BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00016780
         (1858 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003623229.1| Pentatricopeptide repeat-containing protein ...   723   0.0  
ref|XP_003530271.1| PREDICTED: pentatricopeptide repeat-containi...   688   0.0  
ref|XP_002276327.1| PREDICTED: pentatricopeptide repeat-containi...   533   e-149
emb|CBI24253.3| unnamed protein product [Vitis vinifera]              447   e-123
ref|NP_194530.1| pentatricopeptide repeat-containing protein [Ar...   407   e-111

>ref|XP_003623229.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
            gi|355498244|gb|AES79447.1| Pentatricopeptide
            repeat-containing protein [Medicago truncatula]
          Length = 770

 Score =  723 bits (1865), Expect = 0.0
 Identities = 365/533 (68%), Positives = 425/533 (79%), Gaps = 2/533 (0%)
 Frame = +1

Query: 265  MIPKRLLNPPRSTFFIPTNVCPFHVXXXXXXXXXXXX-LTEAVSLFHRAVED-PDSVPSV 438
            MI KRL     S   IPT + PFH              L+E++S FH  ++D P+S+PS 
Sbjct: 1    MILKRLFQFSHS-ISIPTTLRPFHSSSSSSSYSSLSPALSESLSHFHHTLQDYPNSIPSY 59

Query: 439  PACNSLIHNLRKARHYDLVVSVYSKMAGACVLPSFTSLSALVESFVNTHKPKFAFGVLGL 618
             +CN+LI NLRKA+HYD V+SV+SKMA   V P FTSLSAL+ESFVNT KP FAFGVLGL
Sbjct: 60   SSCNTLIDNLRKAKHYDHVISVHSKMASVSVFPCFTSLSALIESFVNTQKPSFAFGVLGL 119

Query: 619  MIKHGFEVNVYNVNLVLKGFCQSGDCDKAMGLFCQMKRNCVLPDSISYNTIVNGLCKAKR 798
            ++K GF +NVYN NL+LKGFCQSGD  KAM LFC MKRNC++PD +SYNT++NGLCK KR
Sbjct: 120  IMKRGFHLNVYNFNLLLKGFCQSGDSHKAMDLFCMMKRNCLIPDCVSYNTVINGLCKGKR 179

Query: 799  SVEARDLFEAMKAGDCKPNLVTFSALIDGLCKNXXXXXXXXXXXXXXXXXXXANVFVYSA 978
             VEA++LF+ MK G+CKPN VTFSALIDG CKN                    +VFVYSA
Sbjct: 180  LVEAKELFKEMKGGECKPNSVTFSALIDGFCKNGDVEEGFGLLEEMEKMGLEGDVFVYSA 239

Query: 979  LISAFCNKGEIERGKQLFDEMLGKNVTPNVVTYSCLMHALCKTGKWQEASQMLNDMTTSR 1158
            LIS FC+KG+IERGK+LF+EML KNVTPNVVTYSCLM+ALCK  KW+EA+QML+ MT  +
Sbjct: 240  LISGFCSKGDIERGKELFNEMLRKNVTPNVVTYSCLMNALCKKQKWKEAAQMLDTMTGCK 299

Query: 1159 VHPDVVAYTVLADGLCKNGRASDAVKVLDLMVQKGEEPNTLTYNAVINGLCKEGRVDDAL 1338
            V PDVVAYTVLADGL KNGRASDA+KVLDLMV++GEEPN +TYNA+INGLCKEGRVDDAL
Sbjct: 300  VRPDVVAYTVLADGLSKNGRASDAIKVLDLMVKRGEEPNNVTYNAIINGLCKEGRVDDAL 359

Query: 1339 KILEMMAKKGKKPDVVTYNTLLKGLAGVGKIEEAMELWELLLSKEFHIKPDVFTLNFLIQ 1518
             ILE MAKKGKKPDVVTY+TL+KGL GVGKI+EA++L  LL+SKEFHIKPDVF  N +IQ
Sbjct: 360  GILETMAKKGKKPDVVTYSTLVKGLCGVGKIDEAVDLLNLLMSKEFHIKPDVFAFNLVIQ 419

Query: 1519 GLCKERRLGDAVRIYSTMVQRGFQVNIVTYNILIDGYLNAGKITKALELWKYAVDLGFSP 1698
             LCK+RRL  A R+Y TMV+RGF  NIVTYNILIDGYL+AGK+TKALELWK AVD G SP
Sbjct: 420  ELCKQRRLRHAKRVYYTMVERGFPSNIVTYNILIDGYLSAGKLTKALELWKDAVDSGISP 479

Query: 1699 NSVTCTILIDGLCRMQMLRMAKGLFNKKRASGVRPTVIEYNALMASLCRESSL 1857
            N+ T T+LI+GLC+MQML +AKGLFNKKRASG RPTV EYN LMASLCRESS+
Sbjct: 480  NAATYTVLINGLCKMQMLSIAKGLFNKKRASGTRPTVSEYNTLMASLCRESSV 532



 Score =  172 bits (436), Expect = 3e-40
 Identities = 111/416 (26%), Positives = 189/416 (45%), Gaps = 2/416 (0%)
 Frame = +1

Query: 502  VYSKMAGACVLPSFTSLSALVESFVNTHKPKFAFGVLGLMIKHGFEVNVYNVNLVLKGFC 681
            ++++M    V P+  + S L+ +     K K A  +L  M       +V    ++  G  
Sbjct: 256  LFNEMLRKNVTPNVVTYSCLMNALCKKQKWKEAAQMLDTMTGCKVRPDVVAYTVLADGLS 315

Query: 682  QSGDCDKAMGLFCQMKRNCVLPDSISYNTIVNGLCKAKRSVEARDLFEAMKAGDCKPNLV 861
            ++G    A+ +   M +    P++++YN I+NGLCK  R  +A  + E M     KP++V
Sbjct: 316  KNGRASDAIKVLDLMVKRGEEPNNVTYNAIINGLCKEGRVDDALGILETMAKKGKKPDVV 375

Query: 862  TFSALIDGLCK--NXXXXXXXXXXXXXXXXXXXANVFVYSALISAFCNKGEIERGKQLFD 1035
            T+S L+ GLC                        +VF ++ +I   C +  +   K+++ 
Sbjct: 376  TYSTLVKGLCGVGKIDEAVDLLNLLMSKEFHIKPDVFAFNLVIQELCKQRRLRHAKRVYY 435

Query: 1036 EMLGKNVTPNVVTYSCLMHALCKTGKWQEASQMLNDMTTSRVHPDVVAYTVLADGLCKNG 1215
             M+ +    N+VTY+ L+      GK  +A ++  D   S + P+   YTVL +GLCK  
Sbjct: 436  TMVERGFPSNIVTYNILIDGYLSAGKLTKALELWKDAVDSGISPNAATYTVLINGLCKMQ 495

Query: 1216 RASDAVKVLDLMVQKGEEPNTLTYNAVINGLCKEGRVDDALKILEMMAKKGKKPDVVTYN 1395
              S A  + +     G  P    YN ++  LC+E  V+ A  + + M      PDVV++N
Sbjct: 496  MLSIAKGLFNKKRASGTRPTVSEYNTLMASLCRESSVEQARNLFQEMRNANHDPDVVSFN 555

Query: 1396 TLLKGLAGVGKIEEAMELWELLLSKEFHIKPDVFTLNFLIQGLCKERRLGDAVRIYSTMV 1575
             ++ G    G +E A EL  LL     ++ PD  T + LI    K  +L +A  +Y  MV
Sbjct: 556  IIIDGTLKAGDVESAKEL--LLEMLNMNLVPDNITFSILINRFLKLGQLDEAASLYERMV 613

Query: 1576 QRGFQVNIVTYNILIDGYLNAGKITKALELWKYAVDLGFSPNSVTCTILIDGLCRM 1743
              G   + V ++ L+ GY   GK  K + + +   D     +S   + ++  LC M
Sbjct: 614  SCGHVPDAVLFDSLLKGYSLKGKTEKVVSMLQQMADKDVVLDSKLTSTILACLCNM 669



 Score =  156 bits (395), Expect = 2e-35
 Identities = 95/385 (24%), Positives = 173/385 (44%), Gaps = 37/385 (9%)
 Frame = +1

Query: 430  PSVPACNSLIHNLRKARHYDLVVSVYSKMAGACVLPSFTSLSALVESFVNTHKPKFAFGV 609
            P+V   + L++ L K + +     +   M G  V P   + + L +      +   A  V
Sbjct: 267  PNVVTYSCLMNALCKKQKWKEAAQMLDTMTGCKVRPDVVAYTVLADGLSKNGRASDAIKV 326

Query: 610  LGLMIKHGFEVNVYNVNLVLKGFCQSGDCDKAMGLFCQMKRNCVLPDSISYNTIVNGLCK 789
            L LM+K G E N    N ++ G C+ G  D A+G+   M +    PD ++Y+T+V GLC 
Sbjct: 327  LDLMVKRGEEPNNVTYNAIINGLCKEGRVDDALGILETMAKKGKKPDVVTYSTLVKGLCG 386

