BLASTX nr result

ID: Glycyrrhiza23_contig00016681 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00016681
         (1644 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003557045.1| PREDICTED: uncharacterized protein LOC100783...   247   8e-66
ref|XP_003551446.1| PREDICTED: uncharacterized protein LOC100819...   247   7e-63
gb|ABD32334.2| Polynucleotidyl transferase, Ribonuclease H fold ...   244   6e-62
gb|ABD32757.1| Integrase, catalytic region [Medicago truncatula]      236   1e-59
ref|XP_003596054.1| hypothetical protein MTR_2g065630 [Medicago ...   234   7e-59

>ref|XP_003557045.1| PREDICTED: uncharacterized protein LOC100783177 [Glycine max]
          Length = 2219

 Score =  247 bits (630), Expect(2) = 8e-66
 Identities = 128/337 (37%), Positives = 202/337 (59%), Gaps = 12/337 (3%)
 Frame = -1

Query: 1497 PVNPLQDPMNPYFLSSGDNPALSLVSKPLTANNYHSWARLMHKALVSKNKFKFVDGSIPK 1318
            P +P  DP +P+F+   D P+   V+  L  +NYHSWAR + +AL +K KF+F+DG+IP 
Sbjct: 203  PADPSTDPTSPFFVHPSDGPSSVKVTPLLDGSNYHSWARSLRRALGAKLKFEFLDGTIPM 262

Query: 1317 P-SSFDLSYDAWERCNDIVHSWIVNSVSPQLTQMILYKELASEAWNVLKXXXXXXXXXXX 1141
            P  +FD S+ AW RCN ++HSWI+NSV P +++ I++ + AS+ W  LK           
Sbjct: 263  PVDAFDPSFRAWNRCNMLIHSWILNSVEPSISRSIVFMDNASDVWLDLKERFSQGDLVRV 322

Query: 1140 XDLQHELHQLKQESLSVTEFFTELSNIWEEPDTQCPMPDCTCPVKCTCESMRNARSQREE 961
             ++Q E++ L Q + SVT F+++L  +WEE +   P+P+CTC  +C+C++MR AR     
Sbjct: 323  SEIQQEIYALTQGTRSVTTFYSDLKALWEELEIYMPIPNCTCHHRCSCDAMRLARRHHHT 382

Query: 960  DYIMRFLKGLNDNFAMVKSQFLLMKELPTIDEVFSMVLEHERQNGLIPPPEESQSLINVA 781
             ++MRFL GLND F  VKSQ LL++ LP+I ++FSMV++ ERQN  +P  ++S++L+N +
Sbjct: 383  LHVMRFLTGLNDEFNAVKSQILLIEPLPSITKIFSMVIQFERQN-CVPNLDDSKALVNAS 441

Query: 780  DGK-RPYGRGKGNWTNKQ-CTFCGKGGHTVETCYRKHGYPAGYFNRDSKSSAN------- 628
              K +    G+ N  +K+ CT+C K  H VE C++KHG P       S S+ +       
Sbjct: 442  TSKSQGSANGRSNSGSKRYCTYCHKTNHFVENCFQKHGVPPHMMKNHSGSAHHSAVDGGE 501

Query: 627  --XXXXXXXXXXXXXXXKAITQEELSQLLDVLKKVNV 523
                              ++TQE+L +LL +++  +V
Sbjct: 502  RVESSTASQNTTSVTMTPSLTQEQLDKLLQLIQPPSV 538



 Score = 32.0 bits (71), Expect(2) = 8e-66
 Identities = 17/51 (33%), Positives = 28/51 (54%), Gaps = 3/51 (5%)
 Frame = -2

Query: 428 SQKMIGSGKLKQGLYHLDYGGGPTVSV---VSNISVGTHSHPIPKSILWHY 285
           S KMIG G+ + GLY+L        S    +S+I    ++  IP++ +WH+
Sbjct: 552 SLKMIGLGESRDGLYYLTQTNKECASSNYNISSIFSSANNVHIPENAIWHF 602


>ref|XP_003551446.1| PREDICTED: uncharacterized protein LOC100819074 [Glycine max]
          Length = 1750

 Score =  247 bits (630), Expect = 7e-63
 Identities = 128/337 (37%), Positives = 202/337 (59%), Gaps = 12/337 (3%)
 Frame = -1

Query: 1497 PVNPLQDPMNPYFLSSGDNPALSLVSKPLTANNYHSWARLMHKALVSKNKFKFVDGSIPK 1318
            P +P  DP +P+F+   D P+   V+  L  +NYHSWAR + +AL +K KF+F+DG+IP 
Sbjct: 10   PADPSTDPTSPFFVHPSDGPSSVKVTPLLDGSNYHSWARSLRRALGAKLKFEFLDGTIPM 69

