BLASTX nr result

ID: Glycyrrhiza23_contig00016753 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00016753
         (1899 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003548225.1| PREDICTED: zinc finger CCCH domain-containin...   706   0.0  
ref|XP_003534022.1| PREDICTED: zinc finger CCCH domain-containin...   700   0.0  
ref|XP_002280396.1| PREDICTED: zinc finger CCCH domain-containin...   625   e-177
ref|XP_004141129.1| PREDICTED: zinc finger CCCH domain-containin...   621   e-175
ref|XP_002510854.1| F-box and wd40 domain protein, putative [Ric...   613   e-173

>ref|XP_003548225.1| PREDICTED: zinc finger CCCH domain-containing protein 48-like
            [Glycine max]
          Length = 427

 Score =  706 bits (1821), Expect = 0.0
 Identities = 341/434 (78%), Positives = 365/434 (84%), Gaps = 2/434 (0%)
 Frame = -3

Query: 1516 MDVDGGNKRVYHRLGGPTGDSKNQKVCFHWQAGKCNRHPCAFLHSELPPSN--SNGTSSK 1343
            MDVDGGNKRVY+RLGG   D+K+QKVCFHWQAGKCNR+PC FLHSELP ++  +NG SSK
Sbjct: 1    MDVDGGNKRVYNRLGG---DAKHQKVCFHWQAGKCNRYPCPFLHSELPANSHHANGASSK 57

Query: 1342 RPYGPGDNXXXXXXXXXXXXFNTWXXXXXXXXXXXXXXXXXGAVVVRGDTVCNYWVQGNC 1163
            R Y   DN             NTW                   VVV+ + VCNYW+QGNC
Sbjct: 58   RAY---DNSGFSGPRRSPSFNNTWGRGGSRGGGGAGAGAGR-GVVVKAEKVCNYWIQGNC 113

Query: 1162 SFGERCKFLHSWSLGDGFSLLTQLEGHRKVVSGISMPSGSDKLYTGSTDETVRVWDCQSG 983
            S+GERCKFLH+WS+GDGFSLLTQLEGH+K VS I+ PSGSDKLYTGSTDET R+WDCQSG
Sbjct: 114  SYGERCKFLHTWSVGDGFSLLTQLEGHQKAVSAIAFPSGSDKLYTGSTDETARIWDCQSG 173

Query: 982  KCIAVINLGGEVGCMISEGPWVFVGIPNFVKVWNTQNSMELSLDGPVGQVYALVVNNDML 803
            KC+ VINLGGEVGCMISEGPWVFVGIPNFVK WNTQN  ELSL+GPVGQVYALVVNNDML
Sbjct: 174  KCVGVINLGGEVGCMISEGPWVFVGIPNFVKAWNTQNLSELSLNGPVGQVYALVVNNDML 233

Query: 802  FAGTQDGSILIWKFNVIANCFEPAASLKGHTRGVVSLVVGANRLYSGSMDNTIRVWNLEN 623
            FAGTQDGSIL WKFNV  NCFEPAASLKGH+RGVVSLVVGANRLYSGSMDNTIRVWNLE 
Sbjct: 234  FAGTQDGSILAWKFNVATNCFEPAASLKGHSRGVVSLVVGANRLYSGSMDNTIRVWNLET 293

Query: 622  LQCLQTLTEHTSVVMSVLCWDQFLLSCSLDKTVKVWFATESGNLEVTYTHNEENGILTLC 443
            LQCLQTLTEHTSVVMSVLCWDQFLLSCSLDKTVKVW+ATESGNLEVTYTHNEENGILTLC
Sbjct: 294  LQCLQTLTEHTSVVMSVLCWDQFLLSCSLDKTVKVWYATESGNLEVTYTHNEENGILTLC 353

