BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00017174
         (1007 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003537198.1| PREDICTED: pentatricopeptide repeat-containi...   573   e-161
ref|XP_002263704.1| PREDICTED: pentatricopeptide repeat-containi...   438   e-120
ref|XP_004144368.1| PREDICTED: pentatricopeptide repeat-containi...   420   e-115
emb|CAN71514.1| hypothetical protein VITISV_021786 [Vitis vinifera]   389   e-106
ref|NP_190543.1| pentatricopeptide repeat-containing protein [Ar...   365   1e-98

>ref|XP_003537198.1| PREDICTED: pentatricopeptide repeat-containing protein At3g49740-like
            [Glycine max]
          Length = 722

 Score =  573 bits (1478), Expect = e-161
 Identities = 279/334 (83%), Positives = 308/334 (92%)
 Frame = +2

Query: 2    ETLRTVEMIHSLLCKNGLMKVEVLNALISSYCRHGMIKWGFRVFSDLPHKNLISWNSIIS 181
            ++L+ VEMIHSLLCK+GL+K+EVLNAL+S+YCRHG IK  F++FS +P+K+LISWNSIIS
Sbjct: 390  DSLQVVEMIHSLLCKSGLVKIEVLNALVSAYCRHGKIKRAFQIFSGVPYKSLISWNSIIS 449

Query: 182  GFLINGCPLQGLEQFSALLSTTHLKPNVYSLSLVLSICSSTSAMSHGKQVHGYILRHGLS 361
            GFL+NG PLQGLEQFSALLST  +KPN YSLSLVLSICSS SAMSHGKQVHGYILRHG S
Sbjct: 450  GFLMNGHPLQGLEQFSALLST-QVKPNAYSLSLVLSICSSMSAMSHGKQVHGYILRHGFS 508

Query: 362  SETSLGNALVTMYSKCGSLEGSLRVFNTMAERDTISWNALISAYSQHGQGEEAVCCFEAM 541
            SE SLGNALVTMY+KCGSL+ +LRVF+ M ERDTI+WNA+ISAY+QHG+GEEAVCCFEAM
Sbjct: 509  SEVSLGNALVTMYAKCGSLDKALRVFDAMVERDTITWNAIISAYAQHGRGEEAVCCFEAM 568

Query: 542  QISPGIEPDHATFTAVLSACSHAGLVDDGTRIFDMMVKNYGFVPSVDHFSCIVDLLGRSG 721
            Q SPGI+PD ATFT+VLSACSHAGLVDDG RIFD MVK YGFVPSVDHFSCIVDLLGRSG
Sbjct: 569  QTSPGIKPDQATFTSVLSACSHAGLVDDGIRIFDTMVKVYGFVPSVDHFSCIVDLLGRSG 628

Query: 722  YLDEAERVIKDGCFGAHSNICWSLFSACAAHGNLRLGRTVARLLLERDYDNPSVYVLLSN 901
            YLDEAERVIK G FGAHSNICWSLFSACAAHGNL LGRTVARL+LERD++NPSVYVLLSN
Sbjct: 629  YLDEAERVIKSGYFGAHSNICWSLFSACAAHGNLGLGRTVARLILERDHNNPSVYVLLSN 688

Query: 902  ICAAAGQWEEAANLRDMMRGLGTTKQPGCSWIRT 1003
            ICAAAGQWEEAANLR+MMR  GT KQPGCSWIRT
Sbjct: 689  ICAAAGQWEEAANLREMMREFGTIKQPGCSWIRT 722



 Score = 92.0 bits (227), Expect = 2e-16
 Identities = 70/284 (24%), Positives = 133/284 (46%), Gaps = 7/284 (2%)
 Frame = +2

Query: 80  LISSYCRHGMIKWGFRVFSDLPHKNLISWNSIISGFLINGCPLQGLEQFSALL----STT 247
           L+S+  +   ++   +VF  +P  ++  WN++I+G     C  +G   F+  L    +  
Sbjct: 118 LLSACAKLDSVEHALKVFDGIPKGHIAVWNAVITG-----CAEKGNRDFAFGLFRDMNKM 172

Query: 248 HLKPNVYSLSLVLSICSSTSAMSHGKQVHGYILRHGLSSETSLGNALVTMYSKCGSLEGS 427
            +K + Y+ + +LS+CS      +G+ VH  +++ G    TS+ N+L+TMY KCG +  +
Sbjct: 173 GVKADKYTFATMLSLCS-LELFDYGRHVHSVVIKSGFLGWTSVVNSLITMYFKCGCVVDA 231

Query: 428 LRVFNTMAE---RDTISWNALISAYSQHGQGEEAVCCFEAMQISPGIEPDHATFTAVLSA 598
             VF    E   RD +S+NA+I  ++   + E+A   F  MQ     +P   TF +V+S+
Sbjct: 232 CEVFEEAEEGGSRDYVSYNAMIDGFASVERSEDAFLIFRDMQ-KGCFDPTEVTFVSVMSS 290

Query: 599 CSHAGLVDDGTRIFDMMVKNYGFVPSVDHFSCIVDLLGRSGYLDEAERVIKDGCFGAHSN 778
           CS    +  G +     +K  GFV  V   + ++ +    G + E + + +         
Sbjct: 291 CSS---LRAGCQAQSQAIK-MGFVGCVAVNNAMMTMYSGFGEVIEVQNIFEG--MEERDV 344

