BLASTX nr result

ID: Glycyrrhiza23_contig00016990 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00016990
         (316 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003628454.1| hypothetical protein MTR_8g058400, partial [...   119   3e-25
ref|XP_003525968.1| PREDICTED: putative pentatricopeptide repeat...    91   8e-17
emb|CAN64120.1| hypothetical protein VITISV_037241 [Vitis vinifera]    74   1e-11
ref|XP_002283237.1| PREDICTED: putative pentatricopeptide repeat...    69   4e-10
ref|XP_002891745.1| pentatricopeptide repeat-containing protein ...    61   1e-07

>ref|XP_003628454.1| hypothetical protein MTR_8g058400, partial [Medicago truncatula]
           gi|355522476|gb|AET02930.1| hypothetical protein
           MTR_8g058400, partial [Medicago truncatula]
          Length = 303

 Score =  119 bits (298), Expect = 3e-25
 Identities = 59/105 (56%), Positives = 68/105 (64%)
 Frame = -2

Query: 315 IPEMEQVLHMLRNDTRHAVPEPLLCHVISFYXXXXXXXXXXXTFLSIPSFRCTPTXXXXX 136
           IP+ME +L  L NDTRH VPEPLLCHVISFY           TFLSIPSFRCTPT     
Sbjct: 56  IPQMELILQQLHNDTRHRVPEPLLCHVISFYARARLPSRAVQTFLSIPSFRCTPTLKSFN 115

Query: 135 XXXXXXLTCREFHSLAQFAARAGQFAVPPNACSYNILIRACFLRG 1
                 LTCR F ++  FA+R  +F  PPN C+YNILIR+CF +G
Sbjct: 116 SLLNALLTCRRFQTITHFASRLSEFG-PPNTCTYNILIRSCFFQG 159


>ref|XP_003525968.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g53330-like [Glycine max]
          Length = 465

 Score = 91.3 bits (225), Expect = 8e-17
 Identities = 52/103 (50%), Positives = 60/103 (58%), Gaps = 1/103 (0%)
 Frame = -2

Query: 312 PEMEQVLHMLRNDTRHAVPEPLLCHVISFYXXXXXXXXXXXTFLSIPSFRCTPTXXXXXX 133
           P+MEQ+LH L+  T+  VPEPLLC VI  Y           TFLSIPSFRCTPT      
Sbjct: 64  PQMEQILHQLQTLTQFPVPEPLLCRVIISYARARLPSRALRTFLSIPSFRCTPTLKSFNS 123

Query: 132 XXXXXLTCREFHSLAQFAARAGQF-AVPPNACSYNILIRACFL 7
                L CR+F SL +   R   F A  P+AC+YNILIRAC L
Sbjct: 124 LLHALLLCRDFPSLPRLLPRLRHFSASGPDACTYNILIRACSL 166


>emb|CAN64120.1| hypothetical protein VITISV_037241 [Vitis vinifera]
          Length = 418

 Score = 73.9 bits (180), Expect = 1e-11
 Identities = 43/103 (41%), Positives = 52/103 (50%)
 Frame = -2

Query: 309 EMEQVLHMLRNDTRHAVPEPLLCHVISFYXXXXXXXXXXXTFLSIPSFRCTPTXXXXXXX 130
           EMEQ+L  LR +TR +  E + C+VISFY           TF SIP FRC  T       
Sbjct: 61  EMEQILSQLRRETRFSPKEIIFCNVISFYGRARLPDRAIQTFESIPEFRCQRTVKSLNSL 120

Query: 129 XXXXLTCREFHSLAQFAARAGQFAVPPNACSYNILIRACFLRG 1
               L C+EF       +   +FA  PN C+YNILI AC L G
Sbjct: 121 LNALLNCKEFEKFDGILSGIDKFAT-PNVCTYNILINACCLSG 162


>ref|XP_002283237.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g53330-like [Vitis vinifera]
          Length = 464

 Score = 68.9 bits (167), Expect = 4e-10
 Identities = 40/103 (38%), Positives = 51/103 (49%)
 Frame = -2

Query: 309 EMEQVLHMLRNDTRHAVPEPLLCHVISFYXXXXXXXXXXXTFLSIPSFRCTPTXXXXXXX 130
           EMEQ+L  LR +TR +  E + C+VISFY           TF SIP FRC  T       
Sbjct: 61  EMEQILSQLRRETRFSPKEIIFCNVISFYGRARLPDRAIQTFESIPEFRCQRTVKSLNSL 120

Query: 129 XXXXLTCREFHSLAQFAARAGQFAVPPNACSYNILIRACFLRG 1
               L C+EF       +   +FA  P+ C+YN+LI AC   G
Sbjct: 121 LNALLKCKEFEKFDGILSGIDKFAT-PDVCTYNVLINACCSSG 162


>ref|XP_002891745.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata] gi|297337587|gb|EFH68004.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 472

 Score = 60.8 bits (146), Expect = 1e-07
 Identities = 35/103 (33%), Positives = 49/103 (47%)
 Frame = -2

Query: 309 EMEQVLHMLRNDTRHAVPEPLLCHVISFYXXXXXXXXXXXTFLSIPSFRCTPTXXXXXXX 130
           E++QVL  L+ DTR    E L C+VI+F+            F  +P +RC  T       
Sbjct: 65  ELDQVLLQLKTDTRIVPTEILFCNVINFFGRGRLPSRALHMFDEMPQYRCQRTVKSLNSL 124

Query: 129 XXXXLTCREFHSLAQFAARAGQFAVPPNACSYNILIRACFLRG 1
               L C EF  + +  +   +F   P+AC+YNILI  C  RG
Sbjct: 125 LNTLLKCGEFEKMKERLSSIDEFG-KPDACTYNILIHGCSQRG 166


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