLSSLAYLNL 370
            PS + KLS L YLNL
Sbjct: 794  PS-LRKLSELVYLNL 807



 Score = 92.8 bits (229), Expect = 3e-17
 Identities = 54/138 (39%), Positives = 85/138 (61%), Gaps = 15/138 (10%)
 Frame = +2

Query: 2    LEYLDMDRCTRLSMIHESIGVLAKLRFISLRDCTSLVRIPDNFNDMTSLITLDLRGC--- 172
            LE+L+++ C  L  +  SIG+L KL +++L  C +LV IP+N + ++SL  L++ GC   
Sbjct: 2015 LEWLNLELCANLVELDPSIGLLRKLVYLNLEGCVNLVSIPNNISGLSSLEDLNICGCSKA 2074

Query: 173  FRFTDLPVHSPMESLIFL------------DLSFCNISEVPNAIGELRCLERLNLQGNNF 316
            F  + + + +PM +   L            D+SFC++++VP++I  L  LE+LNL GN+F
Sbjct: 2075 FSSSSIMLPTPMRNTYLLPSVHSLNCLRKVDISFCHLNQVPDSIECLHSLEKLNLGGNDF 2134

Query: 317  SMLPSTIIKLSSLAYLNL 370
              LPS + KLS L YLNL
Sbjct: 2135 VTLPS-LRKLSKLVYLNL 2151


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