Query: 779 ICWSLFSACAAHGNLRLGRTVARLLLERDYDNPSVYVLLSNICA 910
           + W++  +     NL     ++ L + R+   P  +   S + A
Sbjct: 345 VSWNIMVSMFLQENLEEEAMLSYLKMRREGIEPDEFTYGSLLAA 388



 Score = 84.0 bits (206), Expect = 5e-14
 Identities = 80/305 (26%), Positives = 147/305 (48%), Gaps = 9/305 (2%)
 Frame = +2

Query: 26   IHSLLCKNGLMK-VEVLNALISSYCRHGMIKWGFRVFSDLPH---KNLISWNSIISGFLI 193
            +HS++ K+G +    V+N+LI+ Y + G +     VF +      ++ +S+N++I GF  
Sbjct: 199  VHSVVIKSGFLGWTSVVNSLITMYFKCGCVVDACEVFEEAEEGGSRDYVSYNAMIDGF-- 256

Query: 194  NGCPLQGLEQFSALLSTTHLKPNVYSLSLV--LSICSSTSAMSHGKQVHGYILRHGLSSE 367
                ++  E   A L    ++   +  + V  +S+ SS S++  G Q     ++ G    
Sbjct: 257  --ASVERSED--AFLIFRDMQKGCFDPTEVTFVSVMSSCSSLRAGCQAQSQAIKMGFVGC 312

Query: 368  TSLGNALVTMYSKCGSLEGSLRVFNTMAERDTISWNALISAYSQHGQGEEAVCCFEAMQI 547
             ++ NA++TMYS  G +     +F  M ERD +SWN ++S + Q    EEA+  +  M+ 
Sbjct: 313  VAVNNAMMTMYSGFGEVIEVQNIFEGMEERDVVSWNIMVSMFLQENLEEEAMLSYLKMR- 371

Query: 548  SPGIEPDHATFTAVLSACSHAGLVDDGTRIFDMMVKNYGFVPSVDHFSCIVDLLGRSGYL 727
              GIEPD  T+ ++L+A     +V+    I  ++ K+ G V  ++  + +V    R G +
Sbjct: 372  REGIEPDEFTYGSLLAATDSLQVVE---MIHSLLCKS-GLV-KIEVLNALVSAYCRHGKI 426

Query: 728  DEAERVIKDGCFGAHSNICW-SLFSACAAHGNLRLGRTVARLLLERDYDNPSVY--VLLS 898
              A ++     +   S I W S+ S    +G+   G      LL      P+ Y   L+ 
Sbjct: 427  KRAFQIFSGVPY--KSLISWNSIISGFLMNGHPLQGLEQFSALLSTQV-KPNAYSLSLVL 483

Query: 899  NICAA 913
            +IC++
Sbjct: 484  SICSS 488


>ref|XP_002263704.1| PREDICTED: pentatricopeptide repeat-containing protein At3g49740-like
            [Vitis vinifera]
          Length = 729

 Score =  438 bits (1126), Expect = e-120
 Identities = 219/333 (65%), Positives = 267/333 (80%), Gaps = 1/333 (0%)
 Frame = +2

Query: 2    ETLRTVEMIHSLLCKNGL-MKVEVLNALISSYCRHGMIKWGFRVFSDLPHKNLISWNSII 178
            E+L  V+M  +L+ KNGL  K+EV NAL+S++ +HG I+  ++VF+++   NLISWN+II
Sbjct: 396  ESLEIVKMFQALVSKNGLNSKIEVSNALVSAFSKHGQIEQAYQVFNNMSSPNLISWNTII 455

Query: 179  SGFLINGCPLQGLEQFSALLSTTHLKPNVYSLSLVLSICSSTSAMSHGKQVHGYILRHGL 358
            SGFL NG  LQGLEQF  LL +T LKPN Y+LS+VLSIC+S SA+ HGKQ+HGYILR G+
Sbjct: 456  SGFLFNGFTLQGLEQFYELLMST-LKPNAYTLSIVLSICASISALRHGKQIHGYILRSGV 514

Query: 359  SSETSLGNALVTMYSKCGSLEGSLRVFNTMAERDTISWNALISAYSQHGQGEEAVCCFEA 538
             S TSLGNAL+TMY+KCG L+ SLR+FN M  RD +SWNA+ISAY+QHG+G+EAV  F+A
Sbjct: 515  FSVTSLGNALITMYAKCGDLDWSLRIFNVMNGRDIVSWNAMISAYAQHGKGKEAVHFFKA 574

Query: 539  MQISPGIEPDHATFTAVLSACSHAGLVDDGTRIFDMMVKNYGFVPSVDHFSCIVDLLGRS 718
            MQ S G++PD ATFTAVLSACSHAGLVDDGTRIF+ MV +YGF P  DH SCIVDLLGR+
Sbjct: 575  MQDSGGVKPDQATFTAVLSACSHAGLVDDGTRIFNSMVNDYGFEPGADHLSCIVDLLGRA 634

Query: 719  GYLDEAERVIKDGCFGAHSNICWSLFSACAAHGNLRLGRTVARLLLERDYDNPSVYVLLS 898
            GYL+EAER+I        S+I W+LFSACAAHGNLRLGR VA  LLE + ++P+VYVLLS
Sbjct: 635  GYLEEAERLINSKHLKIVSSIWWTLFSACAAHGNLRLGRIVAGFLLEIEQNDPAVYVLLS 694

