BLASTX nr result

ID: Glycyrrhiza23_contig00017221 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00017221
         (573 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003551813.1| PREDICTED: zinc finger CCCH domain-containin...   229   2e-58
ref|XP_003532145.1| PREDICTED: zinc finger CCCH domain-containin...   223   1e-56
ref|XP_002324344.1| predicted protein [Populus trichocarpa] gi|2...   180   2e-43
emb|CBI21169.3| unnamed protein product [Vitis vinifera]              174   1e-41
ref|XP_002285580.1| PREDICTED: zinc finger CCCH domain-containin...   174   1e-41

>ref|XP_003551813.1| PREDICTED: zinc finger CCCH domain-containing protein 18-like
           [Glycine max]
          Length = 492

 Score =  229 bits (585), Expect = 2e-58
 Identities = 113/125 (90%), Positives = 119/125 (95%)
 Frame = +1

Query: 199 RDSLSAIDQALLSDPSNHELLAVHEELVQVIKDAEEGLLHLKRARLLQEADSVLHTTNIF 378
           RDSLSAI QALLSDP+N ELLAVHEELVQ IKDAEEGLLHLKRARLLQEADSVLH TNIF
Sbjct: 21  RDSLSAIGQALLSDPTNPELLAVHEELVQAIKDAEEGLLHLKRARLLQEADSVLHNTNIF 80

Query: 379 TEEEKVEPLDPADVEPEPLEEKCYSVGSKCRFRYKDGRWYNGQVVQLDNSMAKISFLTPT 558
           TEEEKVEPLD  DVEPEPLE+KCYSVGSKCRFR+KDGRWYNGQVVQLDN++AK+SFLTPT
Sbjct: 81  TEEEKVEPLDSTDVEPEPLEDKCYSVGSKCRFRHKDGRWYNGQVVQLDNAVAKVSFLTPT 140

Query: 559 SENML 573
           SENML
Sbjct: 141 SENML 145


>ref|XP_003532145.1| PREDICTED: zinc finger CCCH domain-containing protein 18-like
           [Glycine max]
          Length = 495

 Score =  223 bits (569), Expect = 1e-56
 Identities = 112/125 (89%), Positives = 119/125 (95%)
 Frame = +1

Query: 199 RDSLSAIDQALLSDPSNHELLAVHEELVQVIKDAEEGLLHLKRARLLQEADSVLHTTNIF 378
           RDSLSAIDQALLSDP++ ELLAVHEELVQ IKDAEEGLLHLKRARLLQEADSVLH TNIF
Sbjct: 21  RDSLSAIDQALLSDPTDPELLAVHEELVQAIKDAEEGLLHLKRARLLQEADSVLHNTNIF 80

Query: 379 TEEEKVEPLDPADVEPEPLEEKCYSVGSKCRFRYKDGRWYNGQVVQLDNSMAKISFLTPT 558
           TEE KV+PLDP  VEPEPLE+KCYSVGSKCRFR+KDGRWYNGQVVQLDNS+AK+SFLTPT
Sbjct: 81  TEE-KVDPLDPTYVEPEPLEDKCYSVGSKCRFRHKDGRWYNGQVVQLDNSVAKVSFLTPT 139

Query: 559 SENML 573
           SENML
Sbjct: 140 SENML 144


>ref|XP_002324344.1| predicted protein [Populus trichocarpa] gi|222865778|gb|EEF02909.1|
           predicted protein [Populus trichocarpa]
          Length = 495

 Score =  180 bits (456), Expect = 2e-43
 Identities = 89/126 (70%), Positives = 106/126 (84%), Gaps = 1/126 (0%)
 Frame = +1

Query: 199 RDSLSAIDQALLSDPSNHELLAVHEELVQVIKDAEEGLLHLKRARLLQEADSVLHTTNIF 378
           +DSL+A++ AL SDPSN ELL+V EEL+QVIKD EEGLLHLKRARLL+EADSVLH +   
Sbjct: 22  KDSLAALNDALASDPSNPELLSVQEELLQVIKDVEEGLLHLKRARLLREADSVLHASYHT 81

Query: 379 TEEEKVEPLDPADVEPEPLEEKCYSVGSKCRFRYKDGRWYNGQVVQL-DNSMAKISFLTP 555
            E+ K EPLDP  VEPEPLE++CYSVGSKCRFR+ DGRWYNGQ+++L  +  AKI+FLTP
Sbjct: 82  VEDVKAEPLDPVHVEPEPLEDQCYSVGSKCRFRHVDGRWYNGQIIELVCSDTAKIAFLTP 141

Query: 556 TSENML 573
            SENML
Sbjct: 142 ISENML 147


>emb|CBI21169.3| unnamed protein product [Vitis vinifera]
          Length = 195

 Score =  174 bits (440), Expect = 1e-41
 Identities = 86/126 (68%), Positives = 101/126 (80%), Gaps = 1/126 (0%)
 Frame = +1

Query: 199 RDSLSAIDQALLSDPSNHELLAVHEELVQVIKDAEEGLLHLKRARLLQEADSVLHTTNIF 378
           RDSL+ + +AL+SDP+N ELL+VHEEL+  IKDAEEGL HLKRARLL+EADS LH     
Sbjct: 21  RDSLAVLKEALVSDPTNSELLSVHEELIWAIKDAEEGLFHLKRARLLREADSALHDHKYT 80

Query: 379 TEEEKVEPLDPADVEPEPLEEKCYSVGSKCRFRYKDGRWYNGQVVQLDN-SMAKISFLTP 555
            E+ KVEPLDP+D E EPLEE+ Y VGSKCRFRY DGRWYNG ++ L+    AKISFL+P
Sbjct: 81  AEDVKVEPLDPSDAEAEPLEEQSYHVGSKCRFRYTDGRWYNGVILGLEGLDSAKISFLSP 140

Query: 556 TSENML 573
           TSENML
Sbjct: 141 TSENML 146


>ref|XP_002285580.1| PREDICTED: zinc finger CCCH domain-containing protein 18 [Vitis
           vinifera]
          Length = 496

 Score =  174 bits (440), Expect = 1e-41
 Identities = 86/126 (68%), Positives = 101/126 (80%), Gaps = 1/126 (0%)
 Frame = +1

Query: 199 RDSLSAIDQALLSDPSNHELLAVHEELVQVIKDAEEGLLHLKRARLLQEADSVLHTTNIF 378
           RDSL+ + +AL+SDP+N ELL+VHEEL+  IKDAEEGL HLKRARLL+EADS LH     
Sbjct: 21  RDSLAVLKEALVSDPTNSELLSVHEELIWAIKDAEEGLFHLKRARLLREADSALHDHKYT 80

Query: 379 TEEEKVEPLDPADVEPEPLEEKCYSVGSKCRFRYKDGRWYNGQVVQLDN-SMAKISFLTP 555
            E+ KVEPLDP+D E EPLEE+ Y VGSKCRFRY DGRWYNG ++ L+    AKISFL+P
Sbjct: 81  AEDVKVEPLDPSDAEAEPLEEQSYHVGSKCRFRYTDGRWYNGVILGLEGLDSAKISFLSP 140

Query: 556 TSENML 573
           TSENML
Sbjct: 141 TSENML 146


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