Query: 790  AKRSVEARDLFEAMKAGD--CKPNLVTFSALIDGLCKNXXXXXXXXXXXXXXXXXXXANV 963
              +  EA DL   + + +   KP++  F+ +I  LCK                    +N+
Sbjct: 387  VGKIDEAVDLLNLLMSKEFHIKPDVFAFNLVIQELCKQRRLRHAKRVYYTMVERGFPSNI 446

Query: 964  FVYSALISAFCNKGEIERGKQLFDEMLGKNVTPNVVTYSCLMHALCKT------------ 1107
              Y+ LI  + + G++ +  +L+ + +   ++PN  TY+ L++ LCK             
Sbjct: 447  VTYNILIDGYLSAGKLTKALELWKDAVDSGISPNAATYTVLINGLCKMQMLSIAKGLFNK 506

Query: 1108 -----------------------GKWQEASQMLNDMTTSRVHPDVVAYTVLADGLCKNGR 1218
                                      ++A  +  +M  +   PDVV++ ++ DG  K G 
Sbjct: 507  KRASGTRPTVSEYNTLMASLCRESSVEQARNLFQEMRNANHDPDVVSFNIIIDGTLKAGD 566

Query: 1219 ASDAVKVLDLMVQKGEEPNTLTYNAVINGLCKEGRVDDALKILEMMAKKGKKPDVVTYNT 1398
               A ++L  M+     P+ +T++ +IN   K G++D+A  + E M   G  PD V +++
Sbjct: 567  VESAKELLLEMLNMNLVPDNITFSILINRFLKLGQLDEAASLYERMVSCGHVPDAVLFDS 626

Query: 1399 LLKGLAGVGKIEEAMELWELLLSKE 1473
            LLKG +  GK E+ + + + +  K+
Sbjct: 627  LLKGYSLKGKTEKVVSMLQQMADKD 651



 Score =  110 bits (275), Expect = 1e-21
 Identities = 67/295 (22%), Positives = 130/295 (44%)
 Frame = +1

Query: 529  VLPSFTSLSALVESFVNTHKPKFAFGVLGLMIKHGFEVNVYNVNLVLKGFCQSGDCDKAM 708
            + P   + + +++      + + A  V   M++ GF  N+   N+++ G+  +G   KA+
Sbjct: 407  IKPDVFAFNLVIQELCKQRRLRHAKRVYYTMVERGFPSNIVTYNILIDGYLSAGKLTKAL 466

Query: 709  GLFCQMKRNCVLPDSISYNTIVNGLCKAKRSVEARDLFEAMKAGDCKPNLVTFSALIDGL 888
             L+     + + P++ +Y  ++NGLCK +    A+ LF   +A   +P +  ++ L+  L
Sbjct: 467  ELWKDAVDSGISPNAATYTVLINGLCKMQMLSIAKGLFNKKRASGTRPTVSEYNTLMASL 526

Query: 889  CKNXXXXXXXXXXXXXXXXXXXANVFVYSALISAFCNKGEIERGKQLFDEMLGKNVTPNV 1068
            C+                     +V  ++ +I      G++E  K+L  EML  N+ P+ 
Sbjct: 527  CRESSVEQARNLFQEMRNANHDPDVVSFNIIIDGTLKAGDVESAKELLLEMLNMNLVPDN 586

Query: 1069 VTYSCLMHALCKTGKWQEASQMLNDMTTSRVHPDVVAYTVLADGLCKNGRASDAVKVLDL 1248
            +T+S L++   K G+  EA+ +   M +    PD V +  L  G    G+    V +L  
Sbjct: 587  ITFSILINRFLKLGQLDEAASLYERMVSCGHVPDAVLFDSLLKGYSLKGKTEKVVSMLQQ 646

Query: 1249 MVQKGEEPNTLTYNAVINGLCKEGRVDDALKILEMMAKKGKKPDVVTYNTLLKGL 1413
            M  K    ++   + ++  LC   +  D  KIL   ++       +  N LL  L
Sbjct: 647  MADKDVVLDSKLTSTILACLCNMSKDVDIEKILPKFSQHTSVGASIKCNELLMKL 701



 Score = 92.4 bits (228), Expect = 4e-16
 Identities = 79/356 (22%), Positives = 144/356 (40%), Gaps = 1/356 (0%)
 Frame = +1

Query: 376  LTEAVSLFHRAVEDPDSV-PSVPACNSLIHNLRKARHYDLVVSVYSKMAGACVLPSFTSL 552
            + EAV L +  +     + P V A N +I  L K R       VY  M       +  + 
Sbjct: 390  IDEAVDLLNLLMSKEFHIKPDVFAFNLVIQELCKQRRLRHAKRVYYTMVERGFPSNIVTY 449

Query: 553  SALVESFVNTHKPKFAFGVLGLMIKHGFEVNVYNVNLVLKGFCQSGDCDKAMGLFCQMKR 732
            + L++ +++  K   A  +    +  G   N     +++ G C+      A GLF + + 
Sbjct: 450  NILIDGYLSAGKLTKALELWKDAVDSGISPNAATYTVLINGLCKMQMLSIAKGLFNKKRA 509

Query: 733  NCVLPDSISYNTIVNGLCKAKRSVEARDLFEAMKAGDCKPNLVTFSALIDGLCKNXXXXX 912
            +   P    YNT++  LC+     +AR+LF+ M+  +  P++V+F+ +IDG  K      
Sbjct: 510  SGTRPTVSEYNTLMASLCRESSVEQARNLFQEMRNANHDPDVVSFNIIIDGTLKAGDVES 569

Query: 913  XXXXXXXXXXXXXXANVFVYSALISAFCNKGEIERGKQLFDEMLGKNVTPNVVTYSCLMH 1092
                           +   +S LI+ F   G+++    L++ M+     P+ V +  L+ 
Sbjct: 570  AKELLLEMLNMNLVPDNITFSILINRFLKLGQLDEAASLYERMVSCGHVPDAVLFDSLLK 629

Query: 1093 ALCKTGKWQEASQMLNDMTTSRVHPDVVAYTVLADGLCKNGRASDAVKVLDLMVQKGEEP 1272
                 GK ++   ML  M    V  D    + +   LC   +  D  K+L    Q     
Sbjct: 630  GYSLKGKTEKVVSMLQQMADKDVVLDSKLTSTILACLCNMSKDVDIEKILPKFSQHTSVG 689

Query: 1273 NTLTYNAVINGLCKEGRVDDALKILEMMAKKGKKPDVVTYNTLLKGLAGVGKIEEA 1440
             ++  N ++  L K    D+A  ++   A    K  +      +  ++ V +IEEA
Sbjct: 690  ASIKCNELLMKLNKV-HPDNANILVANTAMGTGKVKIYGARVRVDSMSKVAEIEEA 744


>ref|XP_003530271.1| PREDICTED: pentatricopeptide repeat-containing protein At4g28010-like
            [Glycine max]
          Length = 703

 Score =  688 bits (1775), Expect = 0.0
 Identities = 352/535 (65%), Positives = 410/535 (76%), Gaps = 4/535 (0%)
 Frame = +1

Query: 265  MIPKRLLNPPRSTFFIPTNVCPFHVXXXXXXXXXXXXLTEAVSLFHRAVE-DPDSVPSVP 441
            MIPKRLLN   S      +                  L++AVSLFHR ++ DP S PS P
Sbjct: 1    MIPKRLLNNSSSIAHTQPH-----------------SLSDAVSLFHRTIDNDPTSPPSEP 43

Query: 442  ACNSLIHNLRKARHYDLVVSVYSKMAGACVLPSFTSLSALVESFVNTHKPKFAFGVLGLM 621
            AC++LI NLRKAR YD VVSVY KM  A VLP FTSLSAL ESFVNTH P FAF VL LM
Sbjct: 44   ACSTLIDNLRKARQYDAVVSVYHKMVSALVLPRFTSLSALTESFVNTHHPSFAFSVLSLM 103

Query: 622  IKHGFEVNVYNVNLVLKGFCQSGDCDKAMGLFCQMKRN--CVLPDSISYNTIVNGLCKAK 795
             K GF VNVYN+NLVLKGFC+SG CDKAM LF QMKRN  CV+PD ++YNT+VNG CKAK
Sbjct: 104  TKRGFGVNVYNLNLVLKGFCRSGQCDKAMSLFSQMKRNYDCVVPDCVTYNTLVNGFCKAK 163

Query: 796  RSVEARDLFEAMK-AGDCKPNLVTFSALIDGLCKNXXXXXXXXXXXXXXXXXXXANVFVY 972
            R  EAR LFEAMK  GDC+PNLVT+S LID  CK+                   A+VFVY
Sbjct: 164  RLAEARVLFEAMKKGGDCRPNLVTYSVLIDCYCKSGEVGEGLGLLEEMEREGLKADVFVY 223

