BLASTX nr result

ID: Glycyrrhiza23_contig00016729 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00016729
         (1110 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003520717.1| PREDICTED: trafficking protein particle comp...   507   e-141
ref|XP_003554471.1| PREDICTED: trafficking protein particle comp...   500   e-139
ref|XP_003554470.1| PREDICTED: trafficking protein particle comp...   500   e-139
ref|XP_003554472.1| PREDICTED: trafficking protein particle comp...   495   e-138
ref|XP_002263641.2| PREDICTED: trafficking protein particle comp...   456   e-126

>ref|XP_003520717.1| PREDICTED: trafficking protein particle complex subunit 8-like
           [Glycine max]
          Length = 1289

 Score =  507 bits (1306), Expect = e-141
 Identities = 252/294 (85%), Positives = 270/294 (91%), Gaps = 3/294 (1%)
 Frame = -2

Query: 875 MDPARTPLGQMLLEEITPVVMVLSTPSVEEACLKNGFSFLQMLTPFCSFNNIDVPVRTAS 696
           MDP  TPLGQMLLEEITPVVM+LSTPSVE+  LKNG SFLQ LTPFCSFNNIDVPVRTAS
Sbjct: 2   MDPPMTPLGQMLLEEITPVVMLLSTPSVEQVSLKNGLSFLQTLTPFCSFNNIDVPVRTAS 61

Query: 695 DQPYRLHKFKLRLFYASDVRKPDLKVANEQLEQVITDAGEKVFSELCSDVPEMNHELASS 516
           DQPYRLHKFKLRLFYASDVRKPDLKVA EQ++QVIT+AGEK FSE CSDV E+NHEL+SS
Sbjct: 62  DQPYRLHKFKLRLFYASDVRKPDLKVAKEQVKQVITEAGEKEFSESCSDVSEINHELSSS 121

Query: 515 -EYRNTPSWFQFFNKELVRIASFSDHEAFDHPVACLLAVSSKDEQPINRFVDLFNTNKLP 339
            EY++TPSWF+F NKELVR+ASFSDHEAFDHPV CL+AVSSKDEQPI+RFVDL N NKLP
Sbjct: 122 SEYQHTPSWFRFLNKELVRVASFSDHEAFDHPVICLVAVSSKDEQPISRFVDLCNANKLP 181

Query: 338 SLLNDGAMDPKILKHYLLVHDNQDGPADRASKILTEMRSTFGTSDCLLLCINSSPDGPIK 159
           SLLNDGAMDPKI KHYLLVHDNQDGPADRASKILT++RSTFG SDC LLCINSS D PIK
Sbjct: 182 SLLNDGAMDPKISKHYLLVHDNQDGPADRASKILTDIRSTFGASDCSLLCINSSLDAPIK 241

Query: 158 HQVNPWASYISDASP--SQDLGCFLNIDDINEIKDLMQDLSSKHIIPSMEQKIR 3
           HQ NPWASYI+DASP  SQD GCFLNIDDINEIKDLMQDL+SKHIIP+MEQKIR
Sbjct: 242 HQDNPWASYITDASPTHSQDFGCFLNIDDINEIKDLMQDLASKHIIPNMEQKIR 295


>ref|XP_003554471.1| PREDICTED: trafficking protein particle complex subunit 8-like
           isoform 2 [Glycine max]
          Length = 1254

 Score =  500 bits (1287), Expect = e-139
 Identities = 250/292 (85%), Positives = 267/292 (91%), Gaps = 1/292 (0%)
 Frame = -2

Query: 875 MDPARTPLGQMLLEEITPVVMVLSTPSVEEACLKNGFSFLQMLTPFCSFNNIDVPVRTAS 696
           MDPA TPLGQMLLEEITPVVM+LSTPSVEEA LKNG SFLQ LTPFCSFNNIDVPVRTAS
Sbjct: 2   MDPAMTPLGQMLLEEITPVVMLLSTPSVEEASLKNGLSFLQTLTPFCSFNNIDVPVRTAS 61

Query: 695 DQPYRLHKFKLRLFYASDVRKPDLKVANEQLEQVITDAGEKVFSELCSDVPEMNHELASS 516
           DQPYRLHKFKLRLFYASDVRKPD+KVA EQL+QVIT+AGEK FSE CSDV E+NHE +SS
Sbjct: 62  DQPYRLHKFKLRLFYASDVRKPDMKVAKEQLKQVITEAGEKEFSESCSDVSEINHEFSSS 121

