BLASTX nr result

ID: Glycyrrhiza23_contig00016830 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00016830
         (580 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABN08837.1| Helix-hairpin-helix motif, class 2 [Medicago trun...   233   2e-59
ref|XP_003623847.1| Flap endonuclease GEN-like protein [Medicago...   233   2e-59
ref|XP_003534589.1| PREDICTED: flap endonuclease GEN-like 1-like...   213   2e-53
ref|XP_002273159.1| PREDICTED: flap endonuclease GEN-like 1 [Vit...   154   1e-35
ref|XP_002511787.1| DNA binding protein, putative [Ricinus commu...   150   2e-34

>gb|ABN08837.1| Helix-hairpin-helix motif, class 2 [Medicago truncatula]
          Length = 547

 Score =  233 bits (593), Expect = 2e-59
 Identities = 115/157 (73%), Positives = 132/157 (84%), Gaps = 8/157 (5%)
 Frame = -1

Query: 580 LFGQYEFDSLERVKVRYGYQLYVVKWKRAAGNIAFKTPSNKSGTRQDDVIDEPDETVDLL 401
           LFGQ+EF SL+RVK RYGYQ YVVKWKRA GNIA KTP+NKSG ++D +  + DETVDLL
Sbjct: 359 LFGQFEFASLKRVKTRYGYQFYVVKWKRAMGNIASKTPANKSGMQEDVIELDVDETVDLL 418

Query: 400 DDCDAPEICEDDGCSFLLTDENMDLVGAAFPEEVERFLQEQELKDMKRRKNST--SQENE 227
           DDCD P+ICE+DGCSFLLTDENMDLVGAA+PEEV+RF QEQELKD+KR+KN T  SQENE
Sbjct: 419 DDCDFPQICEEDGCSFLLTDENMDLVGAAYPEEVKRFRQEQELKDVKRKKNPTSISQENE 478

Query: 226 K------SRSIQLNITEFYPSTKYKHQPKHGEESSKN 134
           K      S+ +QLNITEF+P+TK KH PKHGEESS N
Sbjct: 479 KSSTSPNSKGVQLNITEFFPTTKSKHNPKHGEESSSN 515


>ref|XP_003623847.1| Flap endonuclease GEN-like protein [Medicago truncatula]
           gi|124360235|gb|ABN08248.1| Helix-hairpin-helix motif,
           class 2 [Medicago truncatula]
           gi|355498862|gb|AES80065.1| Flap endonuclease GEN-like
           protein [Medicago truncatula]
          Length = 612

 Score =  233 bits (593), Expect = 2e-59
 Identities = 115/157 (73%), Positives = 132/157 (84%), Gaps = 8/157 (5%)
 Frame = -1

Query: 580 LFGQYEFDSLERVKVRYGYQLYVVKWKRAAGNIAFKTPSNKSGTRQDDVIDEPDETVDLL 401
           LFGQ+EF SL+RVK RYGYQ YVVKWKRA GNIA KTP+NKSG ++D +  + DETVDLL
Sbjct: 424 LFGQFEFASLKRVKTRYGYQFYVVKWKRAMGNIASKTPANKSGMQEDVIELDVDETVDLL 483

Query: 400 DDCDAPEICEDDGCSFLLTDENMDLVGAAFPEEVERFLQEQELKDMKRRKNST--SQENE 227
           DDCD P+ICE+DGCSFLLTDENMDLVGAA+PEEV+RF QEQELKD+KR+KN T  SQENE
Sbjct: 484 DDCDFPQICEEDGCSFLLTDENMDLVGAAYPEEVKRFRQEQELKDVKRKKNPTSISQENE 543

Query: 226 K------SRSIQLNITEFYPSTKYKHQPKHGEESSKN 134
           K      S+ +QLNITEF+P+TK KH PKHGEESS N
Sbjct: 544 KSSTSPNSKGVQLNITEFFPTTKSKHNPKHGEESSSN 580


>ref|XP_003534589.1| PREDICTED: flap endonuclease GEN-like 1-like [Glycine max]
          Length = 607

 Score =  213 bits (541), Expect = 2e-53
 Identities = 117/159 (73%), Positives = 125/159 (78%), Gaps = 6/159 (3%)
 Frame = -1

