BLASTX nr result

ID: Glycyrrhiza23_contig00016607 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00016607
         (524 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFK44009.1| unknown [Lotus japonicus]                              214   8e-54
ref|XP_003518992.1| PREDICTED: E3 ubiquitin-protein ligase RING1...   212   3e-53
ref|XP_003556948.1| PREDICTED: E3 ubiquitin-protein ligase RING1...   207   6e-52
gb|ACU24187.1| unknown [Glycine max]                                  207   6e-52
ref|XP_002308856.1| predicted protein [Populus trichocarpa] gi|2...   196   2e-48

>gb|AFK44009.1| unknown [Lotus japonicus]
          Length = 293

 Score =  214 bits (544), Expect = 8e-54
 Identities = 100/126 (79%), Positives = 111/126 (88%)
 Frame = -1

Query: 380 MSNSRNTHWCYNCRRPVRLGRRNVVCPSCNEGFVQELNDMVPASPLDFFGLDSNEERGQR 201
           MSNSRNTHWC++CRRPVRLG R+ +C SCNEGFVQEL+DMVP +PLD  GLD+NEE GQR
Sbjct: 1   MSNSRNTHWCHSCRRPVRLGWRDSICRSCNEGFVQELDDMVPVNPLDLVGLDNNEEHGQR 60

Query: 200 YGLMETFSAFMRHQMADRSHGGGHDMRARSDSIPEHGPGFAPLLIFGGQIPFRLSGHGGI 21
           +GLMETFS FMRHQM +RSH   HD+RA+ DSIPE G GFAPLLIFGGQIPFRLSGHGGI
Sbjct: 61  FGLMETFSGFMRHQMGNRSH--RHDIRAQPDSIPEQGAGFAPLLIFGGQIPFRLSGHGGI 118

Query: 20  EALFNG 3
           EALFNG
Sbjct: 119 EALFNG 124


>ref|XP_003518992.1| PREDICTED: E3 ubiquitin-protein ligase RING1-like [Glycine max]
          Length = 309

 Score =  212 bits (539), Expect = 3e-53
 Identities = 100/126 (79%), Positives = 108/126 (85%)
 Frame = -1

Query: 380 MSNSRNTHWCYNCRRPVRLGRRNVVCPSCNEGFVQELNDMVPASPLDFFGLDSNEERGQR 201
           MSNSRNTHWCY+CRRPV LGRR+ VCPSCNEGFV ELNDMV  +P D F +D+NEER QR
Sbjct: 1   MSNSRNTHWCYSCRRPVWLGRRDAVCPSCNEGFVHELNDMVHVNPFDLFEMDNNEERDQR 60

Query: 200 YGLMETFSAFMRHQMADRSHGGGHDMRARSDSIPEHGPGFAPLLIFGGQIPFRLSGHGGI 21
            GLMETFSAFMRHQMADR  G  HD+RA++DS PEH  GFAPLLIFGGQIPFRLSGHGG 
Sbjct: 61  LGLMETFSAFMRHQMADR--GRSHDIRAQTDSNPEHSAGFAPLLIFGGQIPFRLSGHGGF 118

Query: 20  EALFNG 3
           EALFNG
Sbjct: 119 EALFNG 124


>ref|XP_003556948.1| PREDICTED: E3 ubiquitin-protein ligase RING1-like isoform 1
           [Glycine max] gi|356577674|ref|XP_003556949.1|
           PREDICTED: E3 ubiquitin-protein ligase RING1-like
           isoform 2 [Glycine max]
          Length = 309

 Score =  207 bits (528), Expect = 6e-52
 Identities = 98/126 (77%), Positives = 106/126 (84%)
 Frame = -1

Query: 380 MSNSRNTHWCYNCRRPVRLGRRNVVCPSCNEGFVQELNDMVPASPLDFFGLDSNEERGQR 201
           MSNSRNTHWCY+CRRPVRLGRR+VVCPSCN GFV ELND+V  +P D FG+D+NEER QR
Sbjct: 1   MSNSRNTHWCYSCRRPVRLGRRDVVCPSCNLGFVHELNDIVHVNPFDLFGMDNNEERDQR 60

Query: 200 YGLMETFSAFMRHQMADRSHGGGHDMRARSDSIPEHGPGFAPLLIFGGQIPFRLSGHGGI 21
            GLMETFSAFMRHQMADR  G  HD+R R+DS PEH   FAPLLIFGG IPFRLS HGG 
Sbjct: 61  LGLMETFSAFMRHQMADR--GRSHDIRVRTDSNPEHSASFAPLLIFGGHIPFRLSRHGGF 118

Query: 20  EALFNG 3
           EALFNG
Sbjct: 119 EALFNG 124


>gb|ACU24187.1| unknown [Glycine max]
          Length = 309

 Score =  207 bits (528), Expect = 6e-52
 Identities = 98/126 (77%), Positives = 106/126 (84%)
 Frame = -1

Query: 380 MSNSRNTHWCYNCRRPVRLGRRNVVCPSCNEGFVQELNDMVPASPLDFFGLDSNEERGQR 201
           MSNSRNTHWCY+CRRPVRLGRR+VVCPSCN GFV ELND+V  +P D FG+D+NEER QR
Sbjct: 1   MSNSRNTHWCYSCRRPVRLGRRDVVCPSCNLGFVHELNDIVHVNPFDLFGMDNNEERDQR 60

Query: 200 YGLMETFSAFMRHQMADRSHGGGHDMRARSDSIPEHGPGFAPLLIFGGQIPFRLSGHGGI 21
            GLMETFSAFMRHQMADR  G  HD+R R+DS PEH   FAPLLIFGG IPFRLS HGG 
Sbjct: 61  LGLMETFSAFMRHQMADR--GRSHDIRVRTDSNPEHSASFAPLLIFGGHIPFRLSRHGGF 118

Query: 20  EALFNG 3
           EALFNG
Sbjct: 119 EALFNG 124


>ref|XP_002308856.1| predicted protein [Populus trichocarpa] gi|222854832|gb|EEE92379.1|
           predicted protein [Populus trichocarpa]
          Length = 311

 Score =  196 bits (497), Expect = 2e-48
 Identities = 90/128 (70%), Positives = 107/128 (83%)
 Frame = -1

Query: 386 KRMSNSRNTHWCYNCRRPVRLGRRNVVCPSCNEGFVQELNDMVPASPLDFFGLDSNEERG 207
           KRMS+SRNTHWCY+CRRPVRL  R+  CP C+ GFVQEL+DM   +PLDFFG+D +++  
Sbjct: 2   KRMSSSRNTHWCYSCRRPVRLRGRDAACPYCSGGFVQELDDMHRINPLDFFGMDGDDDHD 61

Query: 206 QRYGLMETFSAFMRHQMADRSHGGGHDMRARSDSIPEHGPGFAPLLIFGGQIPFRLSGHG 27
             +GLME FSAFMR +MADRSH   HD+R+RSDSIPEH PGF PLLIFGGQIPFRLSG+G
Sbjct: 62  NMFGLMEAFSAFMRQRMADRSH--NHDIRSRSDSIPEHNPGFGPLLIFGGQIPFRLSGNG 119

Query: 26  GIEALFNG 3
           G+EALF+G
Sbjct: 120 GLEALFSG 127


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