Query: 442  GMHDSQGKPVLLCSSNDNTVCLYDLPSFAERGKIFTKQEVRAIQAGPGSIFFTGDGTGQV 263
            GMHDSQGKP+LLC+ NDNTV LYDLPSFAERGKI TK+EVRAIQ GP  IFFTGDGTG+V
Sbjct: 354  GMHDSQGKPILLCACNDNTVHLYDLPSFAERGKILTKKEVRAIQIGPNGIFFTGDGTGEV 413

Query: 262  RVWNWIPEPTPILQ 221
            RVWNWI E T   Q
Sbjct: 414  RVWNWIAEATTTTQ 427


>ref|XP_003534022.1| PREDICTED: zinc finger CCCH domain-containing protein 48-like
            [Glycine max]
          Length = 426

 Score =  700 bits (1807), Expect = 0.0
 Identities = 338/434 (77%), Positives = 364/434 (83%), Gaps = 2/434 (0%)
 Frame = -3

Query: 1516 MDVDGGNKRVYHRLGGPTGDSKNQKVCFHWQAGKCNRHPCAFLHSELPPSN--SNGTSSK 1343
            MDVDGGNKRVY+RLGG   D+K+QKVC+HWQAGKCNR+PC FLHSE P ++  +NGTSSK
Sbjct: 1    MDVDGGNKRVYNRLGG---DAKHQKVCYHWQAGKCNRYPCPFLHSESPANSHHANGTSSK 57

Query: 1342 RPYGPGDNXXXXXXXXXXXXFNTWXXXXXXXXXXXXXXXXXGAVVVRGDTVCNYWVQGNC 1163
            R Y   DN             NTW                   VVV+ + VCNYW+QG+C
Sbjct: 58   RTY---DNSGFSGPRRSPNFNNTWGRGGGRGGGGGGGAGR--GVVVKAEKVCNYWIQGSC 112

Query: 1162 SFGERCKFLHSWSLGDGFSLLTQLEGHRKVVSGISMPSGSDKLYTGSTDETVRVWDCQSG 983
            S+GERCKFLHSWS+GDGFSLLTQLEGH+K VS I+ PSGSDKLYTGSTDET R+WDCQ G
Sbjct: 113  SYGERCKFLHSWSVGDGFSLLTQLEGHQKAVSAIAFPSGSDKLYTGSTDETARIWDCQCG 172

Query: 982  KCIAVINLGGEVGCMISEGPWVFVGIPNFVKVWNTQNSMELSLDGPVGQVYALVVNNDML 803
            KC+ VINLGGEVGCMISEGPWVFVGIPNFVK WNTQN  ELSL+GPVGQVYALVVNNDML
Sbjct: 173  KCVGVINLGGEVGCMISEGPWVFVGIPNFVKAWNTQNLSELSLNGPVGQVYALVVNNDML 232

Query: 802  FAGTQDGSILIWKFNVIANCFEPAASLKGHTRGVVSLVVGANRLYSGSMDNTIRVWNLEN 623
            FAGTQDGSIL WKFNV  NCFEPAASLKGH+RGVVSLVVGANRLYSGSMDNTI+VWNLE 
Sbjct: 233  FAGTQDGSILAWKFNVATNCFEPAASLKGHSRGVVSLVVGANRLYSGSMDNTIKVWNLET 292

Query: 622  LQCLQTLTEHTSVVMSVLCWDQFLLSCSLDKTVKVWFATESGNLEVTYTHNEENGILTLC 443
            LQCLQTLTEHTSVVMSVLCWDQFLLSCSLDKTVKVW+ATESGNLEVTY+HNEENGILTLC
Sbjct: 293  LQCLQTLTEHTSVVMSVLCWDQFLLSCSLDKTVKVWYATESGNLEVTYSHNEENGILTLC 352

Query: 442  GMHDSQGKPVLLCSSNDNTVCLYDLPSFAERGKIFTKQEVRAIQAGPGSIFFTGDGTGQV 263
            GMHDSQGKP+LLC+ NDNTV LYDLPSFAERGKI TKQEVRAIQ GP  IFFTGDGTG+V
Sbjct: 353  GMHDSQGKPILLCACNDNTVHLYDLPSFAERGKILTKQEVRAIQIGPNGIFFTGDGTGEV 412

