BLASTX nr result

ID: Glycyrrhiza23_contig00017137 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00017137
         (442 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003620005.1| GRF zinc finger containing protein [Medicago...    45   1e-06
ref|XP_003599949.1| GRF zinc finger containing protein [Medicago...    45   1e-06
ref|XP_003612076.1| GRF zinc finger containing protein [Medicago...    43   2e-06
ref|XP_003593148.1| GRF zinc finger containing protein [Medicago...    43   2e-06
ref|XP_003630244.1| hypothetical protein MTR_8g093410 [Medicago ...    44   3e-06

>ref|XP_003620005.1| GRF zinc finger containing protein [Medicago truncatula]
           gi|355495020|gb|AES76223.1| GRF zinc finger containing
           protein [Medicago truncatula]
          Length = 115

 Score = 44.7 bits (104), Expect(2) = 1e-06
 Identities = 18/35 (51%), Positives = 24/35 (68%), Gaps = 4/35 (11%)
 Frame = -1

Query: 322 TPMRCYC----PLLTSWTKENPSHRFYGCGRFQVR 230
           T + CYC    PL+T+WT ENP  RF+GCG++  R
Sbjct: 20  TKLVCYCGVDSPLVTAWTDENPGRRFHGCGKYWQR 54



 Score = 32.3 bits (72), Expect(2) = 1e-06
 Identities = 16/36 (44%), Positives = 20/36 (55%)
 Frame = -2

Query: 108 RRGCSFFRWHDAEVNXXXXXXXXXXXKRIDAMKSRE 1
           RR CSFFRW D EV            K+ DA+K++E
Sbjct: 54  RRKCSFFRWFDPEVPQRQKKIIRGLLKKNDALKNKE 89


>ref|XP_003599949.1| GRF zinc finger containing protein [Medicago truncatula]
           gi|355488997|gb|AES70200.1| GRF zinc finger containing
           protein [Medicago truncatula]
          Length = 114

 Score = 44.7 bits (104), Expect(2) = 1e-06
 Identities = 18/35 (51%), Positives = 24/35 (68%), Gaps = 4/35 (11%)
 Frame = -1

Query: 322 TPMRCYC----PLLTSWTKENPSHRFYGCGRFQVR 230
           T + CYC    PL+T+WT ENP  RF+GCG++  R
Sbjct: 19  TKLVCYCGVESPLVTAWTDENPGRRFHGCGKYWQR 53



 Score = 32.3 bits (72), Expect(2) = 1e-06
 Identities = 16/36 (44%), Positives = 20/36 (55%)
 Frame = -2

Query: 108 RRGCSFFRWHDAEVNXXXXXXXXXXXKRIDAMKSRE 1
           RR CSFFRW D EV            K+ DA+K++E
Sbjct: 53  RRKCSFFRWFDPEVPDRQKKVIRGLLKKNDALKNKE 88


>ref|XP_003612076.1| GRF zinc finger containing protein [Medicago truncatula]
           gi|355513411|gb|AES95034.1| GRF zinc finger containing
           protein [Medicago truncatula]
          Length = 116

 Score = 43.1 bits (100), Expect(2) = 2e-06
 Identities = 16/28 (57%), Positives = 21/28 (75%), Gaps = 4/28 (14%)
 Frame = -1

Query: 310 CYC----PLLTSWTKENPSHRFYGCGRF 239
           CYC    PL+T+WT ENP  RF+GCG++
Sbjct: 23  CYCGVESPLVTAWTDENPGRRFHGCGKY 50



 Score = 33.5 bits (75), Expect(2) = 2e-06
 Identities = 20/48 (41%), Positives = 22/48 (45%)
 Frame = -2

Query: 144 CDGYFAPAQIDGRRGCSFFRWHDAEVNXXXXXXXXXXXKRIDAMKSRE 1
           C  YF       RR CSFFRW D EV            K+ DAMK +E
Sbjct: 47  CGKYFQ------RRKCSFFRWFDPEVPERQKKLIRGLLKKNDAMKKKE 88


>ref|XP_003593148.1| GRF zinc finger containing protein [Medicago truncatula]
           gi|355482196|gb|AES63399.1| GRF zinc finger containing
           protein [Medicago truncatula]
          Length = 116

 Score = 43.1 bits (100), Expect(2) = 2e-06
 Identities = 16/28 (57%), Positives = 21/28 (75%), Gaps = 4/28 (14%)
 Frame = -1

Query: 310 CYC----PLLTSWTKENPSHRFYGCGRF 239
           CYC    PL+T+WT ENP  RF+GCG++
Sbjct: 23  CYCGVESPLVTAWTDENPGRRFHGCGKY 50



 Score = 33.5 bits (75), Expect(2) = 2e-06
 Identities = 20/48 (41%), Positives = 22/48 (45%)
 Frame = -2

Query: 144 CDGYFAPAQIDGRRGCSFFRWHDAEVNXXXXXXXXXXXKRIDAMKSRE 1
           C  YF       RR CSFFRW D EV            K+ DAMK +E
Sbjct: 47  CGKYFQ------RRKCSFFRWFDPEVPERRKKLIRGLLKKNDAMKKKE 88


>ref|XP_003630244.1| hypothetical protein MTR_8g093410 [Medicago truncatula]
           gi|355524266|gb|AET04720.1| hypothetical protein
           MTR_8g093410 [Medicago truncatula]
          Length = 109

 Score = 43.5 bits (101), Expect(2) = 3e-06
 Identities = 17/31 (54%), Positives = 22/31 (70%), Gaps = 4/31 (12%)
 Frame = -1

Query: 310 CYC----PLLTSWTKENPSHRFYGCGRFQVR 230
           CYC    PL+T+WT ENP  RF+GCG++  R
Sbjct: 18  CYCGVESPLVTAWTDENPGRRFHGCGKYWQR 48



 Score = 32.3 bits (72), Expect(2) = 3e-06
 Identities = 16/36 (44%), Positives = 20/36 (55%)
 Frame = -2

Query: 108 RRGCSFFRWHDAEVNXXXXXXXXXXXKRIDAMKSRE 1
           RR CSFFRW D EV            K+ DA+K++E
Sbjct: 48  RRKCSFFRWFDPEVPDRQKKVIKGLLKKNDALKNKE 83


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