Query: 973  SALISAFCNKGEIERGKQLFDEMLGKNVTPNVVTYSCLMHALCKTGKWQEASQMLNDMTT 1152
            S+LISAFC +G+IE G++LFDEML + V+PNVVTYSCLM  L +TG+W+EAS+ML DMT 
Sbjct: 224  SSLISAFCGEGDIETGRELFDEMLRRKVSPNVVTYSCLMQGLGRTGRWREASEMLKDMTA 283

Query: 1153 SRVHPDVVAYTVLADGLCKNGRASDAVKVLDLMVQKGEEPNTLTYNAVINGLCKEGRVDD 1332
              V PDVVAYTVLADGLCKNGRA DA+KVLDLMVQKGEEP TLTYN V+NGLCKE R+DD
Sbjct: 284  RGVRPDVVAYTVLADGLCKNGRAGDAIKVLDLMVQKGEEPGTLTYNVVVNGLCKEDRMDD 343

Query: 1333 ALKILEMMAKKGKKPDVVTYNTLLKGLAGVGKIEEAMELWELLLSKEFHIKPDVFTLNFL 1512
            A  ++EMM KKGKKPD VTYNTLLKGL G GKI EAM+LW+LLLS++FH+KPDVFT N L
Sbjct: 344  AFGVVEMMVKKGKKPDAVTYNTLLKGLCGAGKIHEAMDLWKLLLSEKFHVKPDVFTCNNL 403

Query: 1513 IQGLCKERRLGDAVRIYSTMVQRGFQVNIVTYNILIDGYLNAGKITKALELWKYAVDLGF 1692
            IQGLCKE R+ DA RI+S+MV+ G Q NIVTYN LI+GYL A K+ +AL+LWKYAV+ GF
Sbjct: 404  IQGLCKEGRVHDAARIHSSMVEMGLQGNIVTYNFLIEGYLAARKLIEALKLWKYAVESGF 463

Query: 1693 SPNSVTCTILIDGLCRMQMLRMAKGLFNKKRASGVRPTVIEYNALMASLCRESSL 1857
            SPNS+T +++I+GLC+MQML +A+GLF K + SG+RPTVI+YNALM SLCRE SL
Sbjct: 464  SPNSMTYSVMINGLCKMQMLSVARGLFCKMKDSGIRPTVIDYNALMTSLCREDSL 518



 Score =  182 bits (463), Expect = 2e-43
 Identities = 126/491 (25%), Positives = 221/491 (45%), Gaps = 41/491 (8%)
 Frame = +1

Query: 382  EAVSLFHRAVEDPDSVPSVPAC---NSLIHNLRKARHYDLVVSVYSKMA-GACVLPSFTS 549
            +A+SLF +   + D V  VP C   N+L++   KA+       ++  M  G    P+  +
Sbjct: 130  KAMSLFSQMKRNYDCV--VPDCVTYNTLVNGFCKAKRLAEARVLFEAMKKGGDCRPNLVT 187

Query: 550  LSALVESFVNTHKPKFAFGVLGLMIKHGFEVNVYNVNLVLKGFCQSGDCDKAMGLFCQMK 729
             S L++ +  + +     G+L  M + G + +V+  + ++  FC  GD +    LF +M 
Sbjct: 188  YSVLIDCYCKSGEVGEGLGLLEEMEREGLKADVFVYSSLISAFCGEGDIETGRELFDEML 247

Query: 730  RNCVLPDSISYNTIVNGLCKAKRSVEARDLFEAMKAGDCKPNLVTFSALIDGLCKNXXXX 909
            R  V P+ ++Y+ ++ GL +  R  EA ++ + M A   +P++V ++ L DGLCKN    
Sbjct: 248  RRKVSPNVVTYSCLMQGLGRTGRWREASEMLKDMTARGVRPDVVAYTVLADGLCKNGRAG 307

Query: 910  XXXXXXXXXXXXXXXANVFVYSALISAFCNKGEIERGKQLFDEMLGKNVTPNVVTYSCLM 1089
                                Y+ +++  C +  ++    + + M+ K   P+ VTY+ L+
Sbjct: 308  DAIKVLDLMVQKGEEPGTLTYNVVVNGLCKEDRMDDAFGVVEMMVKKGKKPDAVTYNTLL 367

Query: 1090 HALCKTGKWQEASQMLNDMTTSRVH--PDVVAYTVLADGLCKNGRASDAVKVLDLMVQKG 1263
              LC  GK  EA  +   + + + H  PDV     L  GLCK GR  DA ++   MV+ G
Sbjct: 368  KGLCGAGKIHEAMDLWKLLLSEKFHVKPDVFTCNNLIQGLCKEGRVHDAARIHSSMVEMG 427

Query: 1264 EE-----------------------------------PNTLTYNAVINGLCKEGRVDDAL 1338
             +                                   PN++TY+ +INGLCK   +  A 
Sbjct: 428  LQGNIVTYNFLIEGYLAARKLIEALKLWKYAVESGFSPNSMTYSVMINGLCKMQMLSVAR 487

Query: 1339 KILEMMAKKGKKPDVVTYNTLLKGLAGVGKIEEAMELWELLLSKEFHIKPDVFTLNFLIQ 1518
             +   M   G +P V+ YN L+  L     +E+A  L++ + +   ++  DV + N +I 
Sbjct: 488  GLFCKMKDSGIRPTVIDYNALMTSLCREDSLEQARSLFQEMRNVNHNV--DVVSFNIIID 545

Query: 1519 GLCKERRLGDAVRIYSTMVQRGFQVNIVTYNILIDGYLNAGKITKALELWKYAVDLGFSP 1698
            G  K   +  A  + S M       + VT++ILI+ +   G + +A+ L++  V  G  P
Sbjct: 546  GTLKAGDVKSAKELLSEMFMMDLVPDAVTFSILINRFSKLGMLDEAMGLYEKMVSCGHVP 605

Query: 1699 NSVTCTILIDG 1731
              V    L+ G
Sbjct: 606  GVVVFDSLLKG 616



 Score =  142 bits (357), Expect = 4e-31
 Identities = 99/386 (25%), Positives = 171/386 (44%), Gaps = 2/386 (0%)
 Frame = +1

Query: 430  PSVPACNSLIHNLRKARHYDLVVSVYSKMAGACVLPSFTSLSALVESFVNTHKPKFAFGV 609
            P V A   L   L K       + V   M      P   + + +V       +   AFGV
Sbjct: 288  PDVVAYTVLADGLCKNGRAGDAIKVLDLMVQKGEEPGTLTYNVVVNGLCKEDRMDDAFGV 347

Query: 610  LGLMIKHGFEVNVYNVNLVLKGFCQSGDCDKAMGLFCQM--KRNCVLPDSISYNTIVNGL 783
            + +M+K G + +    N +LKG C +G   +AM L+  +  ++  V PD  + N ++ GL
Sbjct: 348  VEMMVKKGKKPDAVTYNTLLKGLCGAGKIHEAMDLWKLLLSEKFHVKPDVFTCNNLIQGL 407

Query: 784  CKAKRSVEARDLFEAMKAGDCKPNLVTFSALIDGLCKNXXXXXXXXXXXXXXXXXXXANV 963
            CK  R  +A  +  +M     + N+VT++ LI+G                        N 
Sbjct: 408  CKEGRVHDAARIHSSMVEMGLQGNIVTYNFLIEGYLAARKLIEALKLWKYAVESGFSPNS 467

Query: 964  FVYSALISAFCNKGEIERGKQLFDEMLGKNVTPNVVTYSCLMHALCKTGKWQEASQMLND 1143
              YS +I+  C    +   + LF +M    + P V+ Y+ LM +LC+    ++A  +  +
Sbjct: 468  MTYSVMINGLCKMQMLSVARGLFCKMKDSGIRPTVIDYNALMTSLCREDSLEQARSLFQE 527

Query: 1144 MTTSRVHPDVVAYTVLADGLCKNGRASDAVKVLDLMVQKGEEPNTLTYNAVINGLCKEGR 1323
            M     + DVV++ ++ DG  K G    A ++L  M      P+ +T++ +IN   K G 
Sbjct: 528  MRNVNHNVDVVSFNIIIDGTLKAGDVKSAKELLSEMFMMDLVPDAVTFSILINRFSKLGM 587

Query: 1324 VDDALKILEMMAKKGKKPDVVTYNTLLKGLAGVGKIEEAMELWELLLSKEFHIKPDVFTL 1503
            +D+A+ + E M   G  P VV +++LLKG    G+ E+ + L   +  K+  +  D    
Sbjct: 588  LDEAMGLYEKMVSCGHVPGVVVFDSLLKGYGLKGETEKIISLLHQMADKD--VVLDSKLT 645

Query: 1504 NFLIQGLCKERRLGDAVRIYSTMVQR 1581
            + ++  LC   R  D  +I     Q+
Sbjct: 646  STILACLCHMSRNLDVEKILPKFSQQ 671



