BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00016844
         (628 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003542754.1| PREDICTED: general transcription factor IIH ...   324   7e-87
ref|XP_003601071.1| General transcription factor IIH subunit [Me...   323   2e-86
ref|XP_003637396.1| General transcription factor IIH subunit [Me...   322   4e-86
ref|XP_003529318.1| PREDICTED: general transcription factor IIH ...   321   8e-86
ref|XP_002519045.1| tfiih, polypeptide, putative [Ricinus commun...   295   6e-78

>ref|XP_003542754.1| PREDICTED: general transcription factor IIH subunit 4-like [Glycine
           max]
          Length = 451

 Score =  324 bits (831), Expect = 7e-87
 Identities = 155/169 (91%), Positives = 165/169 (97%)
 Frame = -2

Query: 627 NLSVSMTESSSRKQGFVVVETNFRVYAYSTSKLHCEILRLFSRVEYQLPNLIVGAITKES 448
           NLS+S+ +SSSRKQGFVVVETNFRVYAYSTSKLHCEILRLFSRVEYQLPNLIVGAITKES
Sbjct: 283 NLSMSLADSSSRKQGFVVVETNFRVYAYSTSKLHCEILRLFSRVEYQLPNLIVGAITKES 342

Query: 447 LYGAFENGITAQQIISFLQQNAHPRVAERIPSIPENVTDQIRLWDSDLNRVEMTEAYYYD 268
           LY AFENGITA+QII+FLQQNAHPRVAERIPS+PENVT+QIRLW++DLNRVEMT+AYYYD
Sbjct: 343 LYSAFENGITAEQIITFLQQNAHPRVAERIPSVPENVTEQIRLWEADLNRVEMTDAYYYD 402

Query: 267 EFPSRDVFEGACDCAREWNGLLWEDSKKMHMVVMTEVHTYVRDYLRRQK 121
           EFPSRDVFEGACDCAREWNGLLWEDSKKMHMVV TEVH YVRDYLRRQK
Sbjct: 403 EFPSRDVFEGACDCAREWNGLLWEDSKKMHMVVKTEVHQYVRDYLRRQK 451


>ref|XP_003601071.1| General transcription factor IIH subunit [Medicago truncatula]
           gi|355490119|gb|AES71322.1| General transcription factor
           IIH subunit [Medicago truncatula]
          Length = 452

 Score =  323 bits (828), Expect = 2e-86
 Identities = 153/169 (90%), Positives = 166/169 (98%)
 Frame = -2

Query: 627 NLSVSMTESSSRKQGFVVVETNFRVYAYSTSKLHCEILRLFSRVEYQLPNLIVGAITKES 448
           NLSVSMTESSSRK+GFVVVETNFRVYAYSTSKLHCEILRLFSRVEYQLPNLIVGAITKES
Sbjct: 284 NLSVSMTESSSRKEGFVVVETNFRVYAYSTSKLHCEILRLFSRVEYQLPNLIVGAITKES 343

Query: 447 LYGAFENGITAQQIISFLQQNAHPRVAERIPSIPENVTDQIRLWDSDLNRVEMTEAYYYD 268
           LY AF+NGITA QI+SFL+QNAHPRVA+R+P++PENVTDQIRLW+SDLNRVEMTEAYYYD
Sbjct: 344 LYNAFDNGITADQIVSFLRQNAHPRVAQRVPAVPENVTDQIRLWESDLNRVEMTEAYYYD 403

Query: 267 EFPSRDVFEGACDCAREWNGLLWEDSKKMHMVVMTEVHTYVRDYLRRQK 121
           EFPSRDVFEGACDCAREW+GLLWEDSKKMH+VV +EVHTYVRD+LRRQK
Sbjct: 404 EFPSRDVFEGACDCAREWSGLLWEDSKKMHLVVKSEVHTYVRDFLRRQK 452


>ref|XP_003637396.1| General transcription factor IIH subunit [Medicago truncatula]
           gi|355503331|gb|AES84534.1| General transcription factor
           IIH subunit [Medicago truncatula]
          Length = 451

 Score =  322 bits (825), Expect = 4e-86
 Identities = 153/169 (90%), Positives = 165/169 (97%)
 Frame = -2

Query: 627 NLSVSMTESSSRKQGFVVVETNFRVYAYSTSKLHCEILRLFSRVEYQLPNLIVGAITKES 448
           NLSVSMTESSSRK+GFVVVETNFRVYAYSTSKLHCEILRLFSRVEYQLPNLIVGAITKES
Sbjct: 283 NLSVSMTESSSRKEGFVVVETNFRVYAYSTSKLHCEILRLFSRVEYQLPNLIVGAITKES 342