Query: 262  RVWNWIPEPTPILQ 221
            RVWNWI E T   Q
Sbjct: 413  RVWNWIAEATTTTQ 426


>ref|XP_002280396.1| PREDICTED: zinc finger CCCH domain-containing protein 48 [Vitis
            vinifera] gi|297741123|emb|CBI31854.3| unnamed protein
            product [Vitis vinifera]
          Length = 442

 Score =  625 bits (1613), Expect = e-177
 Identities = 301/437 (68%), Positives = 342/437 (78%), Gaps = 11/437 (2%)
 Frame = -3

Query: 1516 MDVDG-GNKRVYHRLGGPTGDSKNQKVCFHWQAGKCNRHPCAFLHSELP--------PSN 1364
            MDVD  GNKRV+ RLG      K  KVC+HW+AG+CN+ PC +LH ELP        P  
Sbjct: 1    MDVDEHGNKRVFQRLGASNDSGKQHKVCYHWRAGRCNKFPCPYLHRELPAPPPQQHQPFI 60

Query: 1363 SNGTSSKRP-YGPGDNXXXXXXXXXXXXFNTWXXXXXXXXXXXXXXXXXGAVVVRG-DTV 1190
            SNG+SSKRP  G  D+              TW                 G  V R  + +
Sbjct: 61   SNGSSSKRPNQGVHDDRSFSGARRSPNFNPTWGRVHGAGAGNRAQGSGAGNRVFRKIEKL 120

Query: 1189 CNYWVQGNCSFGERCKFLHSWSLGDGFSLLTQLEGHRKVVSGISMPSGSDKLYTGSTDET 1010
            CNYW+QGNCS+GE+CKFLHSWS+GD FS LTQLEGH+KVVSGI++PSGSDKLYTGS DET
Sbjct: 121  CNYWLQGNCSYGEKCKFLHSWSVGDCFSSLTQLEGHQKVVSGIALPSGSDKLYTGSKDET 180

Query: 1009 VRVWDCQSGKCIAVINLGGEVGCMISEGPWVFVGIPNFVKVWNTQNSMELSLDGPVGQVY 830
            VR+WDCQSG+C  V+NLGGEVGCMISEGPW+FVGIPN VK W+TQN+ ELSL GP GQVY
Sbjct: 181  VRIWDCQSGQCTGVVNLGGEVGCMISEGPWLFVGIPNVVKAWHTQNNTELSLSGPTGQVY 240

Query: 829  ALVVNNDMLFAGTQDGSILIWKFNVIANCFEPAASLKGHTRGVVSLVVGANRLYSGSMDN 650
            ALVV ND+LFAG QDG+IL WKFN ++NCFEPAASLKGHT+ V++LVVGANRLYSGSMD 
Sbjct: 241  ALVVGNDLLFAGVQDGAILAWKFNAVSNCFEPAASLKGHTQSVITLVVGANRLYSGSMDR 300

Query: 649  TIRVWNLENLQCLQTLTEHTSVVMSVLCWDQFLLSCSLDKTVKVWFATESGNLEVTYTHN 470
            +IRVWNLENLQCLQTLTEHTSVVMS+LCWDQFLLSCSLD TVKVW ATESGNLEVTYTHN
Sbjct: 301  SIRVWNLENLQCLQTLTEHTSVVMSLLCWDQFLLSCSLDGTVKVWVATESGNLEVTYTHN 360

Query: 469  EENGILTLCGMHDSQGKPVLLCSSNDNTVCLYDLPSFAERGKIFTKQEVRAIQAGPGSIF 290
            EE G+L LCGMHD + KPVLLCS NDNTV +YDLPSF+ERGKIF ++ +RAIQ GPG +F
Sbjct: 361  EEQGVLYLCGMHDPEAKPVLLCSCNDNTVRVYDLPSFSERGKIFAREGIRAIQIGPGGLF 420