 Score =  104 bits (260), Expect = 7e-20
 Identities = 78/331 (23%), Positives = 139/331 (41%), Gaps = 1/331 (0%)
 Frame = +1

Query: 382  EAVSLFHRAVEDPDSV-PSVPACNSLIHNLRKARHYDLVVSVYSKMAGACVLPSFTSLSA 558
            EA+ L+   + +   V P V  CN+LI  L K         ++S M    +  +  + + 
Sbjct: 378  EAMDLWKLLLSEKFHVKPDVFTCNNLIQGLCKEGRVHDAARIHSSMVEMGLQGNIVTYNF 437

Query: 559  LVESFVNTHKPKFAFGVLGLMIKHGFEVNVYNVNLVLKGFCQSGDCDKAMGLFCQMKRNC 738
            L+E ++   K   A  +    ++ GF  N    ++++ G C+      A GLFC+MK + 
Sbjct: 438  LIEGYLAARKLIEALKLWKYAVESGFSPNSMTYSVMINGLCKMQMLSVARGLFCKMKDSG 497

Query: 739  VLPDSISYNTIVNGLCKAKRSVEARDLFEAMKAGDCKPNLVTFSALIDGLCKNXXXXXXX 918
            + P  I YN ++  LC+     +AR LF+ M+  +   ++V+F+ +IDG  K        
Sbjct: 498  IRPTVIDYNALMTSLCREDSLEQARSLFQEMRNVNHNVDVVSFNIIIDGTLK-------- 549

Query: 919  XXXXXXXXXXXXANVFVYSALISAFCNKGEIERGKQLFDEMLGKNVTPNVVTYSCLMHAL 1098
                                        G+++  K+L  EM   ++ P+ VT+S L++  
Sbjct: 550  ---------------------------AGDVKSAKELLSEMFMMDLVPDAVTFSILINRF 582

Query: 1099 CKTGKWQEASQMLNDMTTSRVHPDVVAYTVLADGLCKNGRASDAVKVLDLMVQKGEEPNT 1278
             K G   EA  +   M +    P VV +  L  G    G     + +L  M  K    ++
Sbjct: 583  SKLGMLDEAMGLYEKMVSCGHVPGVVVFDSLLKGYGLKGETEKIISLLHQMADKDVVLDS 642

Query: 1279 LTYNAVINGLCKEGRVDDALKILEMMAKKGK 1371
               + ++  LC   R  D  KIL   +++ +
Sbjct: 643  KLTSTILACLCHMSRNLDVEKILPKFSQQSE 673


>ref|XP_002276327.1| PREDICTED: pentatricopeptide repeat-containing protein At4g28010-like
            [Vitis vinifera]
          Length = 728

 Score =  533 bits (1374), Expect = e-149
 Identities = 267/493 (54%), Positives = 351/493 (71%)
 Frame = +1

Query: 379  TEAVSLFHRAVEDPDSVPSVPACNSLIHNLRKARHYDLVVSVYSKMAGACVLPSFTSLSA 558
            TEAVSLFH A+ D + +PS   CN L+  L ++R+Y L  SVY +M    VLPSF SLSA
Sbjct: 56   TEAVSLFHSAL-DFNLLPSWATCNFLVDALARSRNYGLAFSVYRRMTHVDVLPSFGSLSA 114

Query: 559  LVESFVNTHKPKFAFGVLGLMIKHGFEVNVYNVNLVLKGFCQSGDCDKAMGLFCQMKRNC 738
            L+E F +  KP+  FGV+GL++K GF VNV+ +N+VLKG C++G   +AMGL  +M R  
Sbjct: 115  LIECFADAQKPQLGFGVVGLVLKRGFTVNVFIMNIVLKGLCRNGGVFEAMGLIREMGRKS 174

Query: 739  VLPDSISYNTIVNGLCKAKRSVEARDLFEAMKAGDCKPNLVTFSALIDGLCKNXXXXXXX 918
            V PD +SYNT++NGLCKAK+  EA  L   M+A  C PN VT + L+DGLCK+       
Sbjct: 175  VSPDIVSYNTLINGLCKAKKLKEAVGLLLEMEAAGCFPNSVTCTTLMDGLCKDGRMDEAM 234

Query: 919  XXXXXXXXXXXXANVFVYSALISAFCNKGEIERGKQLFDEMLGKNVTPNVVTYSCLMHAL 1098
                        A+V +Y  LIS FCN G ++RGK+LFDEMLGK ++ NVVTYSCL+H L
Sbjct: 235  ELLEAMKKKGFDADVVLYGTLISGFCNNGNLDRGKELFDEMLGKGISANVVTYSCLVHGL 294

Query: 1099 CKTGKWQEASQMLNDMTTSRVHPDVVAYTVLADGLCKNGRASDAVKVLDLMVQKGEEPNT 1278
            C+ G+W+EA+ +LN M    +HPDVV YT L DGLCK+GRA+ A+ +L+LMV+KGEEP+ 
Sbjct: 295  CRLGQWKEANTVLNAMAEHGIHPDVVTYTGLIDGLCKDGRATHAMDLLNLMVEKGEEPSN 354

Query: 1279 LTYNAVINGLCKEGRVDDALKILEMMAKKGKKPDVVTYNTLLKGLAGVGKIEEAMELWEL 1458
            +TYN +++GLCKEG V DA KIL MM +KGKK DVVTYNTL+KGL   GK++EA++L+  
Sbjct: 355  VTYNVLLSGLCKEGLVIDAFKILRMMIEKGKKADVVTYNTLMKGLCDKGKVDEALKLFNS 414

Query: 1459 LLSKEFHIKPDVFTLNFLIQGLCKERRLGDAVRIYSTMVQRGFQVNIVTYNILIDGYLNA 1638
            +   E  ++P+VFT N LI GLCKE RL  AV+I+  MV++G   N+VTYN+L+ G L A
Sbjct: 415  MFDNENCLEPNVFTFNMLIGGLCKEGRLTKAVKIHRKMVKKGSCGNLVTYNMLLGGCLKA 474

Query: 1639 GKITKALELWKYAVDLGFSPNSVTCTILIDGLCRMQMLRMAKGLFNKKRASGVRPTVIEY 1818
            GKI +A+ELWK  +DLGF PNS T +ILIDG C+M+ML +AKGLF + R  G+ P + +Y
Sbjct: 475  GKIKEAMELWKQVLDLGFVPNSFTYSILIDGFCKMRMLNIAKGLFCEMRTHGLNPALFDY 534

Query: 1819 NALMASLCRESSL 1857
            N LMASLC+E SL
Sbjct: 535  NTLMASLCKEGSL 547



 Score =  167 bits (423), Expect = 9e-39
 Identities = 112/386 (29%), Positives = 177/386 (45%), Gaps = 3/386 (0%)
 Frame = +1

Query: 430  PSVPACNSLIHNLRKARHYDLVVSVYSKMAGACVLPSFTSLSALVESFVNTHKPKFAFGV 609
            P V     LI  L K       + + + M      PS  + + L+           AF +
Sbjct: 317  PDVVTYTGLIDGLCKDGRATHAMDLLNLMVEKGEEPSNVTYNVLLSGLCKEGLVIDAFKI 376

Query: 610  LGLMIKHGFEVNVYNVNLVLKGFCQSGDCDKAMGLFCQM--KRNCVLPDSISYNTIVNGL 783
            L +MI+ G + +V   N ++KG C  G  D+A+ LF  M    NC+ P+  ++N ++ GL
Sbjct: 377  LRMMIEKGKKADVVTYNTLMKGLCDKGKVDEALKLFNSMFDNENCLEPNVFTFNMLIGGL 436

Query: 784  CKAKRSVEARDLFEAM-KAGDCKPNLVTFSALIDGLCKNXXXXXXXXXXXXXXXXXXXAN 960
            CK  R  +A  +   M K G C  NLVT++ L+ G  K                     N
Sbjct: 437  CKEGRLTKAVKIHRKMVKKGSCG-NLVTYNMLLGGCLKAGKIKEAMELWKQVLDLGFVPN 495

Query: 961  VFVYSALISAFCNKGEIERGKQLFDEMLGKNVTPNVVTYSCLMHALCKTGKWQEASQMLN 1140
             F YS LI  FC    +   K LF EM    + P +  Y+ LM +LCK G  ++A  +  
Sbjct: 496  SFTYSILIDGFCKMRMLNIAKGLFCEMRTHGLNPALFDYNTLMASLCKEGSLEQAKSLFQ 555

Query: 1141 DMTTSRVHPDVVAYTVLADGLCKNGRASDAVKVLDLMVQKGEEPNTLTYNAVINGLCKEG 1320
            +M  +   PD++++  + DG  K G      ++   MV+ G  P+ LT++ +IN L K G
Sbjct: 556  EMGNANCEPDIISFNTMIDGTLKAGDFQFVKELQMKMVEMGLRPDALTFSTLINRLSKLG 615

