BLASTX nr result

ID: Glycyrrhiza23_contig00016617 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00016617
         (942 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003550504.1| PREDICTED: E3 ubiquitin-protein ligase RHF1A...   217   3e-54
ref|XP_003528675.1| PREDICTED: E3 ubiquitin-protein ligase RHF1A...   207   3e-51
gb|AFK43681.1| unknown [Lotus japonicus]                              202   7e-50
ref|XP_003541623.1| PREDICTED: E3 ubiquitin-protein ligase RHF1A...   198   1e-48
ref|XP_002517194.1| protein binding protein, putative [Ricinus c...   166   6e-39

>ref|XP_003550504.1| PREDICTED: E3 ubiquitin-protein ligase RHF1A-like [Glycine max]
          Length = 376

 Score =  217 bits (553), Expect = 3e-54
 Identities = 109/173 (63%), Positives = 123/173 (71%)
 Frame = +3

Query: 390 CSICLEPFSIDDPSTVTCCKHEYHLHCILEWSQRSKECPICWQLLALKDPASQELLAAVE 569
           CSICLEPFS  DP+T+T CKHEYHLHCILEW QRSKECPICWQLL LKDPASQELL AVE
Sbjct: 41  CSICLEPFSTHDPATITSCKHEYHLHCILEWLQRSKECPICWQLLILKDPASQELLNAVE 100

Query: 570 AEKRLRSRPIYSSSFTNSRIPFERLNXXXXXXXXXXXXXXEQIMQHLVAAANRAHYVQRQ 749
           AEKRL SR +YS +F +SR P +RLN              EQ+MQHLV+AA+RA Y+ R 
Sbjct: 101 AEKRLSSRTVYSHAFMDSRSPLQRLNNDQDDSCSDDSDFDEQLMQHLVSAASRARYICRS 160

Query: 750 KRQGSSGAGPSEILVFNSSVHVSGVQSTLXXXXXXXXXXXXXVPFQPPTSAFS 908
           KRQ S GAGPSE+LVFNSS+H SG+Q TL             +  Q PTS FS
Sbjct: 161 KRQRSPGAGPSEVLVFNSSIHASGMQPTLTTSPTSGVPSAAHI--QSPTSTFS 211


>ref|XP_003528675.1| PREDICTED: E3 ubiquitin-protein ligase RHF1A-like [Glycine max]
          Length = 371

 Score =  207 bits (527), Expect = 3e-51
 Identities = 108/175 (61%), Positives = 122/175 (69%)
 Frame = +3

Query: 390 CSICLEPFSIDDPSTVTCCKHEYHLHCILEWSQRSKECPICWQLLALKDPASQELLAAVE 569
           CSICLEPFS  DP+T+T CKHEYHLHCILEWSQRSKECPICWQLL LKDPASQELL AVE
Sbjct: 36  CSICLEPFSTHDPATITSCKHEYHLHCILEWSQRSKECPICWQLLILKDPASQELLNAVE 95

Query: 570 AEKRLRSRPIYSSSFTNSRIPFERLNXXXXXXXXXXXXXXEQIMQHLVAAANRAHYVQRQ 749
           AEKRL SR +YS +FT+SR P  R                EQ+ QHLV+AA+RA Y+ R 
Sbjct: 96  AEKRLSSRTVYSHAFTDSRSPLHR----QIILSQDDSDFDEQLTQHLVSAASRARYICRG 151

Query: 750 KRQGSSGAGPSEILVFNSSVHVSGVQSTLXXXXXXXXXXXXXVPFQPPTSAFSPI 914
           +RQ S GAGPSE+LVFNSS+H SG+QSTL                 P TSAFS +
Sbjct: 152 ERQRSPGAGPSEVLVFNSSMHASGMQSTLTTSPSSGV---------PSTSAFSSV 197


>gb|AFK43681.1| unknown [Lotus japonicus]
          Length = 365

 Score =  202 bits (515), Expect = 7e-50
 Identities = 117/189 (61%), Positives = 126/189 (66%), Gaps = 5/189 (2%)
 Frame = +3

Query: 390 CSICLEPFSIDDPSTVTCCKHEYHLHCILEWSQRSKECPICWQLLALKDPASQELLAAVE 569
           CSICLE  ++ DPSTVTCCKHEYHLHCILEWSQRSKECPICWQ LALKDPASQELLAAVE
Sbjct: 21  CSICLESLNVHDPSTVTCCKHEYHLHCILEWSQRSKECPICWQSLALKDPASQELLAAVE 80