Query: 899  NICAAAGQWEEAANLRDMMRGLGTTKQPGCSWI 997
            NI AAAGQWEEAAN RD+M+     KQPGCSWI
Sbjct: 695  NIYAAAGQWEEAANTRDLMQKTRVAKQPGCSWI 727



 Score =  106 bits (264), Expect = 1e-20
 Identities = 73/246 (29%), Positives = 125/246 (50%), Gaps = 3/246 (1%)
 Frame = +2

Query: 26  IHSLLCKNG-LMKVEVLNALISSYCRHGMIKWGFRVFSDLPHK--NLISWNSIISGFLIN 196
           +H+L+ K G L++  V+NAL++ Y   G +   + VF +      + I++N +I G    
Sbjct: 206 VHTLVIKTGFLVRASVINALLTMYFNSGKVADAYEVFEEAESTVHDDITFNVMIGGLASV 265

Query: 197 GCPLQGLEQFSALLSTTHLKPNVYSLSLVLSICSSTSAMSHGKQVHGYILRHGLSSETSL 376
           G   + L  F  +     L+P   +   V+S CSS + +SH  QVH   ++ G  + T +
Sbjct: 266 GRDEEALIMFKEMQEAC-LRPTELTFVSVMSSCSS-ARVSH--QVHAQAIKMGFEACTPV 321

Query: 377 GNALVTMYSKCGSLEGSLRVFNTMAERDTISWNALISAYSQHGQGEEAVCCFEAMQISPG 556
            NA +TMYS CG+L     VF+ + E+D ISWN +I  Y+Q      A+  F  MQ   G
Sbjct: 322 SNAAMTMYSSCGNLHAVHMVFDRLEEKDLISWNIIIMNYAQGNFYRLAILAFLQMQ-RAG 380

Query: 557 IEPDHATFTAVLSACSHAGLVDDGTRIFDMMVKNYGFVPSVDHFSCIVDLLGRSGYLDEA 736
           IEPD  T  ++L++     +V    ++F  +V   G    ++  + +V    + G +++A
Sbjct: 381 IEPDEFTIGSLLASSESLEIV----KMFQALVSKNGLNSKIEVSNALVSAFSKHGQIEQA 436

Query: 737 ERVIKD 754
            +V  +
Sbjct: 437 YQVFNN 442



 Score = 87.0 bits (214), Expect = 6e-15
 Identities = 68/271 (25%), Positives = 129/271 (47%), Gaps = 2/271 (0%)
 Frame = +2

Query: 11   RTVEMIHSLLCKNGLMK-VEVLNALISSYCRHGMIKWGFRVFSDLPHKNLISWNSIISGF 187
            R    +H+   K G      V NA ++ Y   G +     VF  L  K+LISWN II  +
Sbjct: 301  RVSHQVHAQAIKMGFEACTPVSNAAMTMYSSCGNLHAVHMVFDRLEEKDLISWNIIIMNY 360

Query: 188  LINGCPLQGLEQFSALLSTTHLKPNVYSLSLVLSICSSTSAMSHGKQVHGYILRHGLSSE 367
                     +  F  +     ++P+ +++    S+ +S+ ++   K     + ++GL+S+
Sbjct: 361  AQGNFYRLAILAFLQM-QRAGIEPDEFTIG---SLLASSESLEIVKMFQALVSKNGLNSK 416

Query: 368  TSLGNALVTMYSKCGSLEGSLRVFNTMAERDTISWNALISAYSQHGQGEEAVCCFEAMQI 547
              + NALV+ +SK G +E + +VFN M+  + ISWN +IS +  +G   + +  F  + +
Sbjct: 417  IEVSNALVSAFSKHGQIEQAYQVFNNMSSPNLISWNTIISGFLFNGFTLQGLEQFYELLM 476

Query: 548  SPGIEPDHATFTAVLSACSHAGLVDDGTRIFDMMVKNYGFVPSVDHFSCIVDLLGRSGYL 727
            S  ++P+  T + VLS C+    +  G +I   ++++ G        + ++ +  + G L
Sbjct: 477  ST-LKPNAYTLSIVLSICASISALRHGKQIHGYILRS-GVFSVTSLGNALITMYAKCGDL 534

Query: 728  DEAERVIKDGCFGAHSNICW-SLFSACAAHG 817
            D + R+           + W ++ SA A HG
Sbjct: 535  DWSLRIF--NVMNGRDIVSWNAMISAYAQHG 563



 Score = 82.8 bits (203), Expect = 1e-13
 Identities = 62/246 (25%), Positives = 112/246 (45%), Gaps = 31/246 (12%)
 Frame = +2

Query: 149 KNLISWNSIISGFLINGCPLQGLEQFSALLSTTHLKPNVYSLSLVLSICSSTSAMSHGKQ 328
           + LI  N +++    +      ++ F  + S+ +LKP+ ++LS  L+ C++    + G Q
Sbjct: 15  EQLIKINQLLAELTRSHHNSASVQLFVQIHSSNYLKPDHFTLSSTLTACANLRYAASGNQ 74

Query: 329 VHGYILRHGLSSETSLGNALVTMYSKCGSLEGSLRVFNTMAERDTISWNALISAYSQHGQ 508
           +H Y ++ GL + T +GN L++ Y+K   L    RVFN +   D  SW  L+SA ++ GQ
Sbjct: 75  LHAYSIQTGLKAYTHVGNTLLSFYAKSKDLVSVQRVFNEIENPDVYSWTTLLSACTKLGQ 134

