BLASTX nr result

ID: Glycyrrhiza23_contig00016915 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00016915
         (766 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001241417.1| uncharacterized protein LOC100803031 [Glycin...   234   1e-59
ref|NP_001236730.1| uncharacterized protein LOC100500095 [Glycin...   234   2e-59
ref|XP_003552010.1| PREDICTED: mediator of RNA polymerase II tra...   229   6e-58
gb|AFK42853.1| unknown [Medicago truncatula]                          227   2e-57
ref|XP_003614099.1| Mediator of RNA polymerase II transcription ...   227   2e-57

>ref|NP_001241417.1| uncharacterized protein LOC100803031 [Glycine max]
           gi|255638120|gb|ACU19374.1| unknown [Glycine max]
          Length = 217

 Score =  234 bits (598), Expect = 1e-59
 Identities = 121/134 (90%), Positives = 125/134 (93%)
 Frame = -1

Query: 766 VLVRTMVESKASKNVLRMFYTLGYKLDHELLRVGFSFQFYRGAQITVTVSSINKMLKLHA 587
           VLVR+MVESK SKN LRMFYTLGYKLDHELLRVGFSF F+RGAQITVTVSSINKMLKLHA
Sbjct: 84  VLVRSMVESKTSKNALRMFYTLGYKLDHELLRVGFSFNFHRGAQITVTVSSINKMLKLHA 143

Query: 586 TDEAVPVTPGIQMVEVTAPASAETYTEVASAVSSFCEYLAPLLHLSKPGISTGVVPTXXX 407
           TDEAVPVTPGIQMVEVTAPA+AETYTEVA+AVSSFCEYLAPLLHLSKPGISTGVVPT   
Sbjct: 144 TDEAVPVTPGIQMVEVTAPATAETYTEVAAAVSSFCEYLAPLLHLSKPGISTGVVPTAAA 203

Query: 406 XXASLMSDGGGTTL 365
             ASLMSDGG TTL
Sbjct: 204 AAASLMSDGGSTTL 217


>ref|NP_001236730.1| uncharacterized protein LOC100500095 [Glycine max]
           gi|255629097|gb|ACU14893.1| unknown [Glycine max]
          Length = 217

 Score =  234 bits (597), Expect = 2e-59
 Identities = 121/134 (90%), Positives = 124/134 (92%)
 Frame = -1

Query: 766 VLVRTMVESKASKNVLRMFYTLGYKLDHELLRVGFSFQFYRGAQITVTVSSINKMLKLHA 587
           VLVR+MVESK SKN LRMFYTLGYKLDHELLRVGFSF F+RGAQITVTVSSINKMLKLHA
Sbjct: 84  VLVRSMVESKTSKNALRMFYTLGYKLDHELLRVGFSFNFHRGAQITVTVSSINKMLKLHA 143

Query: 586 TDEAVPVTPGIQMVEVTAPASAETYTEVASAVSSFCEYLAPLLHLSKPGISTGVVPTXXX 407
           TDEAVPVTPGIQMVEVTAPA+AETY EVASAVSSFCEYLAPLLHLSKPGISTGVVPT   
Sbjct: 144 TDEAVPVTPGIQMVEVTAPATAETYAEVASAVSSFCEYLAPLLHLSKPGISTGVVPTAAA 203

Query: 406 XXASLMSDGGGTTL 365
             ASLMSDGGGT L
Sbjct: 204 AAASLMSDGGGTNL 217


>ref|XP_003552010.1| PREDICTED: mediator of RNA polymerase II transcription subunit
           18-like [Glycine max]
          Length = 214

 Score =  229 bits (583), Expect = 6e-58
 Identities = 120/134 (89%), Positives = 124/134 (92%)
 Frame = -1

Query: 766 VLVRTMVESKASKNVLRMFYTLGYKLDHELLRVGFSFQFYRGAQITVTVSSINKMLKLHA 587
           VLVR+MVESK SKN LRMFYTLGYKLDHELLRVGFSF F+RGAQITVTVSSINKMLKLHA
Sbjct: 84  VLVRSMVESKTSKNALRMFYTLGYKLDHELLRVGFSFNFHRGAQITVTVSSINKMLKLHA 143

Query: 586 TDEAVPVTPGIQMVEVTAPASAETYTEVASAVSSFCEYLAPLLHLSKPGISTGVVPTXXX 407
           TDEA+PVTPGIQMVEVTAPA+AETY EVASAVSSFCEYLAPLLHLSKPGISTGVVP    
Sbjct: 144 TDEAMPVTPGIQMVEVTAPATAETYAEVASAVSSFCEYLAPLLHLSKPGISTGVVPA--- 200

Query: 406 XXASLMSDGGGTTL 365
             ASLMSDGGGTTL
Sbjct: 201 AAASLMSDGGGTTL 214


>gb|AFK42853.1| unknown [Medicago truncatula]
          Length = 217

 Score =  227 bits (578), Expect = 2e-57
 Identities = 117/134 (87%), Positives = 121/134 (90%)
 Frame = -1

Query: 766 VLVRTMVESKASKNVLRMFYTLGYKLDHELLRVGFSFQFYRGAQITVTVSSINKMLKLHA 587
           VLVRTMVESK SKNVLRMFYTLGYKLDHELLRVGFSF+F RGAQITV VSS+NKMLKLHA
Sbjct: 84  VLVRTMVESKVSKNVLRMFYTLGYKLDHELLRVGFSFKFNRGAQITVRVSSVNKMLKLHA 143

Query: 586 TDEAVPVTPGIQMVEVTAPASAETYTEVASAVSSFCEYLAPLLHLSKPGISTGVVPTXXX 407
           TDEAVPVTPGIQMVEVTAPAS E Y EVA+AV SFCEYLAPLLHLSKPG+STGVVPT   
Sbjct: 144 TDEAVPVTPGIQMVEVTAPASDENYAEVAAAVQSFCEYLAPLLHLSKPGVSTGVVPTAAA 203

Query: 406 XXASLMSDGGGTTL 365
             ASLMSDGGGT L
Sbjct: 204 AAASLMSDGGGTPL 217


>ref|XP_003614099.1| Mediator of RNA polymerase II transcription subunit [Medicago
           truncatula] gi|355515434|gb|AES97057.1| Mediator of RNA
           polymerase II transcription subunit [Medicago
           truncatula]
          Length = 225

 Score =  227 bits (578), Expect = 2e-57
 Identities = 117/134 (87%), Positives = 121/134 (90%)
 Frame = -1

Query: 766 VLVRTMVESKASKNVLRMFYTLGYKLDHELLRVGFSFQFYRGAQITVTVSSINKMLKLHA 587
           VLVRTMVESK SKNVLRMFYTLGYKLDHELLRVGFSF+F RGAQITV VSS+NKMLKLHA
Sbjct: 92  VLVRTMVESKVSKNVLRMFYTLGYKLDHELLRVGFSFKFKRGAQITVRVSSVNKMLKLHA 151

Query: 586 TDEAVPVTPGIQMVEVTAPASAETYTEVASAVSSFCEYLAPLLHLSKPGISTGVVPTXXX 407
           TDEAVPVTPGIQMVEVTAPAS E Y EVA+AV SFCEYLAPLLHLSKPG+STGVVPT   
Sbjct: 152 TDEAVPVTPGIQMVEVTAPASDENYAEVAAAVQSFCEYLAPLLHLSKPGVSTGVVPTAAA 211

Query: 406 XXASLMSDGGGTTL 365
             ASLMSDGGGT L
Sbjct: 212 AAASLMSDGGGTPL 225


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