BLASTX nr result

ID: Glycyrrhiza23_contig00016855 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00016855
         (882 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003629291.1| Resistance protein [Medicago truncatula] gi|...   379   e-103
ref|XP_003629821.1| Resistance protein [Medicago truncatula] gi|...   325   8e-87
ref|XP_003549167.1| PREDICTED: TMV resistance protein N-like [Gl...   317   3e-84
ref|XP_003554889.1| PREDICTED: TMV resistance protein N-like [Gl...   304   2e-80
gb|ADF78113.1| Rj2 protein [Glycine max]                              291   1e-76

>ref|XP_003629291.1| Resistance protein [Medicago truncatula] gi|355523313|gb|AET03767.1|
            Resistance protein [Medicago truncatula]
          Length = 1039

 Score =  379 bits (973), Expect = e-103
 Identities = 194/295 (65%), Positives = 229/295 (77%), Gaps = 2/295 (0%)
 Frame = -2

Query: 881  PPIKLISLEQLDLSFCSSLESFPEILEKMENITELVLDETPIKELPHSFQNLTGLQTLQL 702
            PPIKLISLE+L++SFC++LESFPEIL KMEN+  LVL+ET  KE+P+SFQNLT LQTLQL
Sbjct: 696  PPIKLISLEELNVSFCTNLESFPEILGKMENMKNLVLEETSFKEMPNSFQNLTHLQTLQL 755

Query: 701  RC-GMLGLSINIVMMPKLVEIIAWGWEGRLLPKQDEGEEKVSPMVSSNVERFRLAHCNLS 525
            RC G+  L   I+ MPKLVEII W  EG   PK DE E+KVS MV SNVE  RL  CNLS
Sbjct: 756  RCCGVFKLPSCILTMPKLVEIIGWVSEGWQFPKSDEAEDKVSSMVPSNVESLRLTFCNLS 815

Query: 524  DEFLSIGLTWFANVKELNLSCNNFTFLPECIKEFHLLRELYLDYCWYLREVRGIPPNLEF 345
            DEF+ I LTWF NVKEL+L+ NNFT LPECIKE HLLR L +D C YL+EVRGI PNL+ 
Sbjct: 816  DEFVPIILTWFVNVKELHLAHNNFTILPECIKECHLLRVLCVDECHYLQEVRGIAPNLKI 875

Query: 344  FSAIHCKSWTCTNIVLNQELHEAGNTMFYVPGTIIPDWFEQHSSGGLISFWFRNKFPAIS 165
              A  CKS TCT + +NQELHEAG+TMFY+P + IPDWFE  SS G   FWFRNKFPAI+
Sbjct: 876  LYARGCKSLTCTEMFMNQELHEAGSTMFYLPRSRIPDWFEHCSSNGSSFFWFRNKFPAIA 935

Query: 164  LCVVTPSMFIESSVYPIVIINGNRRLLDPFND-PLIWMQPDHTYIFDLQKIRFKD 3
            LC+V  S+F+ES++YPIVIINGN   LD  +  P + ++PDHTYIFDLQ I+F+D
Sbjct: 936  LCLVPSSIFVESTIYPIVIINGNECKLDSRDRFPHLSVEPDHTYIFDLQMIKFED 990


>ref|XP_003629821.1| Resistance protein [Medicago truncatula] gi|355523843|gb|AET04297.1|
            Resistance protein [Medicago truncatula]
          Length = 780

 Score =  325 bits (833), Expect = 8e-87
 Identities = 164/253 (64%), Positives = 191/253 (75%), Gaps = 1/253 (0%)
 Frame = -2

Query: 881  PPIKLISLEQLDLSFCSSLESFPEILEKMENITELVLDETPIKELPHSFQNLTGLQTLQL 702
            PPIKL SLEQL+LSFC SL++FP+IL K ENITEL L+ETPIKE P SFQ+LT LQTLQL
Sbjct: 460  PPIKLKSLEQLNLSFCKSLKNFPQILWKKENITELGLEETPIKEFPCSFQSLTRLQTLQL 519

Query: 701  R-CGMLGLSINIVMMPKLVEIIAWGWEGRLLPKQDEGEEKVSPMVSSNVERFRLAHCNLS 525
              CG   L  NI MMP LV I AW  +G +LPKQDEGE++   +VSSNVER  L  C LS
Sbjct: 520  HYCGTFRLPNNIFMMPNLVNITAWKSQGWILPKQDEGEQRDISIVSSNVERLHLIFCILS 579