Query: 509 -------------------------------GEEAVCCFEAMQISPGIEPDHATFTAVLS 595
                                           E A+  F  M    G+  D  TF +VLS
Sbjct: 135 IGYACHLFNQTPRMIPVVWNAIITGCAENKHTEIALNLFREMH-QLGVRHDKYTFASVLS 193

Query: 596 ACSHAGLVDDGTRIFDMMVKNYGFVPSVDHFSCIVDLLGRSGYLDEAERVIKDGCFGAHS 775
            CS   L+D G  +  +++K  GF+      + ++ +   SG + +A  V ++     H 
Sbjct: 194 LCS-LELLDFGREVHTLVIKT-GFLVRASVINALLTMYFNSGKVADAYEVFEEAESTVHD 251

Query: 776 NICWSL 793
           +I +++
Sbjct: 252 DITFNV 257



 Score = 80.9 bits (198), Expect = 5e-13
 Identities = 56/181 (30%), Positives = 90/181 (49%), Gaps = 4/181 (2%)
 Frame = +2

Query: 80  LISSYCRHGMIKWGFRVFSDLPHKNLISWNSIISGFLINGCPLQGLEQFSAL--LSTTHL 253
           L+S+  + G I +   +F+  P    + WN+II+G   N      L  F  +  L   H 
Sbjct: 125 LLSACTKLGQIGYACHLFNQTPRMIPVVWNAIITGCAENKHTEIALNLFREMHQLGVRHD 184

Query: 254 KPNVYSLSLVLSICSSTSAMSHGKQVHGYILRHGLSSETSLGNALVTMYSKCGSLEGSLR 433
           K   Y+ + VLS+CS    +  G++VH  +++ G     S+ NAL+TMY   G +  +  
Sbjct: 185 K---YTFASVLSLCS-LELLDFGREVHTLVIKTGFLVRASVINALLTMYFNSGKVADAYE 240

Query: 434 VFNTMAE--RDTISWNALISAYSQHGQGEEAVCCFEAMQISPGIEPDHATFTAVLSACSH 607
           VF        D I++N +I   +  G+ EEA+  F+ MQ    + P   TF +V+S+CS 
Sbjct: 241 VFEEAESTVHDDITFNVMIGGLASVGRDEEALIMFKEMQ-EACLRPTELTFVSVMSSCSS 299

Query: 608 A 610
           A
Sbjct: 300 A 300


>ref|XP_004144368.1| PREDICTED: pentatricopeptide repeat-containing protein At3g49740-like
            [Cucumis sativus]
          Length = 735

 Score =  420 bits (1079), Expect = e-115
 Identities = 203/334 (60%), Positives = 265/334 (79%), Gaps = 1/334 (0%)
 Frame = +2

Query: 2    ETLRTVEMIHSLLCKNGLMKV-EVLNALISSYCRHGMIKWGFRVFSDLPHKNLISWNSII 178
            E +  VEM+H+ + KNGL+ + E+LNAL+S+Y +   +K   +VFS++  KN+ISWN++I
Sbjct: 403  EFIEIVEMVHAYVYKNGLILIIEILNALVSAYAKCRKVKQSLQVFSEINSKNIISWNTVI 462

Query: 179  SGFLINGCPLQGLEQFSALLSTTHLKPNVYSLSLVLSICSSTSAMSHGKQVHGYILRHGL 358
             GFL+NG PLQ LE FS L+ +  LKP+ ++LS+VLSIC++ S +  GKQ+HGYILR G 
Sbjct: 463  YGFLLNGLPLQALEHFSKLIMSK-LKPSTFTLSIVLSICANISTLDIGKQIHGYILRSGN 521

Query: 359  SSETSLGNALVTMYSKCGSLEGSLRVFNTMAERDTISWNALISAYSQHGQGEEAVCCFEA 538
            SSETSL N L+TMYSKCG L  SLR FN M ERD +SWN++ISAY+QHGQG+EAV CF+A
Sbjct: 522  SSETSLCNGLITMYSKCGLLGWSLRTFNVMIERDIVSWNSIISAYAQHGQGKEAVDCFKA 581

Query: 539  MQISPGIEPDHATFTAVLSACSHAGLVDDGTRIFDMMVKNYGFVPSVDHFSCIVDLLGRS 718
            MQ  P I PD ATFT +LSACSHAGLV++  +I D+M+ +Y  VPSVD  SCIVDL+GRS
Sbjct: 582  MQDMPSIMPDQATFTTILSACSHAGLVEEACQILDIMLIDYRAVPSVDQLSCIVDLIGRS 641

Query: 719  GYLDEAERVIKDGCFGAHSNICWSLFSACAAHGNLRLGRTVARLLLERDYDNPSVYVLLS 898
            GY+D+AE VI+   +G H+++ W+LFSACAAH NLRLGR VAR+LLE++ DNPSVYV+LS
Sbjct: 642  GYIDQAESVIESAQYGEHTHVWWALFSACAAHENLRLGRIVARILLEKERDNPSVYVVLS 701

Query: 899  NICAAAGQWEEAANLRDMMRGLGTTKQPGCSWIR 1000
            NI A+AG WEEAAN+R++++  G+ KQPGCSWIR
Sbjct: 702  NIYASAGCWEEAANVRELIKKTGSMKQPGCSWIR 735



 Score = 98.2 bits (243), Expect = 3e-18
 Identities = 70/206 (33%), Positives = 106/206 (51%), Gaps = 7/206 (3%)
 Frame = +2