Query: 289  FTGDGTGQVRVWNWIPE 239
            FTGDG+GQVRVWNW  E
Sbjct: 421  FTGDGSGQVRVWNWSTE 437


>ref|XP_004141129.1| PREDICTED: zinc finger CCCH domain-containing protein 48-like
            [Cucumis sativus] gi|449521989|ref|XP_004168011.1|
            PREDICTED: zinc finger CCCH domain-containing protein
            48-like [Cucumis sativus]
          Length = 432

 Score =  621 bits (1601), Expect = e-175
 Identities = 293/435 (67%), Positives = 350/435 (80%), Gaps = 9/435 (2%)
 Frame = -3

Query: 1516 MDVDGGNKRVYHRLGGPTGDSKNQKVCFHWQAGKCNRHPCAFLHSEL---PPSNSNGTS- 1349
            MDVDGG KRV+ RLG P+GDS+NQKVCFHW+AGKC+R+PC +LH EL   P + SNG + 
Sbjct: 1    MDVDGGGKRVFQRLGAPSGDSRNQKVCFHWRAGKCSRYPCPYLHRELNGPPHAASNGAAN 60

Query: 1348 --SKRPYG---PGDNXXXXXXXXXXXXFNTWXXXXXXXXXXXXXXXXXGAVVVRGDTVCN 1184
              SKR +G      +             +TW                   ++ + + +CN
Sbjct: 61   AASKRGHGFASDDSSVSVPRRSPNFSGGSTWGRVHGGGNR----------IIRKTEKLCN 110

Query: 1183 YWVQGNCSFGERCKFLHSWSLGDGFSLLTQLEGHRKVVSGISMPSGSDKLYTGSTDETVR 1004
            +WVQGNC+FG++C++LHSWSLG+ FS LTQL+GH+KV++GI+ PSGSDKLYTGS DETVR
Sbjct: 111  FWVQGNCTFGDKCRYLHSWSLGESFSHLTQLDGHQKVITGITFPSGSDKLYTGSKDETVR 170

Query: 1003 VWDCQSGKCIAVINLGGEVGCMISEGPWVFVGIPNFVKVWNTQNSMELSLDGPVGQVYAL 824
            VWDCQSG+C+A+INLGG+VG MI+EGPWVFVGIPN VK WN Q S +LSL GPVG VY+L
Sbjct: 171  VWDCQSGQCMAIINLGGQVGSMIAEGPWVFVGIPNCVKAWNIQTSADLSLSGPVGLVYSL 230

Query: 823  VVNNDMLFAGTQDGSILIWKFNVIANCFEPAASLKGHTRGVVSLVVGANRLYSGSMDNTI 644
            VV ND+LFAGTQDGSIL WKFNV  NCFEPAASL GHT  VVSLVVGANRLYSGSMD+TI
Sbjct: 231  VVGNDLLFAGTQDGSILAWKFNVATNCFEPAASLSGHTLPVVSLVVGANRLYSGSMDHTI 290

Query: 643  RVWNLENLQCLQTLTEHTSVVMSVLCWDQFLLSCSLDKTVKVWFATESGNLEVTYTHNEE 464
            +VW+LE+LQCLQTLT+HTSVVMSVLCW+QFLLSCSLDKT+KVW ATESGNLEVTYT  E+
Sbjct: 291  KVWSLESLQCLQTLTDHTSVVMSVLCWEQFLLSCSLDKTIKVWAATESGNLEVTYTQKED 350

Query: 463  NGILTLCGMHDSQGKPVLLCSSNDNTVCLYDLPSFAERGKIFTKQEVRAIQAGPGSIFFT 284
            +G+LTLCGMHD  GKP+LLCS NDN+V LYDLPSF+ERGKI++K+E+R+IQAGPG IFFT
Sbjct: 351  HGLLTLCGMHDLDGKPILLCSCNDNSVRLYDLPSFSERGKIYSKEEIRSIQAGPGGIFFT 410