Query: 1321 RVDDALKILEMMAKKGKKPDVVTYNTLLKGLAGVGKIEEAMELWELLLSKEFHIKPDVFT 1500
             +D+A   LE M   G  PD + Y++LLKGL+  G   E + L   + +K   +  D   
Sbjct: 616  ELDEAKSALERMVASGFTPDALVYDSLLKGLSSKGDTTEIINLLHQMAAKGTVL--DRKI 673

Query: 1501 LNFLIQGLCKERRLGDAVRIYSTMVQ 1578
            ++ ++  LC   +  D + +  T  Q
Sbjct: 674  VSTILTCLCHSIQEVDVMELLPTFFQ 699



 Score =  116 bits (290), Expect = 2e-23
 Identities = 83/345 (24%), Positives = 153/345 (44%), Gaps = 1/345 (0%)
 Frame = +1

Query: 382  EAVSLFHRAVEDPDSV-PSVPACNSLIHNLRKARHYDLVVSVYSKMAGACVLPSFTSLSA 558
            EA+ LF+   ++ + + P+V   N LI  L K       V ++ KM       +  + + 
Sbjct: 407  EALKLFNSMFDNENCLEPNVFTFNMLIGGLCKEGRLTKAVKIHRKMVKKGSCGNLVTYNM 466

Query: 559  LVESFVNTHKPKFAFGVLGLMIKHGFEVNVYNVNLVLKGFCQSGDCDKAMGLFCQMKRNC 738
            L+   +   K K A  +   ++  GF  N +  ++++ GFC+    + A GLFC+M+ + 
Sbjct: 467  LLGGCLKAGKIKEAMELWKQVLDLGFVPNSFTYSILIDGFCKMRMLNIAKGLFCEMRTHG 526

Query: 739  VLPDSISYNTIVNGLCKAKRSVEARDLFEAMKAGDCKPNLVTFSALIDGLCKNXXXXXXX 918
            + P    YNT++  LCK     +A+ LF+ M   +C+P++++F+ +IDG  K        
Sbjct: 527  LNPALFDYNTLMASLCKEGSLEQAKSLFQEMGNANCEPDIISFNTMIDGTLK-------- 578

Query: 919  XXXXXXXXXXXXANVFVYSALISAFCNKGEIERGKQLFDEMLGKNVTPNVVTYSCLMHAL 1098
                                        G+ +  K+L  +M+   + P+ +T+S L++ L
Sbjct: 579  ---------------------------AGDFQFVKELQMKMVEMGLRPDALTFSTLINRL 611

Query: 1099 CKTGKWQEASQMLNDMTTSRVHPDVVAYTVLADGLCKNGRASDAVKVLDLMVQKGEEPNT 1278
             K G+  EA   L  M  S   PD + Y  L  GL   G  ++ + +L  M  KG   + 
Sbjct: 612  SKLGELDEAKSALERMVASGFTPDALVYDSLLKGLSSKGDTTEIINLLHQMAAKGTVLDR 671

Query: 1279 LTYNAVINGLCKEGRVDDALKILEMMAKKGKKPDVVTYNTLLKGL 1413
               + ++  LC   +  D +++L    +   +   ++ N LL  L
Sbjct: 672  KIVSTILTCLCHSIQEVDVMELLPTFFQGTSEGASISCNELLMQL 716



 Score = 97.4 bits (241), Expect = 1e-17
 Identities = 75/311 (24%), Positives = 129/311 (41%), Gaps = 37/311 (11%)
 Frame = +1

Query: 1027 LFDEMLGKNVTPNVVTYSCLMHALCK--TGKWQEASQMLNDMTTSRVHPDVVAYTVLADG 1200
            LF   +   ++PN +     + +LC+    ++ EA  + +      + P       L D 
Sbjct: 26   LFSSSIPIPISPNDLETQ--LRSLCQKPNSQFTEAVSLFHSALDFNLLPSWATCNFLVDA 83

Query: 1201 LCKNGRASDAVKVLDLMVQKGEEPNTLTYNAVINGLCKEGRVDDALKILEMMAKKGKKPD 1380
            L ++     A  V   M      P+  + +A+I       +      ++ ++ K+G   +
Sbjct: 84   LARSRNYGLAFSVYRRMTHVDVLPSFGSLSALIECFADAQKPQLGFGVVGLVLKRGFTVN 143

Query: 1381 VVTYNTLLKGLAGVGKIEEAMELWELLLSKEFHIKPDVFTLNFLIQGLCKERRLGDAV-- 1554
            V   N +LKGL   G + EAM L   +  K   + PD+ + N LI GLCK ++L +AV  
Sbjct: 144  VFIMNIVLKGLCRNGGVFEAMGLIREMGRKS--VSPDIVSYNTLINGLCKAKKLKEAVGL 201

Query: 1555 ---------------------------------RIYSTMVQRGFQVNIVTYNILIDGYLN 1635
                                              +   M ++GF  ++V Y  LI G+ N
Sbjct: 202  LLEMEAAGCFPNSVTCTTLMDGLCKDGRMDEAMELLEAMKKKGFDADVVLYGTLISGFCN 261

Query: 1636 AGKITKALELWKYAVDLGFSPNSVTCTILIDGLCRMQMLRMAKGLFNKKRASGVRPTVIE 1815
             G + +  EL+   +  G S N VT + L+ GLCR+   + A  + N     G+ P V+ 
Sbjct: 262  NGNLDRGKELFDEMLGKGISANVVTYSCLVHGLCRLGQWKEANTVLNAMAEHGIHPDVVT 321

Query: 1816 YNALMASLCRE 1848
            Y  L+  LC++
Sbjct: 322  YTGLIDGLCKD 332



 Score = 83.2 bits (204), Expect = 2e-13
 Identities = 67/308 (21%), Positives = 124/308 (40%)
 Frame = +1

Query: 376  LTEAVSLFHRAVEDPDSVPSVPACNSLIHNLRKARHYDLVVSVYSKMAGACVLPSFTSLS 555
            LT+AV + HR +    S  ++   N L+    KA      + ++ ++     +P+  + S
Sbjct: 442  LTKAVKI-HRKMVKKGSCGNLVTYNMLLGGCLKAGKIKEAMELWKQVLDLGFVPNSFTYS 500

Query: 556  ALVESFVNTHKPKFAFGVLGLMIKHGFEVNVYNVNLVLKGFCQSGDCDKAMGLFCQMKRN 735
             L++ F        A G+   M  HG    +++ N ++   C+ G  ++A  LF +M   
Sbjct: 501  ILIDGFCKMRMLNIAKGLFCEMRTHGLNPALFDYNTLMASLCKEGSLEQAKSLFQEMGNA 560

Query: 736  CVLPDSISYNTIVNGLCKAKRSVEARDLFEAMKAGDCKPNLVTFSALIDGLCKNXXXXXX 915
               PD IS+NT+++G  KA      ++L   M     +P+ +TFS LI+ L K       
Sbjct: 561  NCEPDIISFNTMIDGTLKAGDFQFVKELQMKMVEMGLRPDALTFSTLINRLSK------- 613

Query: 916  XXXXXXXXXXXXXANVFVYSALISAFCNKGEIERGKQLFDEMLGKNVTPNVVTYSCLMHA 1095
                                         GE++  K   + M+    TP+ + Y  L+  
Sbjct: 614  ----------------------------LGELDEAKSALERMVASGFTPDALVYDSLLKG 645

Query: 1096 LCKTGKWQEASQMLNDMTTSRVHPDVVAYTVLADGLCKNGRASDAVKVLDLMVQKGEEPN 1275
            L   G   E   +L+ M       D    + +   LC + +  D +++L    Q   E  
Sbjct: 646  LSSKGDTTEIINLLHQMAAKGTVLDRKIVSTILTCLCHSIQEVDVMELLPTFFQGTSEGA 705

Query: 1276 TLTYNAVI 1299
            +++ N ++
Sbjct: 706  SISCNELL 713


>emb|CBI24253.3| unnamed protein product [Vitis vinifera]
          Length = 582

 Score =  447 bits (1149), Expect = e-123
 Identities = 219/401 (54%), Positives = 288/401 (71%)
 Frame = +1

Query: 655  VNLVLKGFCQSGDCDKAMGLFCQMKRNCVLPDSISYNTIVNGLCKAKRSVEARDLFEAMK 834
            +N+VLKG C++G   +AMGL  +M R  V PD +SYNT++NGLCKAK+  EA  L   M+
Sbjct: 1    MNIVLKGLCRNGGVFEAMGLIREMGRKSVSPDIVSYNTLINGLCKAKKLKEAVGLLLEME 60

Query: 835  AGDCKPNLVTFSALIDGLCKNXXXXXXXXXXXXXXXXXXXANVFVYSALISAFCNKGEIE 1014
            A  C PN VT + L+DGLCK+                   A+V +Y  LIS FCN G ++
Sbjct: 61   AAGCFPNSVTCTTLMDGLCKDGRMDEAMELLEAMKKKGFDADVVLYGTLISGFCNNGNLD 120