Query: 26  IHSLLCKNG-LMKVEVLNALISSYCRHGMIKWGFRVF--SDLPHKNLISWNSIISGFLIN 196
           +HS + K G L K  V+NALI+ Y     ++  + VF  ++   ++ I++N +I G +  
Sbjct: 213 VHSSVIKAGYLRKTSVVNALITMYFSIENLEDAYEVFEGTESEVRDQITYNVMIDGLVCV 272

Query: 197 GCPLQGLEQFS----ALLSTTHLKPNVYSLSLVLSICSSTSAMSHGKQVHGYILRHGLSS 364
               + L  F     A LS T L          +SI SS S +   +QVH   ++ G  S
Sbjct: 273 RRNEEALIMFKDMKRACLSPTELT--------FVSIMSSCSIIQVAQQVHSQAIKLGFES 324

Query: 365 ETSLGNALVTMYSKCGSLEGSLRVFNTMAERDTISWNALISAYSQHGQGEEAVCCFEAMQ 544
            T +GN+ +TMY+ CG  + +  VF  + E+D ISWNA+IS+Y Q   G+ AV  F  MQ
Sbjct: 325 FTLVGNSTITMYTSCGEFQAANAVFQMLIEKDLISWNAIISSYVQGNFGKSAVLAFLQMQ 384

Query: 545 ISPGIEPDHATFTAVLSACSHAGLVD 622
              GI PD  TF ++L       +V+
Sbjct: 385 -RTGIGPDEFTFGSLLGVSEFIEIVE 409



 Score = 86.3 bits (212), Expect = 1e-14
 Identities = 55/177 (31%), Positives = 97/177 (54%), Gaps = 2/177 (1%)
 Frame = +2

Query: 80  LISSYCRHGMIKWGFRVFSDLPHKNLISWNSIISGFLINGCPLQGLEQFSALLSTTHLKP 259
           L+S+  + G I++   +F  +P  N+  WN++I+G   +G     +  F  +     +KP
Sbjct: 132 LLSACTKMGHIEYASEMFDIMPKGNVACWNAMITGSAESGLDWVAMNTFYEM-HKMGVKP 190

Query: 260 NVYSLSLVLSICSSTSAMSHGKQVHGYILRHGLSSETSLGNALVTMYSKCGSLEGSLRVF 439
           + YS + +LS+C+       G+QVH  +++ G   +TS+ NAL+TMY    +LE +  VF
Sbjct: 191 DNYSFACILSLCTK-EIEDLGRQVHSSVIKAGYLRKTSVVNALITMYFSIENLEDAYEVF 249

Query: 440 -NTMAE-RDTISWNALISAYSQHGQGEEAVCCFEAMQISPGIEPDHATFTAVLSACS 604
             T +E RD I++N +I       + EEA+  F+ M+    + P   TF +++S+CS
Sbjct: 250 EGTESEVRDQITYNVMIDGLVCVRRNEEALIMFKDMK-RACLSPTELTFVSIMSSCS 305



 Score = 73.2 bits (178), Expect = 9e-11
 Identities = 52/241 (21%), Positives = 112/241 (46%), Gaps = 32/241 (13%)
 Frame = +2

Query: 125 RVFSDLPHKNLISWNSIISGFLINGCPLQGLEQFSALLSTT--HLKPNVYSLSLVLSICS 298
           +  ++   ++L+ +N +++    +   +  L+ F+ + S+   ++KP+ Y+LS  L++C+
Sbjct: 12  KTIAESASQDLLEYNRLLAELKRSSRYIDSLQLFTQIHSSHCFNIKPDHYNLSTTLAVCA 71

Query: 299 STSAMSHGKQVHGYILRHGLSSETSLGNALVTMYSKCGSLEGSLRVFNTMAERDTISWNA 478
           +   ++ G Q+HGY +R GL     + N ++++Y+K        R F  + + D  SW  
Sbjct: 72  NFRDIAFGSQLHGYAIRSGLKFYPHVANTVLSLYAKIEDFVSLKRGFQEIEKPDVYSWTT 131

Query: 479 LISAYSQHGQGEEA-----------VCCFEAM-------------------QISPGIEPD 568
           L+SA ++ G  E A           V C+ AM                       G++PD
Sbjct: 132 LLSACTKMGHIEYASEMFDIMPKGNVACWNAMITGSAESGLDWVAMNTFYEMHKMGVKPD 191

Query: 569 HATFTAVLSACSHAGLVDDGTRIFDMMVKNYGFVPSVDHFSCIVDLLGRSGYLDEAERVI 748
           + +F  +LS C+   + D G ++   ++K  G++      + ++ +      L++A  V 
Sbjct: 192 NYSFACILSLCTKE-IEDLGRQVHSSVIK-AGYLRKTSVVNALITMYFSIENLEDAYEVF 249

Query: 749 K 751
           +
Sbjct: 250 E 250


>emb|CAN71514.1| hypothetical protein VITISV_021786 [Vitis vinifera]
          Length = 690

 Score =  389 bits (998), Expect = e-106
 Identities = 202/333 (60%), Positives = 245/333 (73%), Gaps = 1/333 (0%)
 Frame = +2

Query: 2    ETLRTVEMIHSLLCKNGL-MKVEVLNALISSYCRHGMIKWGFRVFSDLPHKNLISWNSII 178
            E+L  V+M  +L+ KNGL  K+EV NAL+S++ +HG I+  +                  
Sbjct: 385  ESLEIVKMFQALVSKNGLNSKIEVSNALVSAFSKHGQIEQAY------------------ 426

