BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00016964
         (1008 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003551792.1| PREDICTED: DNA-directed RNA polymerase III s...   419   e-115
gb|AFK40562.1| unknown [Lotus japonicus]                              319   8e-85
emb|CBI33284.3| unnamed protein product [Vitis vinifera]              303   3e-80
ref|XP_002509507.1| DNA-directed RNA polymerase III subunit F, p...   301   2e-79
ref|XP_003635403.1| PREDICTED: DNA-directed RNA polymerase III s...   299   6e-79

>ref|XP_003551792.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC6-like
           [Glycine max]
          Length = 239

 Score =  419 bits (1076), Expect = e-115
 Identities = 200/239 (83%), Positives = 216/239 (90%)
 Frame = +1

Query: 37  MSRVQGSSSLKRKRQELALVSESLTDGERILYNLIHSKKDMGIWTGDMKRETNLPDXXXX 216
           MS +QGSSSLKRKRQ+LALV+ SLTDGER+LYNLIHSKKDMGIWTGDMKRETNLPD    
Sbjct: 1   MSHLQGSSSLKRKRQDLALVTGSLTDGERVLYNLIHSKKDMGIWTGDMKRETNLPDSIVK 60

Query: 217 XXXXXXXXXXXIKEVVNIQNKGRKHYMAAEFEPSKEITGGDWYSEGSLDTEFINLVKDVC 396
                      IKEVVNIQNKGRKHYMAAEFEPSKEITGG WY++G LDT+FINLVKDVC
Sbjct: 61  KSLKLLQSKNLIKEVVNIQNKGRKHYMAAEFEPSKEITGGVWYNQGRLDTDFINLVKDVC 120

Query: 397 LKYIFRQKVTTRDGVLEWSRKSGVFSAEVTTQQIEEILRTLVLDDEIIEVKSTGFGDFAS 576
           LKYIFRQKV TRDGV+EWSRKSGVF+ EVTTQQI+EILRTLVLDDEI+EVKSTGFGDF+S
Sbjct: 121 LKYIFRQKVATRDGVMEWSRKSGVFNVEVTTQQIDEILRTLVLDDEIVEVKSTGFGDFSS 180

Query: 577 VPVGRVCYKCKSKGGVRGEQKPGAMASIPCGVCPRLNYCTPDGIISPRTCDYYQKWLDF 753
           VPVGR+CY+CKSKGG RGEQKPGAMASIPCGVCPR+N+CTPDGIISPRTC YYQKWLDF
Sbjct: 181 VPVGRICYRCKSKGGNRGEQKPGAMASIPCGVCPRINFCTPDGIISPRTCVYYQKWLDF 239


>gb|AFK40562.1| unknown [Lotus japonicus]
          Length = 232

 Score =  319 bits (817), Expect = 8e-85
 Identities = 156/241 (64%), Positives = 187/241 (77%), Gaps = 2/241 (0%)
 Frame = +1

Query: 37  MSRVQGSSSLKRKRQELALVSESLTDGERILYNLIHSKKDMGIWTGDMKRETNLPDXXXX 216
           MSR+ GSSSLKRKR +L       TDGE ++Y LIHSK++MGIW  D+KRET +PD    
Sbjct: 1   MSRLPGSSSLKRKRPDL-------TDGEDVVYKLIHSKENMGIWIADIKRETKMPDNMVK 53

Query: 217 XXXXXXXXXXXIKEVVNIQNKGRKHYMAAEFEPSKEITGGDWYSEGSLDTEFINLVKDVC 396
                      +KEVVNIQ++G+K YMA +FEPSKE+TGGDWY++G  DT+FIN  KDV 
Sbjct: 54  KCIKSLQDKNLVKEVVNIQSRGKKRYMAVDFEPSKELTGGDWYTDGKFDTDFINAAKDVF 113

Query: 397 LKYIFRQKVTTRDGVLEWSRKSGVFSAEVTTQQIEEILRTLVLDDEIIEVKSTGFGDFAS 576
           LKY+F+QKV T DGVLEW+RK+ VFS +VT QQ+EEILR LVLDDEIIEV+STG  +FAS
Sbjct: 114 LKYVFKQKVATCDGVLEWTRKNAVFSVDVTAQQVEEILRALVLDDEIIEVESTGKEEFAS 173

Query: 577 VPVGRVCYKCKSKGGVRGEQKPGAMASIPCGVCPRLNYCTP--DGIISPRTCDYYQKWLD 750
           VP G++CY  KSKGGVRGE+K GAMASIPCGVCPR+  C P  DG ISPRTCDY++KWLD
Sbjct: 174 VPKGKICY--KSKGGVRGEKKAGAMASIPCGVCPRIIKCAPDADGFISPRTCDYFEKWLD 231

Query: 751 F 753
           F
Sbjct: 232 F 232


>emb|CBI33284.3| unnamed protein product [Vitis vinifera]
          Length = 300

 Score =  303 bits (777), Expect = 3e-80
 Identities = 149/248 (60%), Positives = 184/248 (74%), Gaps = 1/248 (0%)
 Frame = +1

Query: 13  PVAILAPGMSRVQGSSSLKRKRQELALVSESLTDGERILYNLIHSKKDMGIWTGDMKRET 192
           P   L+ GMSR QGSS LKRKR +    S+ L D ER+LY+LI SK+DMGIWT DMKRET
Sbjct: 54  PPLFLSEGMSRSQGSS-LKRKRPDTNTASQPLLDAERVLYDLIRSKEDMGIWTRDMKRET 112