Query: 1015 RGKQLFDEMLGKNVTPNVVTYSCLMHALCKTGKWQEASQMLNDMTTSRVHPDVVAYTVLA 1194
            RGK+LFDEMLGK ++ NVVTYSCL+H LC+ G+W+EA+ +LN M    +HPDVV YT L 
Sbjct: 121  RGKELFDEMLGKGISANVVTYSCLVHGLCRLGQWKEANTVLNAMAEHGIHPDVVTYTGLI 180

Query: 1195 DGLCKNGRASDAVKVLDLMVQKGEEPNTLTYNAVINGLCKEGRVDDALKILEMMAKKGKK 1374
            DGLCK+GRA+ A+ +L+LMV+KGEEP+ +TYN +++GLCKEG V DA KIL MM +KGKK
Sbjct: 181  DGLCKDGRATHAMDLLNLMVEKGEEPSNVTYNVLLSGLCKEGLVIDAFKILRMMIEKGKK 240

Query: 1375 PDVVTYNTLLKGLAGVGKIEEAMELWELLLSKEFHIKPDVFTLNFLIQGLCKERRLGDAV 1554
             DVVTYNTL+KGL   GK++EA++L+  +   E  ++P+VFT N LI GLCKE RL  AV
Sbjct: 241  ADVVTYNTLMKGLCDKGKVDEALKLFNSMFDNENCLEPNVFTFNMLIGGLCKEGRLTKAV 300

Query: 1555 RIYSTMVQRGFQVNIVTYNILIDGYLNAGKITKALELWKYAVDLGFSPNSVTCTILIDGL 1734
            +I+  MV++G   N+VTYN+L+ G L AGKI +A+ELWK  +DLGF PNS T +ILIDG 
Sbjct: 301  KIHRKMVKKGSCGNLVTYNMLLGGCLKAGKIKEAMELWKQVLDLGFVPNSFTYSILIDGF 360

Query: 1735 CRMQMLRMAKGLFNKKRASGVRPTVIEYNALMASLCRESSL 1857
            C+M+ML +AKGLF + R  G+ P + +YN LMASLC+E SL
Sbjct: 361  CKMRMLNIAKGLFCEMRTHGLNPALFDYNTLMASLCKEGSL 401



 Score =  227 bits (579), Expect = 7e-57
 Identities = 147/478 (30%), Positives = 216/478 (45%), Gaps = 35/478 (7%)
 Frame = +1

Query: 511  KMAGACVLPSFTSLSALVESFVNTHKPKFAFGVLGLMIKHGFEVNVYNVNLVLKGFCQSG 690
            +M    V P   S + L+       K K A G+L  M   G   N      ++ G C+ G
Sbjct: 23   EMGRKSVSPDIVSYNTLINGLCKAKKLKEAVGLLLEMEAAGCFPNSVTCTTLMDGLCKDG 82

Query: 691  DCDKAMGLFCQMKRNCVLPDSISYNTIVNGLCKAKRSVEARDLFEAMKAGDCKPNLVTFS 870
              D+AM L   MK+     D + Y T+++G C        ++LF+ M       N+VT+S
Sbjct: 83   RMDEAMELLEAMKKKGFDADVVLYGTLISGFCNNGNLDRGKELFDEMLGKGISANVVTYS 142

Query: 871  ALIDGLCKNXXXXXXXXXXXXXXXXXXXANVFVYSALISAFCNKGEIERGKQLFDEMLGK 1050
             L+ GLC+                     +V  Y+ LI   C  G       L + M+ K
Sbjct: 143  CLVHGLCRLGQWKEANTVLNAMAEHGIHPDVVTYTGLIDGLCKDGRATHAMDLLNLMVEK 202

Query: 1051 NVTPNVVTYSCLMHALCKTGKWQEASQMLNDMTTSRVHPDVVAYTVLADGLCKNGRASDA 1230
               P+ VTY+ L+  LCK G   +A ++L  M       DVV Y  L  GLC  G+  +A
Sbjct: 203  GEEPSNVTYNVLLSGLCKEGLVIDAFKILRMMIEKGKKADVVTYNTLMKGLCDKGKVDEA 262

Query: 1231 VKVLDLMVQKGE--EPNTLTYNAVINGLCKEGRVDDALKILEMMAKKGKKPDVVTYNTLL 1404
            +K+ + M       EPN  T+N +I GLCKEGR+  A+KI   M KKG   ++VTYN LL
Sbjct: 263  LKLFNSMFDNENCLEPNVFTFNMLIGGLCKEGRLTKAVKIHRKMVKKGSCGNLVTYNMLL 322

Query: 1405 KGLAGVGKIEEAMELWELLLSKEF---------------------------------HIK 1485
             G    GKI+EAMELW+ +L   F                                  + 
Sbjct: 323  GGCLKAGKIKEAMELWKQVLDLGFVPNSFTYSILIDGFCKMRMLNIAKGLFCEMRTHGLN 382

Query: 1486 PDVFTLNFLIQGLCKERRLGDAVRIYSTMVQRGFQVNIVTYNILIDGYLNAGKITKALEL 1665
            P +F  N L+  LCKE  L  A  ++  M     + +I+++N +IDG L AG      EL
Sbjct: 383  PALFDYNTLMASLCKEGSLEQAKSLFQEMGNANCEPDIISFNTMIDGTLKAGDFQFVKEL 442

Query: 1666 WKYAVDLGFSPNSVTCTILIDGLCRMQMLRMAKGLFNKKRASGVRPTVIEYNALMASL 1839
                V++G  P+++T + LI+ L ++  L  AK    +  ASG  P  + Y++L+  L
Sbjct: 443  QMKMVEMGLRPDALTFSTLINRLSKLGELDEAKSALERMVASGFTPDALVYDSLLKGL 500



 Score =  167 bits (423), Expect = 9e-39
 Identities = 112/386 (29%), Positives = 177/386 (45%), Gaps = 3/386 (0%)
 Frame = +1

Query: 430  PSVPACNSLIHNLRKARHYDLVVSVYSKMAGACVLPSFTSLSALVESFVNTHKPKFAFGV 609
            P V     LI  L K       + + + M      PS  + + L+           AF +
Sbjct: 171  PDVVTYTGLIDGLCKDGRATHAMDLLNLMVEKGEEPSNVTYNVLLSGLCKEGLVIDAFKI 230

Query: 610  LGLMIKHGFEVNVYNVNLVLKGFCQSGDCDKAMGLFCQM--KRNCVLPDSISYNTIVNGL 783
            L +MI+ G + +V   N ++KG C  G  D+A+ LF  M    NC+ P+  ++N ++ GL
Sbjct: 231  LRMMIEKGKKADVVTYNTLMKGLCDKGKVDEALKLFNSMFDNENCLEPNVFTFNMLIGGL 290

Query: 784  CKAKRSVEARDLFEAM-KAGDCKPNLVTFSALIDGLCKNXXXXXXXXXXXXXXXXXXXAN 960
            CK  R  +A  +   M K G C  NLVT++ L+ G  K                     N
Sbjct: 291  CKEGRLTKAVKIHRKMVKKGSCG-NLVTYNMLLGGCLKAGKIKEAMELWKQVLDLGFVPN 349

Query: 961  VFVYSALISAFCNKGEIERGKQLFDEMLGKNVTPNVVTYSCLMHALCKTGKWQEASQMLN 1140
             F YS LI  FC    +   K LF EM    + P +  Y+ LM +LCK G  ++A  +  
Sbjct: 350  SFTYSILIDGFCKMRMLNIAKGLFCEMRTHGLNPALFDYNTLMASLCKEGSLEQAKSLFQ 409

Query: 1141 DMTTSRVHPDVVAYTVLADGLCKNGRASDAVKVLDLMVQKGEEPNTLTYNAVINGLCKEG 1320
            +M  +   PD++++  + DG  K G      ++   MV+ G  P+ LT++ +IN L K G
Sbjct: 410  EMGNANCEPDIISFNTMIDGTLKAGDFQFVKELQMKMVEMGLRPDALTFSTLINRLSKLG 469

Query: 1321 RVDDALKILEMMAKKGKKPDVVTYNTLLKGLAGVGKIEEAMELWELLLSKEFHIKPDVFT 1500
             +D+A   LE M   G  PD + Y++LLKGL+  G   E + L   + +K   +  D   
Sbjct: 470  ELDEAKSALERMVASGFTPDALVYDSLLKGLSSKGDTTEIINLLHQMAAKGTVL--DRKI 527

Query: 1501 LNFLIQGLCKERRLGDAVRIYSTMVQ 1578
            ++ ++  LC   +  D + +  T  Q
Sbjct: 528  VSTILTCLCHSIQEVDVMELLPTFFQ 553



 Score =  116 bits (290), Expect = 2e-23
 Identities = 83/345 (24%), Positives = 153/345 (44%), Gaps = 1/345 (0%)
 Frame = +1