Query: 179  SGFLINGCPLQGLEQFSALLSTTHLKPNVYSLSLVLSICSSTSAMSHGKQVHGYILRHGL 358
                      QGLEQF  LL +T LKPN Y+LS+VLSIC+S SA+ HGKQ+HGYILR G+
Sbjct: 427  ----------QGLEQFYELLMST-LKPNAYTLSIVLSICASISALRHGKQIHGYILRSGV 475

Query: 359  SSETSLGNALVTMYSKCGSLEGSLRVFNTMAERDTISWNALISAYSQHGQGEEAVCCFEA 538
             S TSLGNAL+TMY+KCG L+ SLR+FN M  RD +SWNA+ISAY+QHG+G+EAV  F+A
Sbjct: 476  FSVTSLGNALITMYAKCGDLDWSLRIFNVMNGRDIVSWNAMISAYAQHGKGKEAVHFFKA 535

Query: 539  MQISPGIEPDHATFTAVLSACSHAGLVDDGTRIFDMMVKNYGFVPSVDHFSCIVDLLGRS 718
            MQ S G++PD ATFTAVLSACSHAGLVDDGTRIF+ MV +YGF P  DH SCIVDLLGR+
Sbjct: 536  MQDSGGVKPDQATFTAVLSACSHAGLVDDGTRIFNSMVNDYGFEPGADHLSCIVDLLGRA 595

Query: 719  GYLDEAERVIKDGCFGAHSNICWSLFSACAAHGNLRLGRTVARLLLERDYDNPSVYVLLS 898
            GYL+EAER+I        S+I W+LFSACAAHGNLRLGR VA  LLE + ++P+VYVLLS
Sbjct: 596  GYLEEAERLINSKHLKIVSSIWWTLFSACAAHGNLRLGRIVAGFLLEIEQNDPAVYVLLS 655

Query: 899  NICAAAGQWEEAANLRDMMRGLGTTKQPGCSWI 997
            NI AAAGQWEEAAN RD+M+     KQPGCSWI
Sbjct: 656  NIYAAAGQWEEAANTRDLMQKTRVAKQPGCSWI 688



 Score = 82.8 bits (203), Expect = 1e-13
 Identities = 62/246 (25%), Positives = 112/246 (45%), Gaps = 31/246 (12%)
 Frame = +2

Query: 149 KNLISWNSIISGFLINGCPLQGLEQFSALLSTTHLKPNVYSLSLVLSICSSTSAMSHGKQ 328
           + LI  N +++    +      ++ F  + S+ +LKP+ ++LS  L+ C++    + G Q
Sbjct: 21  EQLIKINQLLAELTRSHHNSASVQLFVQIHSSNYLKPDHFTLSSTLTACANLRYAASGNQ 80

Query: 329 VHGYILRHGLSSETSLGNALVTMYSKCGSLEGSLRVFNTMAERDTISWNALISAYSQHGQ 508
           +H Y ++ GL + T +GN L++ Y+K   L    RVFN +   D  SW  L+SA ++ GQ
Sbjct: 81  LHAYSIQTGLKAYTHVGNTLLSFYAKSKDLVSVQRVFNEIENPDVYSWTTLLSACTKLGQ 140

Query: 509 -------------------------------GEEAVCCFEAMQISPGIEPDHATFTAVLS 595
                                           E A+  F  M    G+  D  TF +VLS
Sbjct: 141 IGYACHLFNQTPRMIPVVWNAIITGCAENKHTEIALNLFREMH-QLGVRHDKYTFASVLS 199

Query: 596 ACSHAGLVDDGTRIFDMMVKNYGFVPSVDHFSCIVDLLGRSGYLDEAERVIKDGCFGAHS 775
            CS   L+D G  +  +++K  GF+      + ++ +   SG + +A  V ++     H 
Sbjct: 200 LCS-LELLDFGREVHTLVIKT-GFLVRASVINALLTMYFNSGKVADAYEVFEEAESTVHD 257

Query: 776 NICWSL 793
           +I +++
Sbjct: 258 DITFNV 263



 Score = 80.9 bits (198), Expect = 5e-13
 Identities = 56/181 (30%), Positives = 90/181 (49%), Gaps = 4/181 (2%)
 Frame = +2

Query: 80  LISSYCRHGMIKWGFRVFSDLPHKNLISWNSIISGFLINGCPLQGLEQFSAL--LSTTHL 253
           L+S+  + G I +   +F+  P    + WN+II+G   N      L  F  +  L   H 
Sbjct: 131 LLSACTKLGQIGYACHLFNQTPRMIPVVWNAIITGCAENKHTEIALNLFREMHQLGVRHD 190

Query: 254 KPNVYSLSLVLSICSSTSAMSHGKQVHGYILRHGLSSETSLGNALVTMYSKCGSLEGSLR 433
           K   Y+ + VLS+CS    +  G++VH  +++ G     S+ NAL+TMY   G +  +  
Sbjct: 191 K---YTFASVLSLCS-LELLDFGREVHTLVIKTGFLVRASVINALLTMYFNSGKVADAYE 246

