BLASTX nr result

ID: Glycyrrhiza23_contig00017214 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00017214
         (778 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABN09806.1| Polynucleotidyl transferase, Ribonuclease H fold,...   161   1e-37
emb|CAN63182.1| hypothetical protein VITISV_029266 [Vitis vinifera]   156   4e-36
ref|XP_003557045.1| PREDICTED: uncharacterized protein LOC100783...   154   2e-35
gb|AAC33963.1| contains similarity to reverse transcriptases (Pf...   154   2e-35
ref|XP_003549005.1| PREDICTED: uncharacterized protein LOC100789...   153   4e-35

>gb|ABN09806.1| Polynucleotidyl transferase, Ribonuclease H fold, putative
           [Medicago truncatula]
          Length = 188

 Score =  161 bits (408), Expect = 1e-37
 Identities = 79/131 (60%), Positives = 96/131 (73%)
 Frame = -1

Query: 778 GFYTFLGHSLISWKSKKQQTVSRSSIEAEYRALAATTCELQWLTYLLNDLHLPYIHPSLL 599
           GF  FLG SLI+W+SKK+  VS+SS E E+RALAATTCE+QWLTY + DL + +  P+LL
Sbjct: 46  GFCIFLGKSLITWRSKKRAAVSKSSSETEHRALAATTCEIQWLTYRIRDLQVSFTSPALL 105

Query: 598 YCDSSSARHIAANSFFHERTKHVELDYHFVREKLQHKLFQLLPVPSSNQLADCFTKPLDP 419
           Y DS SARHIA+N  FHE TKH+++D HFV EKLQ  LF LLP+ S NQLAD FTK L+ 
Sbjct: 106 YRDSQSARHIASNPTFHECTKHIDIDCHFVCEKLQAHLFHLLPITSINQLADFFTKQLES 165

Query: 418 GPFHNFVGGIG 386
            PF   +   G
Sbjct: 166 APFQRLLSKHG 176


>emb|CAN63182.1| hypothetical protein VITISV_029266 [Vitis vinifera]
          Length = 405

 Score =  156 bits (395), Expect = 4e-36
 Identities = 78/125 (62%), Positives = 91/125 (72%)
 Frame = -1

Query: 778 GFYTFLGHSLISWKSKKQQTVSRSSIEAEYRALAATTCELQWLTYLLNDLHLPYIHPSLL 599
           GF  FLG+SLISWKSKKQ TVSRSS EA+YRALA TTCE+QWL Y L DL + +   +LL
Sbjct: 233 GFAIFLGNSLISWKSKKQVTVSRSSAEAKYRALATTTCEIQWLLYALQDLDIKHSXSTLL 292

Query: 598 YCDSSSARHIAANSFFHERTKHVELDYHFVREKLQHKLFQLLPVPSSNQLADCFTKPLDP 419
           Y DS SA  IA N   HERTKH+++D H VREKLQ  + +L  +PS  QLAD FTKPL  
Sbjct: 293 YTDSKSAMSIATNPIQHERTKHIQIDCHLVREKLQQHVIKLFHIPSRLQLADIFTKPLGS 352

Query: 418 GPFHN 404
            PFH+
Sbjct: 353 LPFHH 357


>ref|XP_003557045.1| PREDICTED: uncharacterized protein LOC100783177 [Glycine max]
          Length = 2219

 Score =  154 bits (390), Expect = 2e-35
 Identities = 74/130 (56%), Positives = 93/130 (71%)
 Frame = -1

Query: 778  GFYTFLGHSLISWKSKKQQTVSRSSIEAEYRALAATTCELQWLTYLLNDLHLPYIHPSLL 599
            G+  F+G SL+SW++KKQ TVSRSS EAEYRAL++  CELQWL YL  DL +       L
Sbjct: 1275 GYCFFIGKSLVSWRAKKQATVSRSSSEAEYRALSSAACELQWLLYLFADLRVQLTRTPTL 1334

Query: 598  YCDSSSARHIAANSFFHERTKHVELDYHFVREKLQHKLFQLLPVPSSNQLADCFTKPLDP 419
            YCD+ SA HIA+N  FHERTKH+E+D H VREKL     +LLPV +S+Q+AD  TK L P
Sbjct: 1335 YCDNQSAVHIASNPVFHERTKHLEIDCHLVREKLLKGTLKLLPVSTSDQVADFLTKALAP 1394

Query: 418  GPFHNFVGGI 389
              FH+F+G +
Sbjct: 1395 PKFHDFIGNL 1404


>gb|AAC33963.1| contains similarity to reverse transcriptases (Pfam; rvt.hmm, score:
            11.19) [Arabidopsis thaliana]
          Length = 1633

 Score =  154 bits (389), Expect = 2e-35
 Identities = 72/127 (56%), Positives = 92/127 (72%)
 Frame = -1

Query: 778  GFYTFLGHSLISWKSKKQQTVSRSSIEAEYRALAATTCELQWLTYLLNDLHLPYIHPSLL 599
            GF  +LG SLI+WKSKKQ  VSRSS E+EYR+LA  TCE+ WL  LL DLH+    P+ L
Sbjct: 1299 GFCIYLGTSLITWKSKKQSVVSRSSTESEYRSLAQATCEIIWLQQLLKDLHVTMTCPAKL 1358

Query: 598  YCDSSSARHIAANSFFHERTKHVELDYHFVREKLQHKLFQLLPVPSSNQLADCFTKPLDP 419
            +CD+ SA H+A N  FHERTKH+E+D H VR++++    + L VP+ NQLAD  TKPL P
Sbjct: 1359 FCDNKSALHLATNPVFHERTKHIEIDCHTVRDQIKAGKLKTLHVPTGNQLADILTKPLHP 1418

Query: 418  GPFHNFV 398
            GPFH+ +
Sbjct: 1419 GPFHSLL 1425


>ref|XP_003549005.1| PREDICTED: uncharacterized protein LOC100789964 [Glycine max]
          Length = 2412

 Score =  153 bits (387), Expect = 4e-35
 Identities = 74/127 (58%), Positives = 91/127 (71%)
 Frame = -1

Query: 778  GFYTFLGHSLISWKSKKQQTVSRSSIEAEYRALAATTCELQWLTYLLNDLHLPYIHPSLL 599
            G+  FLG S+ SWKSKKQ TV+RSS EAEYRALA+ TCELQWL YL  DLH+    P  +
Sbjct: 1549 GYCVFLGTSMQSWKSKKQSTVARSSSEAEYRALASLTCELQWLQYLFKDLHISLDQPISV 1608

Query: 598  YCDSSSARHIAANSFFHERTKHVELDYHFVREKLQHKLFQLLPVPSSNQLADCFTKPLDP 419
            YCD+ SA ++A N  FHERTKH+E+D H +REK+Q  L  LLPV S+ QLAD  TKPL  
Sbjct: 1609 YCDNKSAIYLAHNPIFHERTKHIEIDCHVIREKIQTGLIHLLPVSSAAQLADVLTKPLPA 1668

Query: 418  GPFHNFV 398
              F++ +
Sbjct: 1669 PSFNSLI 1675


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