Query: 447 LYGAFENGITAQQIISFLQQNAHPRVAERIPSIPENVTDQIRLWDSDLNRVEMTEAYYYD 268
           LY AF+NGITA QI+SF +QNAHPRVA+RIP++PENVTDQIRLW+SDLNRVEMTEAYYYD
Sbjct: 343 LYNAFDNGITADQIVSFFRQNAHPRVAQRIPAVPENVTDQIRLWESDLNRVEMTEAYYYD 402

Query: 267 EFPSRDVFEGACDCAREWNGLLWEDSKKMHMVVMTEVHTYVRDYLRRQK 121
           EFPSRDVFEGACDCAREW+GLLWEDSKKMH+VV +EVHTYVRD+LRRQK
Sbjct: 403 EFPSRDVFEGACDCAREWSGLLWEDSKKMHLVVKSEVHTYVRDFLRRQK 451


>ref|XP_003529318.1| PREDICTED: general transcription factor IIH subunit 4-like [Glycine
           max]
          Length = 451

 Score =  321 bits (822), Expect = 8e-86
 Identities = 151/169 (89%), Positives = 164/169 (97%)
 Frame = -2

Query: 627 NLSVSMTESSSRKQGFVVVETNFRVYAYSTSKLHCEILRLFSRVEYQLPNLIVGAITKES 448
           NLS+S+ +SSSRKQGFVVVETNFRVYAYSTSKLHCEILRLFSRVEYQLPNLIVGAITKES
Sbjct: 283 NLSMSLADSSSRKQGFVVVETNFRVYAYSTSKLHCEILRLFSRVEYQLPNLIVGAITKES 342

Query: 447 LYGAFENGITAQQIISFLQQNAHPRVAERIPSIPENVTDQIRLWDSDLNRVEMTEAYYYD 268
           LY A+ENGITA+QI++FLQQNAHPRVAER+PS+PENVT+QIRLW++DLNRVEMT+ YYYD
Sbjct: 343 LYSAYENGITAEQIVTFLQQNAHPRVAERVPSVPENVTEQIRLWEADLNRVEMTDTYYYD 402

Query: 267 EFPSRDVFEGACDCAREWNGLLWEDSKKMHMVVMTEVHTYVRDYLRRQK 121
           EFPSRDVFEGACDCAREWNGLLWEDSKKMHMVV TEVH YVRDYLRRQK
Sbjct: 403 EFPSRDVFEGACDCAREWNGLLWEDSKKMHMVVKTEVHPYVRDYLRRQK 451


>ref|XP_002519045.1| tfiih, polypeptide, putative [Ricinus communis]
           gi|223541708|gb|EEF43256.1| tfiih, polypeptide, putative
           [Ricinus communis]
          Length = 451

 Score =  295 bits (754), Expect = 6e-78
 Identities = 140/169 (82%), Positives = 158/169 (93%)
 Frame = -2

Query: 627 NLSVSMTESSSRKQGFVVVETNFRVYAYSTSKLHCEILRLFSRVEYQLPNLIVGAITKES 448
           NLS+S+T+SSSRKQGFVVVETNFR+YAYSTSKLHCEI+RLFSRVEYQLPNL+VGA+TKES
Sbjct: 283 NLSMSLTDSSSRKQGFVVVETNFRMYAYSTSKLHCEIMRLFSRVEYQLPNLVVGAMTKES 342

Query: 447 LYGAFENGITAQQIISFLQQNAHPRVAERIPSIPENVTDQIRLWDSDLNRVEMTEAYYYD 268
           LY AFENGITA+QIISFLQQNAHPRVAERIPS+PENVTDQIRLW+SD+NRVEMT A+ YD
Sbjct: 343 LYSAFENGITAEQIISFLQQNAHPRVAERIPSVPENVTDQIRLWESDMNRVEMTPAHLYD 402

Query: 267 EFPSRDVFEGACDCAREWNGLLWEDSKKMHMVVMTEVHTYVRDYLRRQK 121
           EFPSRDVFE AC+ AR+WNGLLWEDSK+M MVV  E+H  +R+YLR QK
Sbjct: 403 EFPSRDVFEAACNFARDWNGLLWEDSKRMRMVVKAEIHLNMREYLRGQK 451