Query: 434 VFNTMAE--RDTISWNALISAYSQHGQGEEAVCCFEAMQISPGIEPDHATFTAVLSACSH 607
           VF        D I++N +I   +  G+ EEA+  F+ MQ    + P   TF +V+S+CS 
Sbjct: 247 VFEEAESTVHDDITFNVMIGGLASVGRDEEALIMFKEMQ-EACLRPTELTFVSVMSSCSS 305

Query: 608 A 610
           A
Sbjct: 306 A 306



 Score = 77.8 bits (190), Expect = 4e-12
 Identities = 78/320 (24%), Positives = 139/320 (43%), Gaps = 56/320 (17%)
 Frame = +2

Query: 26   IHSLLCKNG-LMKVEVLNALISSYCRHGMIKWGFRVFSDLPHK--NLISWNSIISGFLIN 196
            +H+L+ K G L++  V+NAL++ Y   G +   + VF +      + I++N +I G    
Sbjct: 212  VHTLVIKTGFLVRASVINALLTMYFNSGKVADAYEVFEEAESTVHDDITFNVMIGGLASV 271

Query: 197  GCPLQGLEQFSALLSTTHLKPNVYSLSLVLSICSSTSAMSHGKQVHGYILRHGLSSETSL 376
            G   + L  F  +     L+P   +   V+S CSS + +SH  QVH   ++ G  + T +
Sbjct: 272  GRDEEALIMFKEMQEAC-LRPTELTFVSVMSSCSS-ARVSH--QVHAQAIKMGFEACTPV 327

Query: 377  GNALVTMYSKCGSLE-----------------------------------GSL------- 430
             NA +TMYS CG+L                                    GSL       
Sbjct: 328  SNAAMTMYSSCGNLHAVHMVFDRLGNFYRLAILAFLQMQRAGIEPDEFTIGSLLASSESL 387

Query: 431  ---RVFNTMAERDTIS-----WNALISAYSQHGQGEEAVCCFEAMQ--ISPGIEPDHATF 580
               ++F  +  ++ ++      NAL+SA+S+HGQ E+A    E     +   ++P+  T 
Sbjct: 388  EIVKMFQALVSKNGLNSKIEVSNALVSAFSKHGQIEQAYQGLEQFYELLMSTLKPNAYTL 447

Query: 581  TAVLSACSHAGLVDDGTRIFDMMVKNYGFVPSVDHFSCIVDLLGRSGYLDEAERVIKDGC 760
            + VLS C+    +  G +I   ++++ G        + ++ +  + G LD + R+     
Sbjct: 448  SIVLSICASISALRHGKQIHGYILRS-GVFSVTSLGNALITMYAKCGDLDWSLRIF--NV 504

Query: 761  FGAHSNICW-SLFSACAAHG 817
                  + W ++ SA A HG
Sbjct: 505  MNGRDIVSWNAMISAYAQHG 524


>ref|NP_190543.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
            gi|75183390|sp|Q9M2Y4.1|PP276_ARATH RecName:
            Full=Pentatricopeptide repeat-containing protein
            At3g49740 gi|6723419|emb|CAB66912.1| putative protein
            [Arabidopsis thaliana] gi|332645063|gb|AEE78584.1|
            pentatricopeptide repeat-containing protein [Arabidopsis
            thaliana]
          Length = 737

 Score =  365 bits (936), Expect = 1e-98
 Identities = 181/335 (54%), Positives = 247/335 (73%), Gaps = 4/335 (1%)
 Frame = +2

Query: 8    LRTVEMIHSLLCKNGLM-KVEVLNALISSYCRHGMIKWGFRVFSDLPHKNLISWNSIISG 184
            L  +EM+ + + K GL  K+E+ NALIS+Y ++G I+    +F     KNLISWN+IISG
Sbjct: 402  LDVLEMVQACIIKFGLSSKIEISNALISAYSKNGQIEKADLLFERSLRKNLISWNAIISG 461

Query: 185  FLINGCPLQGLEQFSALL-STTHLKPNVYSLSLVLSICSSTSAMSHGKQVHGYILRHGLS 361
            F  NG P +GLE+FS LL S   + P+ Y+LS +LSIC STS++  G Q H Y+LRHG  
Sbjct: 462  FYHNGFPFEGLERFSCLLESEVRILPDAYTLSTLLSICVSTSSLMLGSQTHAYVLRHGQF 521

Query: 362  SETSLGNALVTMYSKCGSLEGSLRVFNTMAERDTISWNALISAYSQHGQGEEAVCCFEAM 541
             ET +GNAL+ MYS+CG+++ SL VFN M+E+D +SWN+LISAYS+HG+GE AV  ++ M
Sbjct: 522  KETLIGNALINMYSQCGTIQNSLEVFNQMSEKDVVSWNSLISAYSRHGEGENAVNTYKTM 581

Query: 542  QISPGIEPDHATFTAVLSACSHAGLVDDGTRIFDMMVKNYGFVPSVDHFSCIVDLLGRSG 721
            Q    + PD ATF+AVLSACSHAGLV++G  IF+ MV+ +G + +VDHFSC+VDLLGR+G
Sbjct: 582  QDEGKVIPDAATFSAVLSACSHAGLVEEGLEIFNSMVEFHGVIRNVDHFSCLVDLLGRAG 641

Query: 722  YLDEAERVIK--DGCFGAHSNICWSLFSACAAHGNLRLGRTVARLLLERDYDNPSVYVLL 895
            +LDEAE ++K  +   G+  ++ W+LFSACAAHG+L+LG+ VA+LL+E++ D+PSVYV L
Sbjct: 642  HLDEAESLVKISEKTIGSRVDVWWALFSACAAHGDLKLGKMVAKLLMEKEKDDPSVYVQL 701

