BLASTX nr result

ID: Glycyrrhiza23_contig00016733 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00016733
         (394 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFK37847.1| unknown [Medicago truncatula]                          128   5e-28
ref|XP_003598426.1| hypothetical protein MTR_3g013540 [Medicago ...   128   5e-28
ref|XP_002325689.1| predicted protein [Populus trichocarpa] gi|2...    91   1e-16
ref|XP_002271315.1| PREDICTED: uncharacterized protein LOC100264...    84   1e-14
ref|XP_002319928.1| predicted protein [Populus trichocarpa] gi|2...    83   3e-14

>gb|AFK37847.1| unknown [Medicago truncatula]
          Length = 394

 Score =  128 bits (321), Expect = 5e-28
 Identities = 75/119 (63%), Positives = 83/119 (69%), Gaps = 10/119 (8%)
 Frame = -2

Query: 393 GRVVASRYG-GGNSGAVRKRSLPENRGGGGGSEVRVKKRWEIPAENVDVDVSGVVLLPKI 217
           GR+VASRY  GG  G  RKRS  EN  G G SE+R KKRWEIP E  +VDVSG V+LPKI
Sbjct: 271 GRIVASRYNSGGGGGDARKRSFSENNKGLG-SEIRAKKRWEIPIE--EVDVSGFVMLPKI 327

Query: 216 RTLRCVNGVDESPRDSGAAKRVAELNGKRSYFCPDQVE---------GSVCQVLSFVEE 67
            T+R V   DESPRDSGA KRVAELNGKRSYFC +  E         GSVCQVL+F E+
Sbjct: 328 STMRFV---DESPRDSGAVKRVAELNGKRSYFCDEDEEERVMVEGEGGSVCQVLNFAED 383


>ref|XP_003598426.1| hypothetical protein MTR_3g013540 [Medicago truncatula]
           gi|355487474|gb|AES68677.1| hypothetical protein
           MTR_3g013540 [Medicago truncatula]
          Length = 394

 Score =  128 bits (321), Expect = 5e-28
 Identities = 75/119 (63%), Positives = 83/119 (69%), Gaps = 10/119 (8%)
 Frame = -2

Query: 393 GRVVASRYG-GGNSGAVRKRSLPENRGGGGGSEVRVKKRWEIPAENVDVDVSGVVLLPKI 217
           GR+VASRY  GG  G  RKRS  EN  G G SE+R KKRWEIP E  +VDVSG V+LPKI
Sbjct: 271 GRIVASRYNSGGGGGDARKRSFSENNKGLG-SEIRAKKRWEIPIE--EVDVSGFVMLPKI 327

Query: 216 RTLRCVNGVDESPRDSGAAKRVAELNGKRSYFCPDQVE---------GSVCQVLSFVEE 67
            T+R V   DESPRDSGA KRVAELNGKRSYFC +  E         GSVCQVL+F E+
Sbjct: 328 STMRFV---DESPRDSGAVKRVAELNGKRSYFCDEDEEERVMVEEEGGSVCQVLNFAED 383


>ref|XP_002325689.1| predicted protein [Populus trichocarpa] gi|222862564|gb|EEF00071.1|
           predicted protein [Populus trichocarpa]
          Length = 443

 Score = 90.9 bits (224), Expect = 1e-16
 Identities = 69/145 (47%), Positives = 80/145 (55%), Gaps = 36/145 (24%)
 Frame = -2

Query: 393 GRVVASRYG-------GGNSGA--VRKRSLPEN-----------RGGGGGSEV---RVKK 283
           GRVVASRY         GN  A   RKRSLP+N           RG G    +   RVKK
Sbjct: 298 GRVVASRYSQIGTNQSNGNLSASEARKRSLPDNEKEDVNKRRASRGNGACQRMDSGRVKK 357

Query: 282 RWEIPAENV----------DVDVSGVV-LLPKIRTLRCVNGVDESPRDSGAAKRVAELNG 136
           +WEIP E V             VS V  +LPKIRT+RCV    E+PRDSGAAKRVA+L G
Sbjct: 358 KWEIPIEVVVYKGDDEGESPPTVSTVADVLPKIRTVRCVA---ETPRDSGAAKRVADLVG 414

Query: 135 KRSYFCPDQVEG--SVCQVLSFVEE 67
           K+ +FC ++ E   SVCQ LSF  E
Sbjct: 415 KKPFFCIEEAEAGDSVCQALSFAGE 439


>ref|XP_002271315.1| PREDICTED: uncharacterized protein LOC100264907 [Vitis vinifera]
          Length = 466

 Score = 84.0 bits (206), Expect = 1e-14
 Identities = 66/155 (42%), Positives = 78/155 (50%), Gaps = 47/155 (30%)
 Frame = -2

Query: 393 GRVVASRYG-------GGNSGAVRKRSLPENRGGG--------------GG--------- 304
           GRVVASRY        GG S ++RKRSLPEN   G              GG         
Sbjct: 305 GRVVASRYSLIGNQSTGGCSSSLRKRSLPENEDNGKRCDKRRNSSLEKPGGIFQENGENL 364

Query: 303 SEVRVKKRWEIPAENVDVDVS---------------GVVLLPKIRTLRCVNGVDESPRDS 169
            + RVKK+WEIP+E V V  S                  +LP IRT RC+N   ESPR+S
Sbjct: 365 DKGRVKKKWEIPSEVVVVHKSLENDESPPSPRSITKMPDILPMIRTDRCIN---ESPRNS 421

Query: 168 GAAKRVAELNGKRSYFCPDQ--VEGSVCQVLSFVE 70
           G AKRVAEL G++SYFC D+   + SV   L F E
Sbjct: 422 GPAKRVAELIGRKSYFCADEDGEDHSVSLSLDFAE 456


>ref|XP_002319928.1| predicted protein [Populus trichocarpa] gi|222858304|gb|EEE95851.1|
           predicted protein [Populus trichocarpa]
          Length = 446

 Score = 82.8 bits (203), Expect = 3e-14
 Identities = 66/146 (45%), Positives = 78/146 (53%), Gaps = 37/146 (25%)
 Frame = -2

Query: 393 GRVVASRY---------GGGNSGAVRKRSLPEN-----------RGGGGGSEV---RVKK 283
           GRVVASRY         G   +   RKRSLP+N           RG G        RVKK
Sbjct: 298 GRVVASRYNQIGTNQSNGNLTASEARKRSLPDNEKEDVNKRRASRGNGVSQRAESGRVKK 357

Query: 282 RWEIPAENV----DVD------VSGVV-LLPKIRTLRCVNGVDESPRDSGAAKRVAELNG 136
           RWEIP+E V    D +      VS V  +LP I+T+R    V E+PRDSG AKRVA+L G
Sbjct: 358 RWEIPSEVVVYKDDAEEESPQAVSVVTDMLPNIKTVR---SVAETPRDSGPAKRVADLVG 414

Query: 135 KRSYFCPDQ---VEGSVCQVLSFVEE 67
           ++SYF P +      SVCQ LSF EE
Sbjct: 415 RKSYFPPVEETAAGDSVCQALSFAEE 440


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