Query: 193 NLPDXXXXXXXXXXXXXXXIKEVVNIQNKGRKHYMAAEFEPSKEITGGDWYSEGSLDTEF 372
           NLPD               IKEVVNIQ+KGRKHYMA EFEPSKE+TGG WY EG+LDTE+
Sbjct: 113 NLPDNVVTKSLKALQVKKLIKEVVNIQSKGRKHYMAVEFEPSKELTGGAWYVEGNLDTEY 172

Query: 373 INLVKDVCLKYIFRQKVTTRDGVLEWSRKSGVFSAEVTTQQIEEILRTLVLDDEIIEVKS 552
           I ++K  C++ + + KV T +G+ E   K+G+ + E +TQQI EILR LVLD+EI+EV+S
Sbjct: 173 IKILKKTCVRVLSKLKVATAEGISESINKTGLCATECSTQQIAEILRALVLDNEIMEVRS 232

Query: 553 TGFGDFASVPVGRVCYKCKSKGGVRGEQKP-GAMASIPCGVCPRLNYCTPDGIISPRTCD 729
           +G G+F+S+P+G VCY+C +KGG+ G     GAMASIPCGVCPR+  CTPDGIISP+TC 
Sbjct: 233 SGSGEFSSIPIGAVCYRCTNKGGLGGGGPTIGAMASIPCGVCPRITQCTPDGIISPKTCA 292

Query: 730 YYQKWLDF 753
           YY KWLDF
Sbjct: 293 YYTKWLDF 300


>ref|XP_002509507.1| DNA-directed RNA polymerase III subunit F, putative [Ricinus
           communis] gi|223549406|gb|EEF50894.1| DNA-directed RNA
           polymerase III subunit F, putative [Ricinus communis]
          Length = 236

 Score =  301 bits (771), Expect = 2e-79
 Identities = 143/233 (61%), Positives = 177/233 (75%)
 Frame = +1

Query: 55  SSSLKRKRQELALVSESLTDGERILYNLIHSKKDMGIWTGDMKRETNLPDXXXXXXXXXX 234
           S +LKRK+ E +  ++SLT+ E  LYN+I SK+DMGIWT DMKRETNLPD          
Sbjct: 4   SQALKRKQPESSSPAQSLTEHECTLYNVIWSKQDMGIWTRDMKRETNLPDNVVNKSLKVL 63

Query: 235 XXXXXIKEVVNIQNKGRKHYMAAEFEPSKEITGGDWYSEGSLDTEFINLVKDVCLKYIFR 414
                IKEVVNIQNKGRKHYMA EFEPSKEITGG WY EG+LDTEFI L+K+VC K + +
Sbjct: 64  QAKNLIKEVVNIQNKGRKHYMATEFEPSKEITGGAWYVEGNLDTEFIKLLKEVCTKQVLK 123

Query: 415 QKVTTRDGVLEWSRKSGVFSAEVTTQQIEEILRTLVLDDEIIEVKSTGFGDFASVPVGRV 594
            KV T +G+ +  ++SG+F+ E+T QQIEEI++ LVLD+ +IEVKS G  +F+ +P+G+V
Sbjct: 124 LKVATLEGITDSIKRSGIFNTELTKQQIEEIVKALVLDNALIEVKSNGMLEFSFIPIGKV 183

Query: 595 CYKCKSKGGVRGEQKPGAMASIPCGVCPRLNYCTPDGIISPRTCDYYQKWLDF 753
           CYKC  KG   GE + GAMASIPCGVCPR++ CTPDGIISP+TC YY KWLDF
Sbjct: 184 CYKCVGKGSTAGEPRIGAMASIPCGVCPRISQCTPDGIISPQTCVYYSKWLDF 236


>ref|XP_003635403.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC6-like [Vitis
           vinifera]
          Length = 239

 Score =  299 bits (766), Expect = 6e-79
 Identities = 146/240 (60%), Positives = 181/240 (75%), Gaps = 1/240 (0%)
 Frame = +1

Query: 37  MSRVQGSSSLKRKRQELALVSESLTDGERILYNLIHSKKDMGIWTGDMKRETNLPDXXXX 216
           MSR QGSS LKRKR +    S+ L D ER+LY+LI SK+DMGIWT DMKRETNLPD    
Sbjct: 1   MSRSQGSS-LKRKRPDTNTASQPLLDAERVLYDLIRSKEDMGIWTRDMKRETNLPDNVVT 59

Query: 217 XXXXXXXXXXXIKEVVNIQNKGRKHYMAAEFEPSKEITGGDWYSEGSLDTEFINLVKDVC 396
                      IKEVVNIQ+KGRKHYMA EFEPSKE+TGG WY EG+LDTE+I ++K+ C
Sbjct: 60  KSLKALQVKKLIKEVVNIQSKGRKHYMAVEFEPSKELTGGAWYVEGNLDTEYIKILKETC 119

Query: 397 LKYIFRQKVTTRDGVLEWSRKSGVFSAEVTTQQIEEILRTLVLDDEIIEVKSTGFGDFAS 576
           ++ + + KV T +G+ E   K+G+ + E +TQQI EILR LVLD+EI+EV+S+G G+F+S
Sbjct: 120 VRVLSKLKVATAEGISESINKTGLCATECSTQQIAEILRALVLDNEIMEVRSSGSGEFSS 179

Query: 577 VPVGRVCYKCKSKGGVRGEQKP-GAMASIPCGVCPRLNYCTPDGIISPRTCDYYQKWLDF 753
           +P+G VCY+C +KGG+ G     GAMASIPCGVCPR+  CTPDGIISP+TC YY KWLDF
Sbjct: 180 IPIGAVCYRCTNKGGLGGGGPTIGAMASIPCGVCPRITQCTPDGIISPKTCAYYTKWLDF 239