BLASTX nr result

ID: Glycyrrhiza23_contig00017045 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00017045
         (302 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003630151.1| Ubiquitin carboxyl-terminal hydrolase [Medic...   173   1e-41
ref|XP_003524288.1| PREDICTED: ubiquitin carboxyl-terminal hydro...   173   1e-41
ref|XP_003532855.1| PREDICTED: ubiquitin carboxyl-terminal hydro...   170   1e-40
ref|XP_002275476.2| PREDICTED: ubiquitin carboxyl-terminal hydro...   126   2e-27
emb|CBI21539.3| unnamed protein product [Vitis vinifera]              126   2e-27

>ref|XP_003630151.1| Ubiquitin carboxyl-terminal hydrolase [Medicago truncatula]
           gi|355524173|gb|AET04627.1| Ubiquitin carboxyl-terminal
           hydrolase [Medicago truncatula]
          Length = 370

 Score =  173 bits (439), Expect = 1e-41
 Identities = 82/100 (82%), Positives = 88/100 (88%)
 Frame = -3

Query: 300 LSLMEGNKVELEKLGRCSDQELCDCRKIYNLEKLPWSNRFSHTLKQLSIARCPKILCVQL 121
           LSLMEG+KVEL  LGRCSDQE CDC+K YNLE LPWSNRFSH LKQLSIARCP+ILC+QL
Sbjct: 79  LSLMEGDKVELGNLGRCSDQEFCDCQKTYNLENLPWSNRFSHALKQLSIARCPRILCIQL 138

Query: 120 KRVHMNGIGEPVKLQGHISFPLILDVLSFMTTRMGVKTRE 1
           KRVHMN  GE  KLQGHISFPLILDV SFMTTR+GVK +E
Sbjct: 139 KRVHMNDFGESFKLQGHISFPLILDVSSFMTTRLGVKIQE 178


>ref|XP_003524288.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 27-like [Glycine
           max]
          Length = 549

 Score =  173 bits (438), Expect = 1e-41
 Identities = 80/100 (80%), Positives = 94/100 (94%)
 Frame = -3

Query: 300 LSLMEGNKVELEKLGRCSDQELCDCRKIYNLEKLPWSNRFSHTLKQLSIARCPKILCVQL 121
           LS+MEGN+VEL+ + RCSD E+C+CRK+YNL+KLPWSNRFSHTLKQLSIARCP+ILC+QL
Sbjct: 271 LSIMEGNEVELKMIRRCSDPEICNCRKMYNLDKLPWSNRFSHTLKQLSIARCPRILCIQL 330

Query: 120 KRVHMNGIGEPVKLQGHISFPLILDVLSFMTTRMGVKTRE 1
           KRV+MN  GE VKLQGHISFPLILDVLSFMTTR+GVKT++
Sbjct: 331 KRVYMNVFGELVKLQGHISFPLILDVLSFMTTRLGVKTQD 370


>ref|XP_003532855.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 27-like [Glycine
           max]
          Length = 563

 Score =  170 bits (431), Expect = 1e-40
 Identities = 82/103 (79%), Positives = 93/103 (90%), Gaps = 3/103 (2%)
 Frame = -3

Query: 300 LSLMEGNKV---ELEKLGRCSDQELCDCRKIYNLEKLPWSNRFSHTLKQLSIARCPKILC 130
           LS+MEGN+V   ELEKL RCSD E+CDCRK+YNL+KLPWSNRFSHTLKQLS+ARCP+ILC
Sbjct: 282 LSIMEGNEVIPVELEKLRRCSDPEICDCRKMYNLDKLPWSNRFSHTLKQLSMARCPRILC 341

Query: 129 VQLKRVHMNGIGEPVKLQGHISFPLILDVLSFMTTRMGVKTRE 1
           +QLKRV+MN  GE VKLQGHISFPLILDVLSFMTTR+GVK  +
Sbjct: 342 IQLKRVYMNVFGELVKLQGHISFPLILDVLSFMTTRLGVKKHD 384


>ref|XP_002275476.2| PREDICTED: ubiquitin carboxyl-terminal hydrolase 27-like [Vitis
           vinifera]
          Length = 641

 Score =  126 bits (316), Expect = 2e-27
 Identities = 59/100 (59%), Positives = 73/100 (73%)
 Frame = -3

Query: 300 LSLMEGNKVELEKLGRCSDQELCDCRKIYNLEKLPWSNRFSHTLKQLSIARCPKILCVQL 121
           LSL  GN+ E++KL  C +Q  CDCR + NLE +PWSN FS TLKQLSI RCPKILC+ L
Sbjct: 308 LSLRSGNEAEIQKLRCCREQGSCDCRNLLNLEAVPWSNSFSRTLKQLSIVRCPKILCIHL 367

Query: 120 KRVHMNGIGEPVKLQGHISFPLILDVLSFMTTRMGVKTRE 1
           +R  M   GE  K+QGHISFPLIL++L FM + +G+K  E
Sbjct: 368 QRASMTIFGELTKVQGHISFPLILNLLPFMKSEVGIKNWE 407


>emb|CBI21539.3| unnamed protein product [Vitis vinifera]
          Length = 532

 Score =  126 bits (316), Expect = 2e-27
 Identities = 59/100 (59%), Positives = 73/100 (73%)
 Frame = -3

Query: 300 LSLMEGNKVELEKLGRCSDQELCDCRKIYNLEKLPWSNRFSHTLKQLSIARCPKILCVQL 121
           LSL  GN+ E++KL  C +Q  CDCR + NLE +PWSN FS TLKQLSI RCPKILC+ L
Sbjct: 253 LSLRSGNEAEIQKLRCCREQGSCDCRNLLNLEAVPWSNSFSRTLKQLSIVRCPKILCIHL 312

Query: 120 KRVHMNGIGEPVKLQGHISFPLILDVLSFMTTRMGVKTRE 1
           +R  M   GE  K+QGHISFPLIL++L FM + +G+K  E
Sbjct: 313 QRASMTIFGELTKVQGHISFPLILNLLPFMKSEVGIKNWE 352


Top