Query: 382  EAVSLFHRAVEDPDSV-PSVPACNSLIHNLRKARHYDLVVSVYSKMAGACVLPSFTSLSA 558
            EA+ LF+   ++ + + P+V   N LI  L K       V ++ KM       +  + + 
Sbjct: 261  EALKLFNSMFDNENCLEPNVFTFNMLIGGLCKEGRLTKAVKIHRKMVKKGSCGNLVTYNM 320

Query: 559  LVESFVNTHKPKFAFGVLGLMIKHGFEVNVYNVNLVLKGFCQSGDCDKAMGLFCQMKRNC 738
            L+   +   K K A  +   ++  GF  N +  ++++ GFC+    + A GLFC+M+ + 
Sbjct: 321  LLGGCLKAGKIKEAMELWKQVLDLGFVPNSFTYSILIDGFCKMRMLNIAKGLFCEMRTHG 380

Query: 739  VLPDSISYNTIVNGLCKAKRSVEARDLFEAMKAGDCKPNLVTFSALIDGLCKNXXXXXXX 918
            + P    YNT++  LCK     +A+ LF+ M   +C+P++++F+ +IDG  K        
Sbjct: 381  LNPALFDYNTLMASLCKEGSLEQAKSLFQEMGNANCEPDIISFNTMIDGTLK-------- 432

Query: 919  XXXXXXXXXXXXANVFVYSALISAFCNKGEIERGKQLFDEMLGKNVTPNVVTYSCLMHAL 1098
                                        G+ +  K+L  +M+   + P+ +T+S L++ L
Sbjct: 433  ---------------------------AGDFQFVKELQMKMVEMGLRPDALTFSTLINRL 465

Query: 1099 CKTGKWQEASQMLNDMTTSRVHPDVVAYTVLADGLCKNGRASDAVKVLDLMVQKGEEPNT 1278
             K G+  EA   L  M  S   PD + Y  L  GL   G  ++ + +L  M  KG   + 
Sbjct: 466  SKLGELDEAKSALERMVASGFTPDALVYDSLLKGLSSKGDTTEIINLLHQMAAKGTVLDR 525

Query: 1279 LTYNAVINGLCKEGRVDDALKILEMMAKKGKKPDVVTYNTLLKGL 1413
               + ++  LC   +  D +++L    +   +   ++ N LL  L
Sbjct: 526  KIVSTILTCLCHSIQEVDVMELLPTFFQGTSEGASISCNELLMQL 570



 Score = 83.2 bits (204), Expect = 2e-13
 Identities = 67/308 (21%), Positives = 124/308 (40%)
 Frame = +1

Query: 376  LTEAVSLFHRAVEDPDSVPSVPACNSLIHNLRKARHYDLVVSVYSKMAGACVLPSFTSLS 555
            LT+AV + HR +    S  ++   N L+    KA      + ++ ++     +P+  + S
Sbjct: 296  LTKAVKI-HRKMVKKGSCGNLVTYNMLLGGCLKAGKIKEAMELWKQVLDLGFVPNSFTYS 354

Query: 556  ALVESFVNTHKPKFAFGVLGLMIKHGFEVNVYNVNLVLKGFCQSGDCDKAMGLFCQMKRN 735
             L++ F        A G+   M  HG    +++ N ++   C+ G  ++A  LF +M   
Sbjct: 355  ILIDGFCKMRMLNIAKGLFCEMRTHGLNPALFDYNTLMASLCKEGSLEQAKSLFQEMGNA 414

Query: 736  CVLPDSISYNTIVNGLCKAKRSVEARDLFEAMKAGDCKPNLVTFSALIDGLCKNXXXXXX 915
               PD IS+NT+++G  KA      ++L   M     +P+ +TFS LI+ L K       
Sbjct: 415  NCEPDIISFNTMIDGTLKAGDFQFVKELQMKMVEMGLRPDALTFSTLINRLSK------- 467

Query: 916  XXXXXXXXXXXXXANVFVYSALISAFCNKGEIERGKQLFDEMLGKNVTPNVVTYSCLMHA 1095
                                         GE++  K   + M+    TP+ + Y  L+  
Sbjct: 468  ----------------------------LGELDEAKSALERMVASGFTPDALVYDSLLKG 499

Query: 1096 LCKTGKWQEASQMLNDMTTSRVHPDVVAYTVLADGLCKNGRASDAVKVLDLMVQKGEEPN 1275
            L   G   E   +L+ M       D    + +   LC + +  D +++L    Q   E  
Sbjct: 500  LSSKGDTTEIINLLHQMAAKGTVLDRKIVSTILTCLCHSIQEVDVMELLPTFFQGTSEGA 559

Query: 1276 TLTYNAVI 1299
            +++ N ++
Sbjct: 560  SISCNELL 567


>ref|NP_194530.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
            gi|75208278|sp|Q9SUD8.1|PP340_ARATH RecName:
            Full=Pentatricopeptide repeat-containing protein
            At4g28010 gi|4455360|emb|CAB36770.1| putative protein
            [Arabidopsis thaliana] gi|7269655|emb|CAB79603.1|
            putative protein [Arabidopsis thaliana]
            gi|332660020|gb|AEE85420.1| pentatricopeptide
            repeat-containing protein [Arabidopsis thaliana]
          Length = 704

 Score =  407 bits (1045), Expect = e-111
 Identities = 214/494 (43%), Positives = 307/494 (62%)
 Frame = +1

Query: 376  LTEAVSLFHRAVEDPDSVPSVPACNSLIHNLRKARHYDLVVSVYSKMAGACVLPSFTSLS 555
            L  AVS+F +AV+   S+    A N+L+  L ++R+++L  S Y KM       +F SLS
Sbjct: 54   LKNAVSVFQQAVDSGSSLAF--AGNNLMAKLVRSRNHELAFSFYRKMLETDTFINFVSLS 111

Query: 556  ALVESFVNTHKPKFAFGVLGLMIKHGFEVNVYNVNLVLKGFCQSGDCDKAMGLFCQMKRN 735
             L+E +V   K  FAFGVL LM+K GF  NVYN N++LKG C++ +C KA+ L  +M+RN
Sbjct: 112  GLLECYVQMRKTGFAFGVLALMLKRGFAFNVYNHNILLKGLCRNLECGKAVSLLREMRRN 171

Query: 736  CVLPDSISYNTIVNGLCKAKRSVEARDLFEAMKAGDCKPNLVTFSALIDGLCKNXXXXXX 915
             ++PD  SYNT++ G C+ K   +A +L   MK   C  +LVT+  LID  CK       
Sbjct: 172  SLMPDVFSYNTVIRGFCEGKELEKALELANEMKGSGCSWSLVTWGILIDAFCKAGKMDEA 231

Query: 916  XXXXXXXXXXXXXANVFVYSALISAFCNKGEIERGKQLFDEMLGKNVTPNVVTYSCLMHA 1095
                         A++ VY++LI  FC+ GE++RGK LFDE+L +  +P  +TY+ L+  
Sbjct: 232  MGFLKEMKFMGLEADLVVYTSLIRGFCDCGELDRGKALFDEVLERGDSPCAITYNTLIRG 291

Query: 1096 LCKTGKWQEASQMLNDMTTSRVHPDVVAYTVLADGLCKNGRASDAVKVLDLMVQKGEEPN 1275
             CK G+ +EAS++   M    V P+V  YT L DGLC  G+  +A+++L+LM++K EEPN
Sbjct: 292  FCKLGQLKEASEIFEFMIERGVRPNVYTYTGLIDGLCGVGKTKEALQLLNLMIEKDEEPN 351

Query: 1276 TLTYNAVINGLCKEGRVDDALKILEMMAKKGKKPDVVTYNTLLKGLAGVGKIEEAMELWE 1455
             +TYN +IN LCK+G V DA++I+E+M K+  +PD +TYN LL GL   G ++EA +L  
Sbjct: 352  AVTYNIIINKLCKDGLVADAVEIVELMKKRRTRPDNITYNILLGGLCAKGDLDEASKLLY 411

Query: 1456 LLLSKEFHIKPDVFTLNFLIQGLCKERRLGDAVRIYSTMVQRGFQVNIVTYNILIDGYLN 1635
            L+L    +  PDV + N LI GLCKE RL  A+ IY  +V++    + VT NIL++  L 
Sbjct: 412  LMLKDSSYTDPDVISYNALIHGLCKENRLHQALDIYDLLVEKLGAGDRVTTNILLNSTLK 471

Query: 1636 AGKITKALELWKYAVDLGFSPNSVTCTILIDGLCRMQMLRMAKGLFNKKRASGVRPTVIE 1815
            AG + KA+ELWK   D     NS T T +IDG C+  ML +AKGL  K R S ++P+V +
Sbjct: 472  AGDVNKAMELWKQISDSKIVRNSDTYTAMIDGFCKTGMLNVAKGLLCKMRVSELQPSVFD 531