Query: 283  GDGTGQVRVWNWIPE 239
            GDGTGQV+VW W+ E
Sbjct: 411  GDGTGQVKVWTWLTE 425


>ref|XP_002510854.1| F-box and wd40 domain protein, putative [Ricinus communis]
            gi|223549969|gb|EEF51456.1| F-box and wd40 domain
            protein, putative [Ricinus communis]
          Length = 445

 Score =  613 bits (1580), Expect = e-173
 Identities = 293/444 (65%), Positives = 341/444 (76%), Gaps = 12/444 (2%)
 Frame = -3

Query: 1522 LSMDVDGGN---KRVYHRLGGP-----TGDSKNQKVCFHWQAGKCNRHPCAFLHSELPPS 1367
            + +D  GGN    RV++RLGG      T D + QKVC HW+AG+CNR PC +LH ELPP 
Sbjct: 1    MDLDAQGGNTNSNRVFNRLGGAQLSSSTNDPRQQKVCHHWRAGRCNRFPCPYLHRELPPP 60

Query: 1366 ----NSNGTSSKRPYGPGDNXXXXXXXXXXXXFNTWXXXXXXXXXXXXXXXXXGAVVVRG 1199
                 SNG SS     P                +                     V+ + 
Sbjct: 61   PPPHGSNGHSSSNNNAPSKRGFSNDSGFSGPSGSRRSGNFNNASSWGRVGNNSNKVLRKT 120

Query: 1198 DTVCNYWVQGNCSFGERCKFLHSWSLGDGFSLLTQLEGHRKVVSGISMPSGSDKLYTGST 1019
            + VCN+WVQG CS+G++C+FLHSW+LG+ FSLLTQL+GH+KVV+GI++PSGSDKLYTGS 
Sbjct: 121  EKVCNFWVQGKCSYGDKCRFLHSWNLGESFSLLTQLDGHQKVVTGIALPSGSDKLYTGSK 180

Query: 1018 DETVRVWDCQSGKCIAVINLGGEVGCMISEGPWVFVGIPNFVKVWNTQNSMELSLDGPVG 839
            DETVRVWDCQSG+C+AVI LGGEVGCMISEGPW+FVGIPN VK WNTQ + +LSL GPVG
Sbjct: 181  DETVRVWDCQSGQCMAVIQLGGEVGCMISEGPWIFVGIPNVVKAWNTQTNTDLSLTGPVG 240

Query: 838  QVYALVVNNDMLFAGTQDGSILIWKFNVIANCFEPAASLKGHTRGVVSLVVGANRLYSGS 659
            QVYALVV ND+LFAGTQDG+IL+WK+N     FEPAASL GHT  VVSLVVGANRLYSGS
Sbjct: 241  QVYALVVGNDLLFAGTQDGAILVWKYNAATFNFEPAASLPGHTVAVVSLVVGANRLYSGS 300

Query: 658  MDNTIRVWNLENLQCLQTLTEHTSVVMSVLCWDQFLLSCSLDKTVKVWFATESGNLEVTY 479
            MD++IRVWNLE LQC+QTLT+HTSVVMSVLCWDQFLLSCSLD+ +KVW ATESGNL+VTY
Sbjct: 301  MDHSIRVWNLETLQCVQTLTDHTSVVMSVLCWDQFLLSCSLDQKIKVWAATESGNLDVTY 360

Query: 478  THNEENGILTLCGMHDSQGKPVLLCSSNDNTVCLYDLPSFAERGKIFTKQEVRAIQAGPG 299
            THNEE+G+LTLCGMHD +GKPVLLCS NDN+V L DLPSF+ERGKIF KQE+RAIQ GPG
Sbjct: 361  THNEEHGLLTLCGMHDLEGKPVLLCSCNDNSVRLLDLPSFSERGKIFAKQEIRAIQTGPG 420

Query: 298  SIFFTGDGTGQVRVWNWIPEPTPI 227
             +FFTGDGTGQVRVW W+ EPT I
Sbjct: 421  GLFFTGDGTGQVRVWKWVAEPTAI 444


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