Query: 896  SNICAAAGQWEEAANLRDMMRGLGTTKQPGCSWIR 1000
            SNI A AG W+EA   R  +  +G  KQ GCSW+R
Sbjct: 702  SNIYAGAGMWKEAEETRRAINMIGAMKQRGCSWMR 736



 Score = 90.9 bits (224), Expect = 4e-16
 Identities = 66/248 (26%), Positives = 126/248 (50%), Gaps = 8/248 (3%)
 Frame = +2

Query: 20  EMIHSLLCKNGL-MKVEVLNALISSYCRHGMIKWGFRVF--SDLPHKNLISWNSIISGFL 190
           + +HSL+ K G  +   V+NALI+ Y    ++     VF  +D+  ++ +++N +I G  
Sbjct: 209 KQVHSLVIKAGFFIASSVVNALITMYFNCQVVVDACLVFEETDVAVRDQVTFNVVIDG-- 266

Query: 191 INGCPLQGLEQFSALLS-----TTHLKPNVYSLSLVLSICSSTSAMSHGKQVHGYILRHG 355
                L G ++  +LL         L+P   +   V+  CS  +AM H  QVHG  ++ G
Sbjct: 267 -----LAGFKRDESLLVFRKMLEASLRPTDLTFVSVMGSCSC-AAMGH--QVHGLAIKTG 318

Query: 356 LSSETSLGNALVTMYSKCGSLEGSLRVFNTMAERDTISWNALISAYSQHGQGEEAVCCFE 535
               T + NA +TMYS       + +VF ++ E+D ++WN +IS+Y+Q   G+ A+  ++
Sbjct: 319 YEKYTLVSNATMTMYSSFEDFGAAHKVFESLEEKDLVTWNTMISSYNQAKLGKSAMSVYK 378

Query: 536 AMQISPGIEPDHATFTAVLSACSHAGLVDDGTRIFDMMVKNYGFVPSVDHFSCIVDLLGR 715
            M I  G++PD  TF ++L+      L  D   +    +  +G    ++  + ++    +
Sbjct: 379 RMHII-GVKPDEFTFGSLLA----TSLDLDVLEMVQACIIKFGLSSKIEISNALISAYSK 433

Query: 716 SGYLDEAE 739
           +G +++A+
Sbjct: 434 NGQIEKAD 441



 Score = 76.6 bits (187), Expect = 9e-12
 Identities = 55/197 (27%), Positives = 104/197 (52%), Gaps = 5/197 (2%)
 Frame = +2

Query: 80  LISSYCRHGMIKWGFRVFSDLPHKNLIS-WNSIISGFLINGCPLQGLEQFSAL--LSTTH 250
           L+S+  + G I++ F VF  +P ++ ++ WN++I+G   +G     +E F  +  L   H
Sbjct: 129 LLSASFKLGDIEYAFEVFDKMPERDDVAIWNAMITGCKESGYHETSVELFREMHKLGVRH 188

Query: 251 LKPNVYSLSLVLSICSSTSAMSHGKQVHGYILRHGLSSETSLGNALVTMYSKCGSLEGSL 430
            K   +  + +LS+C   S +  GKQVH  +++ G    +S+ NAL+TMY  C  +  + 
Sbjct: 189 DK---FGFATILSMCDYGS-LDFGKQVHSLVIKAGFFIASSVVNALITMYFNCQVVVDAC 244

Query: 431 RVF--NTMAERDTISWNALISAYSQHGQGEEAVCCFEAMQISPGIEPDHATFTAVLSACS 604
            VF    +A RD +++N +I   +   + +E++  F  M +   + P   TF +V+ +CS
Sbjct: 245 LVFEETDVAVRDQVTFNVVIDGLAGF-KRDESLLVFRKM-LEASLRPTDLTFVSVMGSCS 302

Query: 605 HAGLVDDGTRIFDMMVK 655
            A +   G ++  + +K
Sbjct: 303 CAAM---GHQVHGLAIK 316



 Score = 73.2 bits (178), Expect = 9e-11
 Identities = 47/167 (28%), Positives = 81/167 (48%)
 Frame = +2

Query: 155 LISWNSIISGFLINGCPLQGLEQFSALLSTTHLKPNVYSLSLVLSICSSTSAMSHGKQVH 334
           L++ N  ++G   +G     L+ F+ +   T L+P+ YS+SL ++          G QVH
Sbjct: 21  LLNLNRRLTGLTRSGENRNALKLFADVHRCTTLRPDQYSVSLAITTARHLRDTIFGGQVH 80

Query: 335 GYILRHGLSSETSLGNALVTMYSKCGSLEGSLRVFNTMAERDTISWNALISAYSQHGQGE 514
            Y +R GL   + + N L+++Y + G+L    + F+ + E D  SW  L+SA  + G  E
Sbjct: 81  CYAIRSGLLCHSHVSNTLLSLYERLGNLASLKKKFDEIDEPDVYSWTTLLSASFKLGDIE 140

Query: 515 EAVCCFEAMQISPGIEPDHATFTAVLSACSHAGLVDDGTRIFDMMVK 655
            A   F+ M        D A + A+++ C  +G  +    +F  M K
Sbjct: 141 YAFEVFDKMP----ERDDVAIWNAMITGCKESGYHETSVELFREMHK 183