Query: 524  DEFLSIGLTWFANVKELNLSCNNFTFLPECIKEFHLLRELYLDYCWYLREVRGIPPNLEF 345
            D+F   GLTWF NVKEL+L+ NNFT LPECI+E H L +L LDYC YL+EVRGI PNLE 
Sbjct: 580  DDFFPSGLTWFRNVKELSLAHNNFTILPECIQECHFLTDLNLDYCQYLQEVRGIVPNLEI 639

Query: 344  FSAIHCKSWTCTNIVLNQELHEAGNTMFYVPGTIIPDWFEQHSSGGLISFWFRNKFPAIS 165
            FSA HC+SWTC +++LNQELH   NTMFY+PG  I +WFE  SSG  IS WFRNKFPAI+
Sbjct: 640  FSASHCRSWTCIDMLLNQELHGNRNTMFYLPGARILNWFEHRSSGQSISLWFRNKFPAIA 699

Query: 164  LCVVTPSMFIESS 126
            LC    S F++ +
Sbjct: 700  LCFAICSQFLDGT 712


>ref|XP_003549167.1| PREDICTED: TMV resistance protein N-like [Glycine max]
          Length = 1048

 Score =  317 bits (811), Expect = 3e-84
 Identities = 169/266 (63%), Positives = 201/266 (75%), Gaps = 4/266 (1%)
 Frame = -2

Query: 881  PPIKLISLEQLDLSFCSSLESFPEILEKMENITELVLDETPIKELPHSFQNLTGLQTLQL 702
            PPIKLISLEQLDLS CSSLESFPEIL KMENIT+L L  TP+KE P SF+NL  L+ L L
Sbjct: 697  PPIKLISLEQLDLSSCSSLESFPEILGKMENITQLELKYTPLKEFPFSFRNLARLRDLVL 756

Query: 701  -RCGMLGLSINIVMMPKLVEIIAWGWEGRLLPKQDEGEEKVSPMVSSNVERFRLAHCNLS 525
              CG + L I+IVM+P+L +I A G +G LLPKQD+ EE+VS M SSNV    L+ CNLS
Sbjct: 757  VDCGNVQLPISIVMLPELAQIFALGCKGLLLPKQDKDEEEVSSM-SSNVNCLCLSGCNLS 815

Query: 524  DEFLSIGLTWFANVKELNLSCNNFTFLPECIKEFHLLRELYLDYCWYLREVRGIPPNLEF 345
            DE+  + L WF+NVKEL LSCNNFTFLPECIKE H L  L LD C +L+E+RGIPPNLE+
Sbjct: 816  DEYFPMVLAWFSNVKELELSCNNFTFLPECIKECHSLILLNLDNCEHLQEIRGIPPNLEY 875

Query: 344  FSAIHCK--SWTCTNIVLNQELHEAGNTMFYVPGTIIPDWFEQHSSGGLISFWFRNKFPA 171
            FSA +CK  S+ CT ++LNQELHE GNTMF +PGT  P+WFEQ S G  +SFWFRNKFP 
Sbjct: 876  FSAGNCKSLSFCCTAMLLNQELHETGNTMFCLPGTRSPEWFEQQSIGPSLSFWFRNKFPV 935

Query: 170  ISLCVVTPSMFIESSVY-PIVIINGN 96
            + LC V   M  +S ++ PI+ INGN
Sbjct: 936  MDLCFVIGPMGKDSILFRPIMTINGN 961


>ref|XP_003554889.1| PREDICTED: TMV resistance protein N-like [Glycine max]
          Length = 1134

 Score =  304 bits (778), Expect = 2e-80
 Identities = 169/298 (56%), Positives = 205/298 (68%), Gaps = 5/298 (1%)
 Frame = -2

Query: 881  PPIKLISLEQLDLSFCSSLESFPEILEKMENITELVLDETPIKELPHSFQNLTGLQTLQL 702
            PPIKL SLE+L+LS C SLESFPEIL KMENI EL  + T IKELP S  NLT LQ LQL
Sbjct: 760  PPIKLTSLEKLNLSRCHSLESFPEILGKMENIRELQCEYTSIKELPSSIHNLTRLQELQL 819