Query: 1317 P-SSFDLSYDAWERCNDIVHSWIVNSVSPQLTQMILYKELASEAWNVLKXXXXXXXXXXX 1141
            P  +FD S+ AW RCN ++HSWI+NSV P +++ I++ + AS+ W  LK           
Sbjct: 70   PVDAFDPSFRAWNRCNMLIHSWILNSVEPSISRSIVFMDNASDVWLDLKERFSQGDLVRV 129

Query: 1140 XDLQHELHQLKQESLSVTEFFTELSNIWEEPDTQCPMPDCTCPVKCTCESMRNARSQREE 961
             ++Q E++ L Q + SVT F+++L  +WEE +   P+P+CTC  +C+C++MR AR     
Sbjct: 130  SEIQQEIYALTQGTRSVTTFYSDLKALWEELEIYMPIPNCTCHHRCSCDAMRLARRHHHT 189

Query: 960  DYIMRFLKGLNDNFAMVKSQFLLMKELPTIDEVFSMVLEHERQNGLIPPPEESQSLINVA 781
             ++MRFL GLND F  VKSQ LL++ LP+I ++FSMV++ ERQN  +P  ++S++L+N +
Sbjct: 190  LHVMRFLTGLNDEFNAVKSQILLIEPLPSITKIFSMVIQFERQN-CVPNLDDSKALVNAS 248

Query: 780  DGK-RPYGRGKGNWTNKQ-CTFCGKGGHTVETCYRKHGYPAGYFNRDSKSSAN------- 628
              K +    G+ N  +K+ CT+C K  H VE C++KHG P       S S+ +       
Sbjct: 249  TSKSQGSANGRSNSGSKRYCTYCHKTNHFVENCFQKHGVPPHMMKNHSGSAHHSAVDGGE 308

Query: 627  --XXXXXXXXXXXXXXXKAITQEELSQLLDVLKKVNV 523
                              ++TQE+L +LL +++  +V
Sbjct: 309  RVESSTASQNTTSVTMTPSLTQEQLDKLLQLIQPPSV 345



 Score =  132 bits (332), Expect = 3e-28
 Identities = 61/154 (39%), Positives = 94/154 (61%), Gaps = 3/154 (1%)
 Frame = -2

Query: 455 TFLLLLKDHSQKMIGSGKLKQGLYHLDYGGGPTVSV---VSNISVGTHSHPIPKSILWHY 285
           T   + +  S KMIG G+ + GLY+L        S    +S+I    ++  IP++ +WH+
Sbjct: 475 TICSIQEQKSLKMIGLGESRDGLYYLTQTNKECASSNYNISSIFSSANNVHIPENAIWHF 534

Query: 284 SFGHASHAKLGMMSKFFSDVCSNKDLVCDICHFARQRKLPFSVSTSRASVPFELVHLDVW 105
             GH S +++ ++   F  + ++   VCDICHFA+ RKLPF  S  +A   F+L+H D+W
Sbjct: 535 RLGHLSSSRIALLHSQFPFIVNDSSSVCDICHFAKHRKLPFVHSYHKAIKCFDLIHFDIW 594

Query: 104 GPCSLPCIHSYKYFLTIVDDHTHFTWIVLLKQKS 3
           GP S+  +H++ YFLT VDDH+ +TWI L+K KS
Sbjct: 595 GPISIKSVHNHAYFLTAVDDHSRYTWITLMKNKS 628


>gb|ABD32334.2| Polynucleotidyl transferase, Ribonuclease H fold [Medicago
            truncatula]
          Length = 772

 Score =  244 bits (622), Expect = 6e-62
 Identities = 120/277 (43%), Positives = 176/277 (63%), Gaps = 11/277 (3%)
 Frame = -1

Query: 1464 YFLSSGDNPALSLVSKPLTANNYHSWARLMHKALVSKNKFKFVDGSIPKPSSFDLSYDAW 1285
            Y++   + P    V+  LT  NY +W R M +AL +KNKF F+DGS+P P   DL+  AW
Sbjct: 19   YYVHPSEGPNSVTVTPLLTGPNYLAWNRSMKRALGTKNKFVFIDGSVPIPPMDDLNRTAW 78

Query: 1284 ERCNDIVHSWIVNSVSPQLTQMILYKELASEAWNVLKXXXXXXXXXXXXDLQHELHQLKQ 1105
            ERCN+++ SWI+NSVSPQ+ Q I++ E A + W  L+             L+  ++ LKQ
Sbjct: 79   ERCNNLILSWIINSVSPQIAQTIVFHEYAIDVWIELQERFSKVDRIRVASLRSSINNLKQ 138

