BLASTX nr result

ID: Glycyrrhiza23_contig00016794 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00016794
         (618 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003537512.1| PREDICTED: ubiquitin carboxyl-terminal hydro...   122   7e-26
ref|XP_003552761.1| PREDICTED: ubiquitin carboxyl-terminal hydro...   112   7e-23
ref|XP_003601616.1| Ubiquitin carboxyl-terminal hydrolase [Medic...   103   2e-20
ref|XP_002518086.1| conserved hypothetical protein [Ricinus comm...    79   6e-13
ref|XP_004157719.1| PREDICTED: LOW QUALITY PROTEIN: ubiquitin ca...    77   2e-12

>ref|XP_003537512.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 2-like [Glycine
           max]
          Length = 1052

 Score =  122 bits (305), Expect = 7e-26
 Identities = 68/97 (70%), Positives = 73/97 (75%)
 Frame = -2

Query: 293 RELMGKKVRKKSRGSAKEKGVATTHSPKKDMELGNPTAEFVDAGVSVAKETNPCPHLVKG 114
           +ELMGKKVRKK+RGSAKEKGVAT H P K +E  NPT E VD    VAKETN CPHLVKG
Sbjct: 70  QELMGKKVRKKTRGSAKEKGVAT-HLPIKVIESSNPTVESVD---EVAKETNSCPHLVKG 125

Query: 113 VNLNRLSGKIESSGTVRCEDCREKAADRRXXXXXXKH 3
           VN +RLS KI SSG+VRCEDCRE A DRR      KH
Sbjct: 126 VNFDRLSTKIGSSGSVRCEDCREGANDRRSGKGKGKH 162


>ref|XP_003552761.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 2-like [Glycine
           max]
          Length = 980

 Score =  112 bits (279), Expect = 7e-23
 Identities = 61/94 (64%), Positives = 68/94 (72%)
 Frame = -2

Query: 284 MGKKVRKKSRGSAKEKGVATTHSPKKDMELGNPTAEFVDAGVSVAKETNPCPHLVKGVNL 105
           MGKKVRKK+RGSAKE GVAT H P K +E  NPT E  D    VAKETN CPHLVKGVN 
Sbjct: 1   MGKKVRKKTRGSAKEMGVAT-HLPIKVIESSNPTVESFD---EVAKETNSCPHLVKGVNF 56

Query: 104 NRLSGKIESSGTVRCEDCREKAADRRXXXXXXKH 3
           +RLS K+ SSG++RCEDCRE A +RR      KH
Sbjct: 57  DRLSTKVGSSGSIRCEDCREGATNRRSGKGKGKH 90


>ref|XP_003601616.1| Ubiquitin carboxyl-terminal hydrolase [Medicago truncatula]
           gi|355490664|gb|AES71867.1| Ubiquitin carboxyl-terminal
           hydrolase [Medicago truncatula]
          Length = 1070

 Score =  103 bits (258), Expect = 2e-20
 Identities = 56/95 (58%), Positives = 63/95 (66%), Gaps = 1/95 (1%)
 Frame = -2

Query: 284 MGKKVRKKSRGSAKEKGVATTHSPKKDMELGNP-TAEFVDAGVSVAKETNPCPHLVKGVN 108
           M KK++K+ R S KEK V    SPK   E  NP T E V   VSVAKETNPCPHLVKG+ 
Sbjct: 1   MAKKIKKRGRSSVKEKAVIIDSSPKIVTESCNPPTTESVGEEVSVAKETNPCPHLVKGIQ 60

Query: 107 LNRLSGKIESSGTVRCEDCREKAADRRXXXXXXKH 3
           L+ LSGK+ESS  +RCE CRE AADRR      KH
Sbjct: 61  LDILSGKVESSAPIRCEGCREGAADRRGGKGKGKH 95


>ref|XP_002518086.1| conserved hypothetical protein [Ricinus communis]
           gi|223542682|gb|EEF44219.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 1006

 Score = 79.0 bits (193), Expect = 6e-13
 Identities = 46/95 (48%), Positives = 58/95 (61%), Gaps = 1/95 (1%)
 Frame = -2

Query: 284 MGKKVRKKSRGSAKEKGVATTHSPKKDMELGNPTAEFVDA-GVSVAKETNPCPHLVKGVN 108
           MGK+V+KKSR   KEK V+T HSPK   +   P+ +  +   V+V KE   C HL KG N
Sbjct: 1   MGKRVKKKSRSLQKEKRVST-HSPKVAPQQTTPSVDVNERITVAVVKERKQCVHLGKGFN 59

Query: 107 LNRLSGKIESSGTVRCEDCREKAADRRXXXXXXKH 3
           LN L+ K+ SS  ++CEDCRE  ADRR      KH
Sbjct: 60  LNNLTVKLGSSDPLKCEDCREGVADRRGAKGKGKH 94


>ref|XP_004157719.1| PREDICTED: LOW QUALITY PROTEIN: ubiquitin carboxyl-terminal
           hydrolase 2-like [Cucumis sativus]
          Length = 1225

 Score = 77.0 bits (188), Expect = 2e-12
 Identities = 42/95 (44%), Positives = 59/95 (62%), Gaps = 1/95 (1%)
 Frame = -2

Query: 284 MGKKVRKKS-RGSAKEKGVATTHSPKKDMELGNPTAEFVDAGVSVAKETNPCPHLVKGVN 108
           MGKKV+KK+ R   KEK V+++ SP+K  +  N T E  D  +S+ KE + C HL K  N
Sbjct: 1   MGKKVKKKTNRAPPKEKRVSSS-SPRKVPQPSNTTVETADEEISIVKEKSQCGHLDKCFN 59

Query: 107 LNRLSGKIESSGTVRCEDCREKAADRRXXXXXXKH 3
           LN LS K+ S+  + CEDC++ +ADRR      +H
Sbjct: 60  LNELSSKLGSAEPISCEDCQDSSADRRGGRGKARH 94


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