Query: 701  -RCGMLGLSINIVMMPKLVEIIAWGWEGRLLPKQDEGEEKV-SPMVSSNVERFRLAHCNL 528
              CG++ L  +IVMMP+L E+I W W+G    KQ+EGEEK  S +VSS VE    + CNL
Sbjct: 820  ANCGVVQLPSSIVMMPELTELIGWKWKGWQWLKQEEGEEKFGSSIVSSKVELLWASDCNL 879

Query: 527  SDEFLSIGLTWFANVKELNLSCNNFTFLPECIKEFHLLRELYLDYCWYLREVRGIPPNLE 348
             D+F SIG T FA+VK+LNLS NNFT LPECIKEF  LR+L ++ C +L+E+RGIPP+L+
Sbjct: 880  YDDFFSIGFTRFAHVKDLNLSKNNFTMLPECIKEFQFLRKLNVNDCKHLQEIRGIPPSLK 939

Query: 347  FFSAIHCKSWT--CTNIVLNQELHEAGNTMFYVPGTIIPDWFEQHSSGGLISFWFRNKFP 174
             F A +CKS T   T++ LNQELHE G T FY+PG  IP+WF+  S G  ISFWFRNKFP
Sbjct: 940  HFLATNCKSLTSSSTSMFLNQELHETGKTQFYLPGERIPEWFDHQSRGPSISFWFRNKFP 999

Query: 173  AISLCVVTPSMFIESS-VYPIVIINGNRRLLDPFNDPLIWMQPDHTYIFDLQKIRFKD 3
               LC+V   M  +S  +   VIINGN+            M  DHTY+FDLQ + F+D
Sbjct: 1000 GKVLCLVIGPMDDDSGMLISKVIINGNKYFR---GSGYFMMGMDHTYLFDLQIMEFED 1054


>gb|ADF78113.1| Rj2 protein [Glycine max]
          Length = 1052

 Score =  291 bits (746), Expect = 1e-76
 Identities = 166/302 (54%), Positives = 207/302 (68%), Gaps = 9/302 (2%)
 Frame = -2

Query: 881  PPIKLISLEQLDLSFCSSLESFPEILEKMENITELVLDETPIKELPHSFQNLTGLQTLQL 702
            PPIKL SLE+L+LSFC SLESFP+IL KMENI +L L E+ I ELP SFQNL GLQ L+L
Sbjct: 698  PPIKLTSLEKLNLSFCYSLESFPKILGKMENIRQLCLSESSITELPFSFQNLAGLQALEL 757

Query: 701  RC----GMLGLSINIVMMPKLVEIIAWGWEGRLLPKQDEGEEKVSPMVSSNVERFRLAHC 534
            R      +  +  +IV+MP+L EI   G +G    KQ+EGEEK   +VSS V R  +A C
Sbjct: 758  RFLSPHAIFKVPSSIVLMPELTEIFVVGLKGWQWLKQEEGEEKTGSIVSSKVVRLTVAIC 817

Query: 533  NLSDEFLSIGLTWFANVKELNLSCNNFTFLPECIKEFHLLRELYLDYCWYLREVRGIPPN 354
            NLSDEF SI  TWFA++KEL LS NNFT LPECIKE   LR L +  C +LRE+RGIPPN
Sbjct: 818  NLSDEFFSIDFTWFAHMKELCLSENNFTILPECIKECQFLRILDVCDCKHLREIRGIPPN 877

Query: 353  LEFFSAIHCKSWTCTNI--VLNQELHEAGNTMFYVPGTIIPDWFEQHSSGGLISFWFRNK 180
            L+ F AI+CKS T ++I   LNQELHEAGNT+F +PG  IP+WF+Q S G  ISFWFRNK
Sbjct: 878  LKHFFAINCKSLTSSSIRKFLNQELHEAGNTVFCLPGKRIPEWFDQQSRGPSISFWFRNK 937

Query: 179  FPAISLCVVTPSMFIESSVY-PIVIINGNRRLLDPFNDPLIWMQP--DHTYIFDLQKIRF 9
            FP + LC++     I S  + P V INGN     P++    + Q    H Y+ DL++I+F
Sbjct: 938  FPDMVLCLIVAP--IRSQFFRPEVFINGNE--CSPYS---CYFQKGMHHAYLCDLREIKF 990

Query: 8    KD 3
            ++
Sbjct: 991  RN 992


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