BLASTX nr result

ID: Glycyrrhiza23_contig00017140 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00017140
         (540 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003599982.1| Microtubule-associated protein TORTIFOLIA1 [...   148   5e-34
ref|XP_004166753.1| PREDICTED: microtubule-associated protein TO...   140   1e-31
ref|XP_003553106.1| PREDICTED: microtubule-associated protein TO...   140   1e-31
emb|CAD45375.1| potyviral helper component protease-interacting ...   133   2e-29
ref|NP_194436.2| Microtubule-associated protein TORTIFOLIA1 [Ara...   125   5e-27

>ref|XP_003599982.1| Microtubule-associated protein TORTIFOLIA1 [Medicago truncatula]
           gi|355489030|gb|AES70233.1| Microtubule-associated
           protein TORTIFOLIA1 [Medicago truncatula]
          Length = 924

 Score =  148 bits (374), Expect = 5e-34
 Identities = 76/113 (67%), Positives = 87/113 (76%)
 Frame = +1

Query: 202 MKNSKPHNQXXXXXXXXXXXXXXXXXXHLAMVELKQRILTSLSKLSDRDTHQIAVEDLER 381
           MKN+KP  Q                  HLAMVELKQ+ILTSLSKLSDRDTHQIA+EDLE+
Sbjct: 1   MKNTKPQTQSTPSSRSSSLSS------HLAMVELKQKILTSLSKLSDRDTHQIALEDLEK 54

Query: 382 TIQSLSPDAIPMILNCLYDAVSDPKPAVKNESLRLLTVVCADHHHSAAPHLTK 540
           TI SL+PDAIPMILNCLY+AVSDPKP++KNESLRLL+ VC+ H HS +PHL K
Sbjct: 55  TILSLTPDAIPMILNCLYEAVSDPKPSIKNESLRLLSFVCSSHPHSTSPHLPK 107


>ref|XP_004166753.1| PREDICTED: microtubule-associated protein TORTIFOLIA1-like [Cucumis
           sativus]
          Length = 926

 Score =  140 bits (354), Expect = 1e-31
 Identities = 73/116 (62%), Positives = 85/116 (73%)
 Frame = +1

Query: 193 PTQMKNSKPHNQXXXXXXXXXXXXXXXXXXHLAMVELKQRILTSLSKLSDRDTHQIAVED 372
           P   + SKP NQ                  HLAMVELKQRILT+LSKL+DRDTHQIA++D
Sbjct: 6   PKSSRPSKPPNQSPPTSRSSASSLSS----HLAMVELKQRILTALSKLADRDTHQIAIDD 61

Query: 373 LERTIQSLSPDAIPMILNCLYDAVSDPKPAVKNESLRLLTVVCADHHHSAAPHLTK 540
           LE+ IQS+SP+AIPM+LNCLYD+ +DPKPAVK ESLRLLTVVCA H  S + HLTK
Sbjct: 62  LEKIIQSISPEAIPMLLNCLYDSSADPKPAVKKESLRLLTVVCASHSDSTSTHLTK 117


>ref|XP_003553106.1| PREDICTED: microtubule-associated protein TORTIFOLIA1-like [Glycine
           max]
          Length = 923

 Score =  140 bits (353), Expect = 1e-31
 Identities = 69/86 (80%), Positives = 75/86 (87%)
 Frame = +1

Query: 283 HLAMVELKQRILTSLSKLSDRDTHQIAVEDLERTIQSLSPDAIPMILNCLYDAVSDPKPA 462
           HLAMVELKQ+ILTSLSKLSDRDTHQIAVEDLE+TI  LSPDAIPMILNCLYDA +DPKPA
Sbjct: 26  HLAMVELKQKILTSLSKLSDRDTHQIAVEDLEKTISGLSPDAIPMILNCLYDAATDPKPA 85

Query: 463 VKNESLRLLTVVCADHHHSAAPHLTK 540
           VK ++LRLL  VC  H  +AA HLTK
Sbjct: 86  VKRDALRLLAAVCGAHSDAAAAHLTK 111


>emb|CAD45375.1| potyviral helper component protease-interacting protein 2 [Solanum
           tuberosum subsp. andigenum]
          Length = 862

 Score =  133 bits (335), Expect = 2e-29
 Identities = 70/112 (62%), Positives = 78/112 (69%)
 Frame = +1

Query: 205 KNSKPHNQXXXXXXXXXXXXXXXXXXHLAMVELKQRILTSLSKLSDRDTHQIAVEDLERT 384
           K SKP  Q                  H AM+ELKQRILTS+SKLSDRDTHQIAVEDLE+ 
Sbjct: 10  KPSKPTPQSSSAPPSRSSSSSSSLSTHFAMIELKQRILTSISKLSDRDTHQIAVEDLEKI 69

Query: 385 IQSLSPDAIPMILNCLYDAVSDPKPAVKNESLRLLTVVCADHHHSAAPHLTK 540
           IQ+LS D + M+LNCLYDA +DPKPAVK E+LRLL  VCA H  SAA HLTK
Sbjct: 70  IQTLSNDGVSMLLNCLYDASNDPKPAVKKETLRLLPTVCASHGDSAATHLTK 121


>ref|NP_194436.2| Microtubule-associated protein TORTIFOLIA1 [Arabidopsis thaliana]
           gi|83288274|sp|Q9T041.2|MAPT_ARATH RecName:
           Full=Microtubule-associated protein TORTIFOLIA1;
           AltName: Full=Microtubule-associated protein SPIRAL2;
           AltName: Full=Protein CONVOLUTA
           gi|51870567|emb|CAC80696.2| TORTIFOLIA1
           microtubule-associated protein [Arabidopsis thaliana]
           gi|53791209|dbj|BAD54701.1| microtubule associated
           protein SPIRAL2 [Arabidopsis thaliana]
           gi|332659895|gb|AEE85295.1| Microtubule-associated
           protein TORTIFOLIA1 [Arabidopsis thaliana]
          Length = 864

 Score =  125 bits (313), Expect = 5e-27
 Identities = 61/84 (72%), Positives = 72/84 (85%)
 Frame = +1

Query: 289 AMVELKQRILTSLSKLSDRDTHQIAVEDLERTIQSLSPDAIPMILNCLYDAVSDPKPAVK 468
           AMVELKQ+ILTS+SKL+DRDT+QIAVEDLE+TIQSL+P+ +PM LNCLYD+ SDPKPAVK
Sbjct: 38  AMVELKQKILTSISKLADRDTYQIAVEDLEKTIQSLTPETLPMFLNCLYDSCSDPKPAVK 97

Query: 469 NESLRLLTVVCADHHHSAAPHLTK 540
            E L LL+ VC+ H  S A HLTK
Sbjct: 98  KECLHLLSYVCSLHCDSTAAHLTK 121


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