Query: 515 -EYRNTPSWFQFFNKELVRIASFSDHEAFDHPVACLLAVSSKDEQPINRFVDLFNTNKLP 339
            EY+NTPSWF+F NKELVR+ASFSDHEAFDHPV CL+AVSSKDEQPI+RFVDLFNTNKLP
Sbjct: 122 SEYQNTPSWFRFLNKELVRVASFSDHEAFDHPVICLVAVSSKDEQPISRFVDLFNTNKLP 181

Query: 338 SLLNDGAMDPKILKHYLLVHDNQDGPADRASKILTEMRSTFGTSDCLLLCINSSPDGPIK 159
           SLLNDGAMDPK+ K YLLVHDNQDGPADRASKILT+MRSTFG SDC LLCINSS D PIK
Sbjct: 182 SLLNDGAMDPKVSKRYLLVHDNQDGPADRASKILTDMRSTFGASDCSLLCINSSLDTPIK 241

Query: 158 HQVNPWASYISDASPSQDLGCFLNIDDINEIKDLMQDLSSKHIIPSMEQKIR 3
            Q NPWASY+S     QDLGCFLNIDDINEIKDLMQDL+SK+IIP+MEQKIR
Sbjct: 242 TQDNPWASYVS----FQDLGCFLNIDDINEIKDLMQDLASKYIIPNMEQKIR 289


>ref|XP_003554470.1| PREDICTED: trafficking protein particle complex subunit 8-like
           isoform 1 [Glycine max]
          Length = 1283

 Score =  500 bits (1287), Expect = e-139
 Identities = 250/292 (85%), Positives = 267/292 (91%), Gaps = 1/292 (0%)
 Frame = -2

Query: 875 MDPARTPLGQMLLEEITPVVMVLSTPSVEEACLKNGFSFLQMLTPFCSFNNIDVPVRTAS 696
           MDPA TPLGQMLLEEITPVVM+LSTPSVEEA LKNG SFLQ LTPFCSFNNIDVPVRTAS
Sbjct: 2   MDPAMTPLGQMLLEEITPVVMLLSTPSVEEASLKNGLSFLQTLTPFCSFNNIDVPVRTAS 61

Query: 695 DQPYRLHKFKLRLFYASDVRKPDLKVANEQLEQVITDAGEKVFSELCSDVPEMNHELASS 516
           DQPYRLHKFKLRLFYASDVRKPD+KVA EQL+QVIT+AGEK FSE CSDV E+NHE +SS
Sbjct: 62  DQPYRLHKFKLRLFYASDVRKPDMKVAKEQLKQVITEAGEKEFSESCSDVSEINHEFSSS 121

Query: 515 -EYRNTPSWFQFFNKELVRIASFSDHEAFDHPVACLLAVSSKDEQPINRFVDLFNTNKLP 339
            EY+NTPSWF+F NKELVR+ASFSDHEAFDHPV CL+AVSSKDEQPI+RFVDLFNTNKLP
Sbjct: 122 SEYQNTPSWFRFLNKELVRVASFSDHEAFDHPVICLVAVSSKDEQPISRFVDLFNTNKLP 181

Query: 338 SLLNDGAMDPKILKHYLLVHDNQDGPADRASKILTEMRSTFGTSDCLLLCINSSPDGPIK 159
           SLLNDGAMDPK+ K YLLVHDNQDGPADRASKILT+MRSTFG SDC LLCINSS D PIK
Sbjct: 182 SLLNDGAMDPKVSKRYLLVHDNQDGPADRASKILTDMRSTFGASDCSLLCINSSLDTPIK 241

Query: 158 HQVNPWASYISDASPSQDLGCFLNIDDINEIKDLMQDLSSKHIIPSMEQKIR 3
            Q NPWASY+S     QDLGCFLNIDDINEIKDLMQDL+SK+IIP+MEQKIR
Sbjct: 242 TQDNPWASYVS----FQDLGCFLNIDDINEIKDLMQDLASKYIIPNMEQKIR 289


>ref|XP_003554472.1| PREDICTED: trafficking protein particle complex subunit 8-like
           isoform 3 [Glycine max]
          Length = 1257

 Score =  495 bits (1275), Expect = e-138
 Identities = 250/293 (85%), Positives = 267/293 (91%), Gaps = 2/293 (0%)
 Frame = -2

Query: 875 MDPARTPLGQMLLEEITPVVMVLSTPSVEEACLKNGFSFLQMLTPFCSFNNIDVPVRTAS 696
           MDPA TPLGQMLLEEITPVVM+LSTPSVEEA LKNG SFLQ LTPFCSFNNIDVPVRTAS
Sbjct: 2   MDPAMTPLGQMLLEEITPVVMLLSTPSVEEASLKNGLSFLQTLTPFCSFNNIDVPVRTAS 61

