BLASTX nr result

ID: Glycyrrhiza23_contig00017129 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00017129
         (479 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003552539.1| PREDICTED: KH domain-containing protein At4g...    75   5e-12
ref|XP_003534436.1| PREDICTED: KH domain-containing protein At4g...    75   5e-12
ref|XP_003554535.1| PREDICTED: KH domain-containing protein At4g...    72   5e-11
ref|XP_002283766.1| PREDICTED: KH domain-containing protein At4g...    72   6e-11
ref|XP_003621262.1| KH domain-containing protein [Medicago trunc...    72   6e-11

>ref|XP_003552539.1| PREDICTED: KH domain-containing protein At4g18375-like [Glycine
           max]
          Length = 543

 Score = 75.1 bits (183), Expect = 5e-12
 Identities = 44/79 (55%), Positives = 48/79 (60%)
 Frame = -1

Query: 239 DAHVKVHQRVITEDLXXXXXXXXXXXXXXXXXXGNQVTTRLLVPSDQIGCVIAKGG*IVQ 60
           DA  +VHQRVI ED                    N VT +LLVPSDQIGCVI KGG IVQ
Sbjct: 115 DALFRVHQRVIAEDAREDEDDER-----------NHVTAKLLVPSDQIGCVIGKGGQIVQ 163

Query: 59  SFRIEIGAQIWILKDERLP 3
           + R E GAQI ILKD+RLP
Sbjct: 164 NIRSETGAQIRILKDDRLP 182


>ref|XP_003534436.1| PREDICTED: KH domain-containing protein At4g18375-like [Glycine
           max]
          Length = 540

 Score = 75.1 bits (183), Expect = 5e-12
 Identities = 44/79 (55%), Positives = 48/79 (60%)
 Frame = -1

Query: 239 DAHVKVHQRVITEDLXXXXXXXXXXXXXXXXXXGNQVTTRLLVPSDQIGCVIAKGG*IVQ 60
           DA  +VHQRVI ED                    N VT +LLVPSDQIGCVI KGG IVQ
Sbjct: 115 DALFRVHQRVIAEDAREDEDEER-----------NHVTAKLLVPSDQIGCVIGKGGQIVQ 163

Query: 59  SFRIEIGAQIWILKDERLP 3
           + R E GAQI ILKD+RLP
Sbjct: 164 NIRSETGAQIRILKDDRLP 182


>ref|XP_003554535.1| PREDICTED: KH domain-containing protein At4g18375-like [Glycine
           max]
          Length = 548

 Score = 72.0 bits (175), Expect = 5e-11
 Identities = 42/79 (53%), Positives = 46/79 (58%)
 Frame = -1

Query: 239 DAHVKVHQRVITEDLXXXXXXXXXXXXXXXXXXGNQVTTRLLVPSDQIGCVIAKGG*IVQ 60
           DA  KVH RV+ ED                     QVT +LLVPSDQIGCVI KGG IVQ
Sbjct: 113 DALFKVHDRVVAEDFHGDQDDDGG----------QQVTAKLLVPSDQIGCVIGKGGSIVQ 162

Query: 59  SFRIEIGAQIWILKDERLP 3
           + R E GAQI ILKD+ LP
Sbjct: 163 NIRSETGAQIRILKDDHLP 181


>ref|XP_002283766.1| PREDICTED: KH domain-containing protein At4g18375 [Vitis vinifera]
           gi|296082939|emb|CBI22240.3| unnamed protein product
           [Vitis vinifera]
          Length = 548

 Score = 71.6 bits (174), Expect = 6e-11
 Identities = 40/79 (50%), Positives = 49/79 (62%)
 Frame = -1

Query: 239 DAHVKVHQRVITEDLXXXXXXXXXXXXXXXXXXGNQVTTRLLVPSDQIGCVIAKGG*IVQ 60
           DA  +VH RV++E++                   +QVT RLLVPSDQIGCVI KGG I+Q
Sbjct: 114 DALFRVHDRVVSEEVHGEDSEEA-----------SQVTVRLLVPSDQIGCVIGKGGQIIQ 162

Query: 59  SFRIEIGAQIWILKDERLP 3
           S R E GAQ+ ILKD+ LP
Sbjct: 163 SIRSESGAQVRILKDDHLP 181


>ref|XP_003621262.1| KH domain-containing protein [Medicago truncatula]
           gi|355496277|gb|AES77480.1| KH domain-containing protein
           [Medicago truncatula]
          Length = 571

 Score = 71.6 bits (174), Expect = 6e-11
 Identities = 42/79 (53%), Positives = 49/79 (62%)
 Frame = -1

Query: 239 DAHVKVHQRVITEDLXXXXXXXXXXXXXXXXXXGNQVTTRLLVPSDQIGCVIAKGG*IVQ 60
           DA V++HQ+VI EDL                   + VT +LLV SDQIGCVI KGG IVQ
Sbjct: 120 DALVRIHQKVIAEDLRGVEDEDVDMEKVDGG---DLVTAKLLVASDQIGCVIGKGGQIVQ 176

Query: 59  SFRIEIGAQIWILKDERLP 3
           + R E GAQI ILKD+RLP
Sbjct: 177 NIRSETGAQIRILKDDRLP 195


Top