BLASTX nr result

ID: Glycyrrhiza23_contig00017139 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00017139
         (726 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003533266.1| PREDICTED: pentatricopeptide repeat-containi...   187   2e-45
ref|XP_002512332.1| pentatricopeptide repeat-containing protein,...   171   1e-40
emb|CAN73347.1| hypothetical protein VITISV_037919 [Vitis vinifera]   168   1e-39
ref|XP_003619716.1| Pentatricopeptide repeat-containing protein ...   166   5e-39
ref|XP_002272959.2| PREDICTED: uncharacterized protein LOC100251...   144   1e-32

>ref|XP_003533266.1| PREDICTED: pentatricopeptide repeat-containing protein At2g40240,
           mitochondrial-like [Glycine max]
          Length = 332

 Score =  187 bits (475), Expect = 2e-45
 Identities = 91/131 (69%), Positives = 108/131 (82%)
 Frame = -1

Query: 726 VLKEMEEEGLGADARTFDALVLGACRAGKVEGAMVLVRRMVDDGIPMLYSTHMYVIEALL 547
           VLK MEE+G+GAD RTFDALVLGACRAGKVEGAMV+VRRMVDDG+PMLYSTHM +I  LL
Sbjct: 195 VLKRMEEDGVGADPRTFDALVLGACRAGKVEGAMVVVRRMVDDGVPMLYSTHMCIIGTLL 254

Query: 546 KMGCYEQAVRYVKGFSGKDRVLDSEIFGCLGIKLVRLRRFEEAMLVLSEMKKRGLTMGYK 367
           KM CYE A++YV+ F GKD++LDSE+ GCL  KLV L+R +E M VL EMK++G+ MG+K
Sbjct: 255 KMKCYELAMKYVRVFVGKDKLLDSELLGCLACKLVNLKRVKEGMSVLEEMKQKGVPMGHK 314

Query: 366 LRDFYEMRV*N 334
           L  FYEM   N
Sbjct: 315 LNKFYEMNAGN 325


>ref|XP_002512332.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223548293|gb|EEF49784.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 619

 Score =  171 bits (434), Expect = 1e-40
 Identities = 83/129 (64%), Positives = 105/129 (81%)
 Frame = -1

Query: 726 VLKEMEEEGLGADARTFDALVLGACRAGKVEGAMVLVRRMVDDGIPMLYSTHMYVIEALL 547
           V+K +EEEGLGADART+DALVLGACR GKVE A+V++RRMVDDG+ +LYSTH++VI ALL
Sbjct: 487 VMKRIEEEGLGADARTYDALVLGACRTGKVEAALVVLRRMVDDGVHVLYSTHVHVINALL 546

Query: 546 KMGCYEQAVRYVKGFSGKDRVLDSEIFGCLGIKLVRLRRFEEAMLVLSEMKKRGLTMGYK 367
           ++GCY QA ++V  F G+D   D+EIFG L  KL++L RFEEA LVL EM++RGL MG K
Sbjct: 547 RLGCYVQATKFVMIFGGRDIAFDTEIFGILASKLIKLERFEEAKLVLKEMEERGLVMGDK 606

Query: 366 LRDFYEMRV 340
           LRD+  + V
Sbjct: 607 LRDYCYVNV 615


>emb|CAN73347.1| hypothetical protein VITISV_037919 [Vitis vinifera]
          Length = 330

 Score =  168 bits (425), Expect = 1e-39
 Identities = 83/130 (63%), Positives = 104/130 (80%), Gaps = 1/130 (0%)
 Frame = -1

Query: 726 VLKEMEEEGLGADARTFDALVLGACRAGKVEGAMVLVRRMVDDGIPMLYSTHMYVIEALL 547
           VL EMEEEG+ ADART+DALVLGAC+AGKVEGAMV++RRM DDG+P+LYSTH +VI  LL
Sbjct: 197 VLTEMEEEGMAADARTYDALVLGACKAGKVEGAMVVLRRMEDDGVPILYSTHAHVINGLL 256

Query: 546 KMGCYEQAVRYVKGFSGKDRVLDSEIFGCLGIKLVRLRRFEEAMLVLSEMKKRGLTM-GY 370
           K+G Y QAV +V    GKD+ LD E FG LG +L+ L+RFEEA LVL EM++RG+ M   
Sbjct: 257 KLGYYAQAVEFVMICGGKDKKLDEESFGILGSRLINLKRFEEAKLVLKEMRRRGIVMRSN 316

Query: 369 KLRDFYEMRV 340
           +L+DFYE+ +
Sbjct: 317 ELQDFYELHI 326


>ref|XP_003619716.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355494731|gb|AES75934.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 333

 Score =  166 bits (420), Expect = 5e-39
 Identities = 87/141 (61%), Positives = 108/141 (76%)
 Frame = -1

Query: 726 VLKEMEEEGLGADARTFDALVLGACRAGKVEGAMVLVRRMVDDGIPMLYSTHMYVIEALL 547
           VL+ MEEEG   D+RT+DALVLGACR   V GAMVLVRRMVDDG PMLYSTHM+VIEAL+
Sbjct: 195 VLRTMEEEGFCFDSRTYDALVLGACRKRNVVGAMVLVRRMVDDGAPMLYSTHMFVIEALV 254

Query: 546 KMGCYEQAVRYVKGFSGKDRVLDSEIFGCLGIKLVRLRRFEEAMLVLSEMKKRGLTMGYK 367
           K   +EQA+ YV+ FSGKD+ LD E+FGCLG KL+ + + +EAMLVL EM ++GL M   
Sbjct: 255 KRDLFEQALSYVRCFSGKDKGLDCELFGCLGGKLMGMSKLKEAMLVLREMDEKGLKMCKN 314

Query: 366 LRDFYEMRV*NWKSDDDKM*E 304
           +R+FY+M V     +DDK+ E
Sbjct: 315 VREFYDMNV--GVENDDKLLE 333


>ref|XP_002272959.2| PREDICTED: uncharacterized protein LOC100251820 [Vitis vinifera]
          Length = 613

 Score =  144 bits (364), Expect = 1e-32
 Identities = 71/105 (67%), Positives = 85/105 (80%)
 Frame = -1

Query: 726 VLKEMEEEGLGADARTFDALVLGACRAGKVEGAMVLVRRMVDDGIPMLYSTHMYVIEALL 547
           VL EMEEEG+ ADART+DALVLGAC+AGKVEGAMV++RRM DDG+P+LYSTH +VI  LL
Sbjct: 197 VLTEMEEEGMAADARTYDALVLGACKAGKVEGAMVVLRRMEDDGVPILYSTHAHVINGLL 256

Query: 546 KMGCYEQAVRYVKGFSGKDRVLDSEIFGCLGIKLVRLRRFEEAML 412
           K+G Y QAV +V    GKD+ LD E FG LG +L+ L+RFEEA L
Sbjct: 257 KLGYYAQAVEFVMICGGKDKKLDEESFGILGSRLINLKRFEEAKL 301


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