Query: 695 DQPYRLHKFKLRLFYASDVRKPDLKVANEQLEQVITDAGEKVFSELCSDVPEMNHELASS 516
           DQPYRLHKFKLRLFYASDVRKPD+KVA EQL+QVIT+AGEK FSE CSDV E+NHE +SS
Sbjct: 62  DQPYRLHKFKLRLFYASDVRKPDMKVAKEQLKQVITEAGEKEFSESCSDVSEINHEFSSS 121

Query: 515 -EYRNTPSWFQFFNKELVRIASFSDHEAFDHPVACLLAVSSKDEQPINRFVDLFNTNKLP 339
            EY+NTPSWF+F NKELVR+ASFSDHEAFDHPV CL+AVSSKDEQPI+RFVDLFNTNKLP
Sbjct: 122 SEYQNTPSWFRFLNKELVRVASFSDHEAFDHPVICLVAVSSKDEQPISRFVDLFNTNKLP 181

Query: 338 SLLNDGAMDPKILKHYLLVHDNQDGPADRASKILTEMRSTFGTSDCLLLCINSSPDGPIK 159
           SLLNDGAMDPK+ K YLLVHDNQDGPADRASKILT+MRSTFG SDC LLCINSS D PIK
Sbjct: 182 SLLNDGAMDPKVSKRYLLVHDNQDGPADRASKILTDMRSTFGASDCSLLCINSSLDTPIK 241

Query: 158 HQVNPWASYISDASPSQDLGCFLNIDDINE-IKDLMQDLSSKHIIPSMEQKIR 3
            Q NPWASY+S     QDLGCFLNIDDINE IKDLMQDL+SK+IIP+MEQKIR
Sbjct: 242 TQDNPWASYVS----FQDLGCFLNIDDINEQIKDLMQDLASKYIIPNMEQKIR 290


>ref|XP_002263641.2| PREDICTED: trafficking protein particle complex subunit 8-like
           [Vitis vinifera]
          Length = 1289

 Score =  456 bits (1174), Expect = e-126
 Identities = 221/290 (76%), Positives = 252/290 (86%)
 Frame = -2

Query: 872 DPARTPLGQMLLEEITPVVMVLSTPSVEEACLKNGFSFLQMLTPFCSFNNIDVPVRTASD 693
           DPA +PLG MLL+EITPVVMVL TP VEEACLKNG + +++LTPF +FNNIDVPVRTASD
Sbjct: 9   DPANSPLGLMLLDEITPVVMVLRTPLVEEACLKNGLNLVELLTPFSTFNNIDVPVRTASD 68

Query: 692 QPYRLHKFKLRLFYASDVRKPDLKVANEQLEQVITDAGEKVFSELCSDVPEMNHELASSE 513
           QPYRL KFKLRLFYASD+R+P+L+VA EQL++VIT AGEK FS+LCSD P++   L++ E
Sbjct: 69  QPYRLQKFKLRLFYASDIRQPNLEVAKEQLKEVITHAGEKDFSDLCSDPPQIEDVLSTPE 128

Query: 512 YRNTPSWFQFFNKELVRIASFSDHEAFDHPVACLLAVSSKDEQPINRFVDLFNTNKLPSL 333
               PSWFQFFNKELVR  SFSDHEAFDHPVACLL VS+KDE+P+NRFVDLFNTN+LP L
Sbjct: 129 SEILPSWFQFFNKELVRSLSFSDHEAFDHPVACLLVVSTKDERPLNRFVDLFNTNQLPFL 188

Query: 332 LNDGAMDPKILKHYLLVHDNQDGPADRASKILTEMRSTFGTSDCLLLCINSSPDGPIKHQ 153
           LNDG MDPKILKHYLLVHDNQDG +++A KILTEMRSTFG++DC LLCINSS DG ++H+
Sbjct: 189 LNDGVMDPKILKHYLLVHDNQDGSSEKAEKILTEMRSTFGSNDCQLLCINSSQDGLVEHE 248

Query: 152 VNPWASYISDASPSQDLGCFLNIDDINEIKDLMQDLSSKHIIPSMEQKIR 3
            NPWA Y +DAS SQ LGCFLNIDD NEIKDLMQD SSKHIIP MEQKIR
Sbjct: 249 DNPWAPYKTDASLSQPLGCFLNIDDFNEIKDLMQDFSSKHIIPHMEQKIR 298


Top