Query: 570 AEKRLRSRPIYSSSFTNSRIPFERLNXXXXXXXXXXXXXXEQIMQHLVAAANRAHYVQRQ 749
           AEKRLRSR + SSSF NS     RLN              EQIMQHLVAAA+RA +V RQ
Sbjct: 81  AEKRLRSRNVNSSSFANS-----RLNDGHDGSYSEECDFDEQIMQHLVAAASRARFVHRQ 135

Query: 750 KRQGSSGAGPSEILVFNSSVHVSGVQST-----LXXXXXXXXXXXXXVPFQPPTSAFSPI 914
           +R+GS+GAGPS     NSSVHV   Q T     L             V  QPPT    P+
Sbjct: 136 ERRGSAGAGPSA----NSSVHVRREQPTPTTTSLSQGSSPTSGVPSNVNNQPPT----PV 187

Query: 915 VDEEVVRNT 941
           VD EV RNT
Sbjct: 188 VD-EVARNT 195


>ref|XP_003541623.1| PREDICTED: E3 ubiquitin-protein ligase RHF1A-like [Glycine max]
          Length = 359

 Score =  198 bits (504), Expect = 1e-48
 Identities = 106/178 (59%), Positives = 119/178 (66%), Gaps = 4/178 (2%)
 Frame = +3

Query: 390 CSICLEPFSIDDPSTVTCCKHEYHLHCILEWSQRSKECPICWQLLALKDPASQELLAAVE 569
           CSICLEPFS+ DPSTVTCCKHEYHLHCI+EWSQRSKECPICWQ LALKDPASQELLAAVE
Sbjct: 34  CSICLEPFSVHDPSTVTCCKHEYHLHCIIEWSQRSKECPICWQSLALKDPASQELLAAVE 93

Query: 570 AEKRLRSRPIYSSSFTNSRIPFERLNXXXXXXXXXXXXXXEQIMQHLVAAANRAHYVQRQ 749
            EK +RSR I      NSR P  +LN              +QIM+ LV+AA RAH+VQRQ
Sbjct: 94  DEKCMRSRNI-----ANSRAPLGQLNESHDDSCSDDSDFDDQIMKRLVSAARRAHFVQRQ 148

Query: 750 KRQGSSGAGPSEILVFNSSVHVSGVQSTLXXXXXXXXXXXXXVP----FQPPTSAFSP 911
           +R+ S  AGPSE L  NSS+HVS VQ+TL             VP     QPP    +P
Sbjct: 149 ERKRSPSAGPSEALGVNSSMHVSEVQTTLTTSSSGGSLPASGVPSTVSIQPPALNTTP 206


>ref|XP_002517194.1| protein binding protein, putative [Ricinus communis]
           gi|223543829|gb|EEF45357.1| protein binding protein,
           putative [Ricinus communis]
          Length = 414

 Score =  166 bits (421), Expect = 6e-39
 Identities = 85/148 (57%), Positives = 102/148 (68%)
 Frame = +3

Query: 390 CSICLEPFSIDDPSTVTCCKHEYHLHCILEWSQRSKECPICWQLLALKDPASQELLAAVE 569
           CSICLEPF+  +PSTVT CKHEYHL CILEWSQRSKECPICWQLL L++PA QELLAAVE
Sbjct: 54  CSICLEPFTSQNPSTVTSCKHEYHLQCILEWSQRSKECPICWQLLVLQEPACQELLAAVE 113

Query: 570 AEKRLRSRPIYSSSFTNSRIPFERLNXXXXXXXXXXXXXXEQIMQHLVAAANRAHYVQRQ 749
            E+RLRSR   S++F+N     E ++              E+IMQHL A A+RA Y+ R+
Sbjct: 114 TERRLRSRNTPSAAFSNPTRFHEDID-VEQDSYSDDSDFDERIMQHLAAVASRARYICRR 172

Query: 750 KRQGSSGAGPSEILVFNSSVHVSGVQST 833
           +RQ SSG GPS  L+F S  +    Q T
Sbjct: 173 ERQRSSGQGPSRALIFPSPTNEPSAQQT 200


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