Query: 1104 ESLSVTEFFTELSNIWEEPDTQCPMPDCTCPVKCTCESMRNARSQREEDYIMRFLKGLND 925
               SV ++FT + ++WEE ++  PMP CTCP  C CESMR AR  R ED +++FL GLND
Sbjct: 139  GDKSVLDYFTSIKSLWEELNSHRPMPMCTCPYPCRCESMRAARDFRMEDQVIQFLTGLND 198

Query: 924  NFAMVKSQFLLMKELPTIDEVFSMVLEHERQNGLIPPP-----EESQSLINVADGKRPYG 760
            +F++VK+Q LL+  LP+I++V+SMV++ E  + +IPP      E+S  L+N +D ++P+ 
Sbjct: 199  SFSVVKTQVLLIDPLPSINKVYSMVIQEE--SNIIPPTSLASNEDSSILVNASDARKPFL 256

Query: 759  RGKGNWT------NKQCTFCGKGGHTVETCYRKHGYP 667
            RGK + T      ++ CTFC +  HTVE CY KH +P
Sbjct: 257  RGKSSGTSQSKNNSRYCTFCRRNNHTVEYCYLKHDFP 293



 Score = 96.7 bits (239), Expect = 2e-17
 Identities = 54/156 (34%), Positives = 79/156 (50%), Gaps = 14/156 (8%)
 Frame = -2

Query: 428 SQKMIGSGKLKQGLYHL-------------DYGGGPTVSVVSN-ISVGTHSHPIPKSILW 291
           +QKMIG G L  GLY L                  PT  +  N +S   +   IP + +W
Sbjct: 482 TQKMIGLGNLCDGLYRLHPFAPASPQAHFISSAVSPTNKMSCNSVSSNNNVSSIPSNAIW 541

Query: 290 HYSFGHASHAKLGMMSKFFSDVCSNKDLVCDICHFARQRKLPFSVSTSRASVPFELVHLD 111
           H+  GH S+ +L MM   +S +  +                 +S+++S+    FEL+H D
Sbjct: 542 HFRLGHLSNQRLSMMHSLYSSITIDNKA--------------YSIASSK----FELLHFD 583

Query: 110 VWGPCSLPCIHSYKYFLTIVDDHTHFTWIVLLKQKS 3
           +WGP S+  +H +KYFLTIVDD + F W++LLK KS
Sbjct: 584 IWGPLSVTSVHGHKYFLTIVDDFSRFLWVILLKNKS 619


>gb|ABD32757.1| Integrase, catalytic region [Medicago truncatula]
          Length = 1157

 Score =  236 bits (603), Expect = 1e-59
 Identities = 128/366 (34%), Positives = 202/366 (55%), Gaps = 16/366 (4%)
 Frame = -1

Query: 1470 NPYFLSSGDNPALSLVSKPLTANNYHSWARLMHKALVSKNKFKFVDGSIPKPSSFDLSYD 1291
            +PY++   D P+  +++  L  +NY +W R M +AL +KNK  F+DGSI  P   DL+  
Sbjct: 13   SPYYIHPSDGPSSLIITPKLNGSNYLAWHRSMQRALGAKNKLVFLDGSISVPDIDDLNRQ 72

Query: 1290 AWERCNDIVHSWIVNSVSPQLTQMILYKELASEAWNVLKXXXXXXXXXXXXDLQHELHQL 1111
            AWERCN ++HSWIVNSV+  + Q I++ + A  AW+ LK             L+  ++ L
Sbjct: 73   AWERCNHLIHSWIVNSVTESIAQTIVFHDTALSAWDDLKECFSKVDRVRVLSLRSTINNL 132

Query: 1110 KQESLSVTEFFTELSNIWEEPDTQCPMPDCTCPVKCTCESMRNARSQREEDYIMRFLKGL 931
            KQ + SV ++F EL  +W+E ++  P+P+CTC   C CES+R A+  R ED I++FL GL
Sbjct: 133  KQGTKSVLDYFIELCTLWDELNSHRPIPNCTCIHPCRCESIRLAKYYRTEDQILQFLTGL 192

Query: 930  NDNFAMVKSQFLLMKELPTIDEVFSMVLEHERQNGLIPPP---EESQSLINVADGKRPYG 760
            ND F++VK+Q LLM  LP I++V+S+V++ E QN +   P   ++S   +N +D ++ Y 
Sbjct: 193  NDTFSVVKTQILLMDPLPPINKVYSLVVQEESQNIVFSTPSISDDSSISVNASDARKFYP 252

