BLASTX nr result

ID: Glycyrrhiza23_contig00017063 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00017063
         (336 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003540926.1| PREDICTED: pollen-specific leucine-rich repe...    96   4e-18
ref|XP_003526272.1| PREDICTED: pollen-specific leucine-rich repe...    92   6e-17
gb|AFK41054.1| unknown [Medicago truncatula]                           86   2e-15
ref|XP_002517887.1| serine-threonine protein kinase, plant-type,...    72   5e-11
ref|XP_002310403.1| predicted protein [Populus trichocarpa] gi|2...    65   7e-09

>ref|XP_003540926.1| PREDICTED: pollen-specific leucine-rich repeat extensin-like
           protein 3-like [Glycine max]
          Length = 417

 Score = 95.5 bits (236), Expect = 4e-18
 Identities = 46/71 (64%), Positives = 48/71 (67%)
 Frame = -1

Query: 336 VFDDRRNCLPEKPLQRSEKECSDKLEHPVDCFELCCPXXXXXXXXXXXXXXVAIPPAAMP 157
           VFDDRRNCLPEKPLQRSEKEC  KLEHPVDC ELCC                A  PAAMP
Sbjct: 347 VFDDRRNCLPEKPLQRSEKECKAKLEHPVDCSELCCVVGSNVSAGSVAVPPAAAVPAAMP 406

Query: 156 VYAPLVEPSYP 124
           V APL+ PS+P
Sbjct: 407 VSAPLLAPSHP 417


>ref|XP_003526272.1| PREDICTED: pollen-specific leucine-rich repeat extensin-like
           protein 3-like [Glycine max]
          Length = 419

 Score = 91.7 bits (226), Expect = 6e-17
 Identities = 48/73 (65%), Positives = 51/73 (69%), Gaps = 2/73 (2%)
 Frame = -1

Query: 336 VFDDRRNCLPEKPLQRSEKECSDKLEHPVDCFELCCPXXXXXXXXXXXXXXVAIPP--AA 163
           VFDDRRNCLPEKPLQRSEKEC  KLEHPVDC ELCC               VA+PP  AA
Sbjct: 348 VFDDRRNCLPEKPLQRSEKECKAKLEHPVDCSELCC-VVGSNNNNVSAAGSVAVPPAAAA 406

Query: 162 MPVYAPLVEPSYP 124
           MPV APL+ PS+P
Sbjct: 407 MPVSAPLLAPSHP 419


>gb|AFK41054.1| unknown [Medicago truncatula]
          Length = 116

 Score = 86.3 bits (212), Expect = 2e-15
 Identities = 48/76 (63%), Positives = 51/76 (67%), Gaps = 6/76 (7%)
 Frame = -1

Query: 333 FDDRRNCLPEKPLQRSEKECSDKLEHPVDCFELCCPXXXXXXXXXXXXXXVAIPP----- 169
           FDDRRNCLPEK LQRSEKECS KLEHPVDCFELCC               +AIPP     
Sbjct: 43  FDDRRNCLPEKALQRSEKECSAKLEHPVDCFELCC--VEGGLGNNVSAGFMAIPPSATAS 100

Query: 168 AAMPV-YAPLVEPSYP 124
           AAMP+  APLV PS+P
Sbjct: 101 AAMPLSAAPLVAPSHP 116


>ref|XP_002517887.1| serine-threonine protein kinase, plant-type, putative [Ricinus
           communis] gi|223542869|gb|EEF44405.1| serine-threonine
           protein kinase, plant-type, putative [Ricinus communis]
          Length = 417

 Score = 72.0 bits (175), Expect = 5e-11
 Identities = 37/70 (52%), Positives = 41/70 (58%), Gaps = 2/70 (2%)
 Frame = -1

Query: 333 FDDRRNCLPEKPLQRSEKECSDKLEHPVDCFELCC--PXXXXXXXXXXXXXXVAIPPAAM 160
           FDDRRNCLPEKPLQRS+KEC   LEHPVDC+E  C                  AI PAA 
Sbjct: 346 FDDRRNCLPEKPLQRSKKECDPVLEHPVDCYEQRCVAGSRSGGMFGGSAPFGPAIVPAAS 405

Query: 159 PVYAPLVEPS 130
           P+  P + PS
Sbjct: 406 PLMPPSIAPS 415


>ref|XP_002310403.1| predicted protein [Populus trichocarpa] gi|222853306|gb|EEE90853.1|
           predicted protein [Populus trichocarpa]
          Length = 328

 Score = 64.7 bits (156), Expect = 7e-09
 Identities = 26/30 (86%), Positives = 29/30 (96%)
 Frame = -1

Query: 333 FDDRRNCLPEKPLQRSEKECSDKLEHPVDC 244
           +DDRRNCLPEKPLQRS+KEC+D LEHPVDC
Sbjct: 299 YDDRRNCLPEKPLQRSQKECNDTLEHPVDC 328


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