Query: 1816 YNALMASLCRESSL 1857
            YN L++SLC+E SL
Sbjct: 532  YNCLLSSLCKEGSL 545



 Score =  164 bits (415), Expect = 7e-38
 Identities = 128/525 (24%), Positives = 226/525 (43%), Gaps = 73/525 (13%)
 Frame = +1

Query: 382  EAVSLFHRAVEDPDSVPSVPACNSLIHNLRKARHYDLVVSVYSKMAGACVLPSFTSLSAL 561
            +AVSL  R +     +P V + N++I    + +  +  + + ++M G+    S  +   L
Sbjct: 160  KAVSLL-REMRRNSLMPDVFSYNTVIRGFCEGKELEKALELANEMKGSGCSWSLVTWGIL 218

Query: 562  VESFVNTHKPKFAFGVLGLMIKHGFEVNVYNVNLVLKGFCQSGDCDKAMGLFCQMKRNCV 741
            +++F    K   A G L  M   G E ++     +++GFC  G+ D+   LF ++     
Sbjct: 219  IDAFCKAGKMDEAMGFLKEMKFMGLEADLVVYTSLIRGFCDCGELDRGKALFDEVLERGD 278

Query: 742  LPDSISYNTIVNGLCKAKRSVEARDLFEAM-KAG-------------------------- 840
             P +I+YNT++ G CK  +  EA ++FE M + G                          
Sbjct: 279  SPCAITYNTLIRGFCKLGQLKEASEIFEFMIERGVRPNVYTYTGLIDGLCGVGKTKEALQ 338

Query: 841  --------DCKPNLVTFSALIDGLCKNXXXXXXXXXXXXXXXXXXXANVFVYSALISAFC 996
                    D +PN VT++ +I+ LCK+                    +   Y+ L+   C
Sbjct: 339  LLNLMIEKDEEPNAVTYNIIINKLCKDGLVADAVEIVELMKKRRTRPDNITYNILLGGLC 398

Query: 997  NKGEIERGKQLFDEMLGKN--VTPNVVTYSCLMHALCK---------------------- 1104
             KG+++   +L   ML  +    P+V++Y+ L+H LCK                      
Sbjct: 399  AKGDLDEASKLLYLMLKDSSYTDPDVISYNALIHGLCKENRLHQALDIYDLLVEKLGAGD 458

Query: 1105 -------------TGKWQEASQMLNDMTTSRVHPDVVAYTVLADGLCKNGRASDAVKVLD 1245
                          G   +A ++   ++ S++  +   YT + DG CK G  + A  +L 
Sbjct: 459  RVTTNILLNSTLKAGDVNKAMELWKQISDSKIVRNSDTYTAMIDGFCKTGMLNVAKGLLC 518

Query: 1246 LMVQKGEEPNTLTYNAVINGLCKEGRVDDALKILEMMAKKGKKPDVVTYNTLLKGLAGVG 1425
             M     +P+   YN +++ LCKEG +D A ++ E M +    PDVV++N ++ G    G
Sbjct: 519  KMRVSELQPSVFDYNCLLSSLCKEGSLDQAWRLFEEMQRDNNFPDVVSFNIMIDGSLKAG 578

Query: 1426 KIEEAMELWELLLSKEFHIKPDVFTLNFLIQGLCKERRLGDAVRIYSTMVQRGFQVNIVT 1605
             I+ A  L  L+      + PD+FT + LI    K   L +A+  +  MV  GF+ +   
Sbjct: 579  DIKSAESL--LVGMSRAGLSPDLFTYSKLINRFLKLGYLDEAISFFDKMVDSGFEPDAHI 636

Query: 1606 YNILIDGYLNAGKITKALELWKYAVDLGF-SPNSVTCTILIDGLC 1737
             + ++   ++ G+  K  EL K  VD        +TCT++ D +C
Sbjct: 637  CDSVLKYCISQGETDKLTELVKKLVDKDIVLDKELTCTVM-DYMC 680



 Score =  147 bits (370), Expect = 1e-32
 Identities = 95/374 (25%), Positives = 169/374 (45%), Gaps = 2/374 (0%)
 Frame = +1

Query: 376  LTEAVSLFHRAVEDPDSVPSVPACNSLIHNLRKARHYDLVVSVYSKMAGACVLPSFTSLS 555
            L    +LF   +E  DS P     N+LI    K         ++  M    V P+  + +
Sbjct: 263  LDRGKALFDEVLERGDS-PCAITYNTLIRGFCKLGQLKEASEIFEFMIERGVRPNVYTYT 321

Query: 556  ALVESFVNTHKPKFAFGVLGLMIKHGFEVNVYNVNLVLKGFCQSGDCDKAMGLFCQMKRN 735
             L++      K K A  +L LMI+   E N    N+++   C+ G    A+ +   MK+ 
Sbjct: 322  GLIDGLCGVGKTKEALQLLNLMIEKDEEPNAVTYNIIINKLCKDGLVADAVEIVELMKKR 381

Query: 736  CVLPDSISYNTIVNGLCKAKRSVEARDLFEAM--KAGDCKPNLVTFSALIDGLCKNXXXX 909
               PD+I+YN ++ GLC      EA  L   M   +    P++++++ALI GLCK     
Sbjct: 382  RTRPDNITYNILLGGLCAKGDLDEASKLLYLMLKDSSYTDPDVISYNALIHGLCKENRLH 441

Query: 910  XXXXXXXXXXXXXXXANVFVYSALISAFCNKGEIERGKQLFDEMLGKNVTPNVVTYSCLM 1089
                            +    + L+++    G++ +  +L+ ++    +  N  TY+ ++
Sbjct: 442  QALDIYDLLVEKLGAGDRVTTNILLNSTLKAGDVNKAMELWKQISDSKIVRNSDTYTAMI 501

Query: 1090 HALCKTGKWQEASQMLNDMTTSRVHPDVVAYTVLADGLCKNGRASDAVKVLDLMVQKGEE 1269
               CKTG    A  +L  M  S + P V  Y  L   LCK G    A ++ + M +    
Sbjct: 502  DGFCKTGMLNVAKGLLCKMRVSELQPSVFDYNCLLSSLCKEGSLDQAWRLFEEMQRDNNF 561

Query: 1270 PNTLTYNAVINGLCKEGRVDDALKILEMMAKKGKKPDVVTYNTLLKGLAGVGKIEEAMEL 1449
            P+ +++N +I+G  K G +  A  +L  M++ G  PD+ TY+ L+     +G ++EA+  
Sbjct: 562  PDVVSFNIMIDGSLKAGDIKSAESLLVGMSRAGLSPDLFTYSKLINRFLKLGYLDEAISF 621

Query: 1450 WELLLSKEFHIKPD 1491
            ++ ++   F  +PD
Sbjct: 622  FDKMVDSGF--EPD 633



 Score = 84.7 bits (208), Expect = 7e-14
 Identities = 65/299 (21%), Positives = 121/299 (40%), Gaps = 1/299 (0%)
 Frame = +1

Query: 376  LTEAVSLFHRAVEDPDSV-PSVPACNSLIHNLRKARHYDLVVSVYSKMAGACVLPSFTSL 552
            L EA  L +  ++D     P V + N+LIH L K       + +Y  +          + 
Sbjct: 403  LDEASKLLYLMLKDSSYTDPDVISYNALIHGLCKENRLHQALDIYDLLVEKLGAGDRVTT 462

Query: 553  SALVESFVNTHKPKFAFGVLGLMIKHGFEVNVYNVNLVLKGFCQSGDCDKAMGLFCQMKR 732
            + L+ S +       A  +   +       N      ++ GFC++G  + A GL C+M+ 
Sbjct: 463  NILLNSTLKAGDVNKAMELWKQISDSKIVRNSDTYTAMIDGFCKTGMLNVAKGLLCKMRV 522

Query: 733  NCVLPDSISYNTIVNGLCKAKRSVEARDLFEAMKAGDCKPNLVTFSALIDGLCKNXXXXX 912
            + + P    YN +++ LCK     +A  LFE M+  +  P++V+F+ +IDG  K      
Sbjct: 523  SELQPSVFDYNCLLSSLCKEGSLDQAWRLFEEMQRDNNFPDVVSFNIMIDGSLKAGDIKS 582

Query: 913  XXXXXXXXXXXXXXANVFVYSALISAFCNKGEIERGKQLFDEMLGKNVTPNVVTYSCLMH 1092
                           ++F YS LI+ F   G ++     FD+M+     P+      ++ 
Sbjct: 583  AESLLVGMSRAGLSPDLFTYSKLINRFLKLGYLDEAISFFDKMVDSGFEPDAHICDSVLK 642

Query: 1093 ALCKTGKWQEASQMLNDMTTSRVHPDVVAYTVLADGLCKNGRASDAVKVLDLMVQKGEE 1269
                 G+  + ++++  +    +  D      + D +C +    D  K L  +    EE
Sbjct: 643  YCISQGETDKLTELVKKLVDKDIVLDKELTCTVMDYMCNSSANMDLAKRLLRVTDDKEE 701