Query: 580 LFGQYEFDSLERVKVRYGYQLYVVKWKRAAGNIAFKTPSNKSGTRQDDVIDEPDETVDLL 401
           LFGQYEFDS+ERVK+RYGYQ +VVKWKRA  NI+ K P  +S  +QDD I E DE VDLL
Sbjct: 423 LFGQYEFDSVERVKMRYGYQFFVVKWKRAGVNISCKVPLKESSVQQDDAI-ELDEMVDLL 481

Query: 400 DDCDAPEICEDDGCSFLLTDENMDLVGAAFPEEVERFLQEQELKDMKRRKNSTSQENEK- 224
           DD DAPEI  DDGCSFLLTDENMDLVGAAFP EV+RF QEQELK +K    S SQENEK 
Sbjct: 482 DDFDAPEIHGDDGCSFLLTDENMDLVGAAFPAEVKRFWQEQELKRIK-NSTSRSQENEKS 540

Query: 223 ----SRSIQLNITEFYPSTKYKH-QPKHGEESSKNVDSQ 122
               SRSIQLNITEFYPSTK KH Q K GEESSKN DSQ
Sbjct: 541 PSPNSRSIQLNITEFYPSTKVKHRQSKQGEESSKNADSQ 579


>ref|XP_002273159.1| PREDICTED: flap endonuclease GEN-like 1 [Vitis vinifera]
           gi|296089141|emb|CBI38844.3| unnamed protein product
           [Vitis vinifera]
          Length = 667

 Score =  154 bits (389), Expect = 1e-35
 Identities = 83/164 (50%), Positives = 112/164 (68%), Gaps = 11/164 (6%)
 Frame = -1

Query: 580 LFGQYEFDSLERVKVRYGYQLYVVKWKRAA---GNIAFKTPSNKSGTRQDDVIDEPDETV 410
           L+GQYEFDS++RVKVR+G+Q +VVKWK+A     ++A+  P +     + + + E DE++
Sbjct: 480 LYGQYEFDSIQRVKVRFGHQFFVVKWKKAVHAMASVAYTIPGDSD--IEQEKLTEVDESI 537

Query: 409 DLLDDCDAPEICEDDGCSFLLTDENMDLVGAAFPEEVERFLQEQELKDMKRRKNS----- 245
           DLLD+C+ P+I  DDGC FLLTDENMDLV AAFPEEV RFL E+ELK+ KRR  S     
Sbjct: 538 DLLDECNVPQIHVDDGCWFLLTDENMDLVRAAFPEEVNRFLLEKELKESKRRNKSGLRSE 597

Query: 244 ---TSQENEKSRSIQLNITEFYPSTKYKHQPKHGEESSKNVDSQ 122
                 ++ KS+ +QL+ITEFY S K     K  E+S+ N D+Q
Sbjct: 598 GVEEMPDSPKSKGVQLSITEFYRSAKVIFHEK-PEDSAGNSDAQ 640


>ref|XP_002511787.1| DNA binding protein, putative [Ricinus communis]
           gi|223548967|gb|EEF50456.1| DNA binding protein,
           putative [Ricinus communis]
          Length = 609

 Score =  150 bits (378), Expect = 2e-34
 Identities = 76/158 (48%), Positives = 114/158 (72%), Gaps = 5/158 (3%)
 Frame = -1

Query: 580 LFGQYEFDSLERVKVRYGYQLYVVKWKRAAGNIAFKTPSN---KSGTRQDDVIDEPDETV 410
           L+GQYEFDS++R+KVRYG++ YV+KWK+AA  I+     N   +    Q+D++ + DE++
Sbjct: 426 LYGQYEFDSIQRIKVRYGHESYVIKWKKAANTISSNICINIVEELDKHQEDIV-KTDESI 484

Query: 409 DLLDDCDAPEICEDDGCSFLLTDENMDLVGAAFPEEVERFLQEQELKDMKRRKNSTSQEN 230
           D L++ + P+   DDGC FLLTDENMDLV  AFP+ V++FL+E+E K+ KRR +S+++++
Sbjct: 485 DQLEEYNVPKSYVDDGCWFLLTDENMDLVQNAFPDAVDKFLKEKEQKESKRRLSSSTEKS 544

Query: 229 E--KSRSIQLNITEFYPSTKYKHQPKHGEESSKNVDSQ 122
           E  KS+ +QLNITEFY STK +     GEE +   ++Q
Sbjct: 545 ESVKSKGVQLNITEFYRSTKVQFAASGGEEQADCSENQ 582


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