BLASTX nr result

ID: Glycyrrhiza23_contig00016719 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00016719
         (293 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003612113.1| Transmembrane and coiled-coil domain-contain...    73   3e-11
ref|XP_003612112.1| Transmembrane and coiled-coil domain-contain...    73   3e-11
ref|XP_003517195.1| PREDICTED: uncharacterized membrane protein ...    71   1e-10
ref|XP_002272351.1| PREDICTED: transmembrane and coiled-coil dom...    59   5e-07
emb|CAN59788.1| hypothetical protein VITISV_012480 [Vitis vinifera]    59   5e-07

>ref|XP_003612113.1| Transmembrane and coiled-coil domain-containing protein [Medicago
           truncatula] gi|355513448|gb|AES95071.1| Transmembrane
           and coiled-coil domain-containing protein [Medicago
           truncatula]
          Length = 447

 Score = 72.8 bits (177), Expect = 3e-11
 Identities = 34/42 (80%), Positives = 37/42 (88%)
 Frame = +3

Query: 168 SPMAAATTSYLTPTQRYAAGALLGLAVHQAQLHQTHPLGLST 293
           SP  + + SYLTPTQRYAAGAL GLA+HQAQLHQTHPLGLST
Sbjct: 6   SPSPSPSPSYLTPTQRYAAGALFGLALHQAQLHQTHPLGLST 47


>ref|XP_003612112.1| Transmembrane and coiled-coil domain-containing protein [Medicago
           truncatula] gi|355513447|gb|AES95070.1| Transmembrane
           and coiled-coil domain-containing protein [Medicago
           truncatula]
          Length = 717

 Score = 72.8 bits (177), Expect = 3e-11
 Identities = 34/42 (80%), Positives = 37/42 (88%)
 Frame = +3

Query: 168 SPMAAATTSYLTPTQRYAAGALLGLAVHQAQLHQTHPLGLST 293
           SP  + + SYLTPTQRYAAGAL GLA+HQAQLHQTHPLGLST
Sbjct: 6   SPSPSPSPSYLTPTQRYAAGALFGLALHQAQLHQTHPLGLST 47


>ref|XP_003517195.1| PREDICTED: uncharacterized membrane protein F35D11.3-like [Glycine
           max]
          Length = 667

 Score = 70.9 bits (172), Expect = 1e-10
 Identities = 34/38 (89%), Positives = 35/38 (92%)
 Frame = +3

Query: 180 AATTSYLTPTQRYAAGALLGLAVHQAQLHQTHPLGLST 293
           AA TSYLT TQRYAAGAL GLA+HQAQLHQTHPLGLST
Sbjct: 2   AAATSYLTGTQRYAAGALFGLALHQAQLHQTHPLGLST 39


>ref|XP_002272351.1| PREDICTED: transmembrane and coiled-coil domain-containing protein
           4 [Vitis vinifera] gi|297735050|emb|CBI17412.3| unnamed
           protein product [Vitis vinifera]
          Length = 662

 Score = 58.5 bits (140), Expect = 5e-07
 Identities = 27/34 (79%), Positives = 31/34 (91%)
 Frame = +3

Query: 189 TSYLTPTQRYAAGALLGLAVHQAQLHQTHPLGLS 290
           +S+LTPTQRYAAGALLGLA+ QAQ+HQT PLG S
Sbjct: 2   SSFLTPTQRYAAGALLGLALQQAQIHQTRPLGSS 35


>emb|CAN59788.1| hypothetical protein VITISV_012480 [Vitis vinifera]
          Length = 670

 Score = 58.5 bits (140), Expect = 5e-07
 Identities = 27/34 (79%), Positives = 31/34 (91%)
 Frame = +3

Query: 189 TSYLTPTQRYAAGALLGLAVHQAQLHQTHPLGLS 290
           +S+LTPTQRYAAGALLGLA+ QAQ+HQT PLG S
Sbjct: 2   SSFLTPTQRYAAGALLGLALQQAQIHQTRPLGSS 35


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