Query: 759  RGKGNWT-------NKQCTFCGKGGHTVETCYRKHGYP------AGYFNRDSKSSANXXX 619
            RGKG  +       ++ CTFC +  HT+E CY K+G+P      +   N  S++S     
Sbjct: 253  RGKGTSSTSANKGKDRFCTFCNRYNHTIEFCYLKYGHPNFNKGNSSANNAVSEASDTNNS 312

Query: 618  XXXXXXXXXXXXKAITQEELSQLLDVLKKVNVXXXXXXXXXXXXXAEDHAVNQIHISTAA 439
                         ++TQE+   L+ +L++ N+                   N +H ST +
Sbjct: 313  IGTNDVVAPDSKFSLTQEKYDHLVALLQQANLLSSVSPPTGPIS-------NHVHTSTIS 365

Query: 438  EGPLTE 421
              P T+
Sbjct: 366  SVPDTQ 371



 Score = 94.4 bits (233), Expect = 8e-17
 Identities = 55/152 (36%), Positives = 74/152 (48%), Gaps = 10/152 (6%)
 Frame = -2

Query: 428 SQKMIGSGKLKQGLYHL----DYGGGPTVSVVSNISVG------THSHPIPKSILWHYSF 279
           +++MIG G+   GLY L    D    P+    +N+ V       +H   IP S LWHY  
Sbjct: 483 TKRMIGLGENIHGLYRLVVSADSFQSPSHRFNNNLFVSCNNVSQSHFIVIPNSALWHYRM 542

Query: 278 GHASHAKLGMMSKFFSDVCSNKDLVCDICHFARQRKLPFSVSTSRASVPFELVHLDVWGP 99
           GH SH +L  M  F S                             +S  F+L+H D+WGP
Sbjct: 543 GHLSHQRLSHMQSFLSI----------------------------SSAKFDLLHFDIWGP 574

Query: 98  CSLPCIHSYKYFLTIVDDHTHFTWIVLLKQKS 3
            + P +H++KYFLTIVDD + F WI+LLK KS
Sbjct: 575 LACPSVHNHKYFLTIVDDFSRFVWIILLKNKS 606


>ref|XP_003596054.1| hypothetical protein MTR_2g065630 [Medicago truncatula]
            gi|355485102|gb|AES66305.1| hypothetical protein
            MTR_2g065630 [Medicago truncatula]
          Length = 475

 Score =  234 bits (596), Expect = 7e-59
 Identities = 112/276 (40%), Positives = 172/276 (62%), Gaps = 5/276 (1%)
 Frame = -1

Query: 1479 DPMNPYFLSSGDNPALSLVSKPLTANNYHSWARLMHKALVSKNKFKFVDGSIPKPSSFDL 1300
            D  + +++   + P   +V+ PL  +NY +W+R M +A  +KNK KF+DGS+  P   DL
Sbjct: 9    DSESVFYVHPIEGPNSVIVAPPLDGSNYLAWSRSMIRAFGAKNKLKFIDGSMEIPDEDDL 68

Query: 1299 SYDAWERCNDIVHSWIVNSVSPQLTQMILYKELASEAWNVLKXXXXXXXXXXXXDLQHEL 1120
            +  AWERCN ++ SWI+NSVSPQ+ Q +++ E A +AW+                     
Sbjct: 69   NRSAWERCNHLIQSWIINSVSPQIAQTLVFHENAIDAWS--------------------- 107

Query: 1119 HQLKQESLSVTEFFTELSNIWEEPDTQCPMPDCTCPVKCTCESMRNARSQREEDYIMRFL 940
              L++ S +V E+FTE+  +WEE ++  P+P CTCP  C C +MR AR+ R ED +++FL
Sbjct: 108  -DLRERSKTVLEYFTEMKTLWEELNSHRPIPHCTCPHPCRCAAMREARNFRLEDQVIQFL 166

Query: 939  KGLNDNFAMVKSQFLLMKELPTIDEVFSMVLEHERQN-GLIPPPEESQSLINVADGKRPY 763
             GLND F +VK+Q L++  LP+I++V+S+V++ E  N  L  P +E  SL+N A+ ++P 
Sbjct: 167  TGLNDQFNVVKTQVLMLDPLPSINKVYSLVVQEESNNKSLSSPIDEPLSLVNAAESRKPQ 226

Query: 762  GRGKGNWTN----KQCTFCGKGGHTVETCYRKHGYP 667
            GRG+G        + C+FCGK  HT+E CY+KHG+P
Sbjct: 227  GRGRGYSHGFRPPRHCSFCGKSNHTIEFCYQKHGHP 262


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