BLASTX nr result

ID: Glycyrrhiza23_contig00016551 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00016551
         (1067 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003531368.1| PREDICTED: probable ribosome biogenesis prot...   442   e-122
gb|ACU23167.1| unknown [Glycine max]                                  442   e-122
ref|XP_003525067.1| PREDICTED: probable ribosome biogenesis prot...   436   e-120
ref|XP_003630080.1| Putative metal-binding domain in RNase L inh...   431   e-118
ref|XP_002528990.1| conserved hypothetical protein [Ricinus comm...   358   1e-96

>ref|XP_003531368.1| PREDICTED: probable ribosome biogenesis protein C16orf42 homolog
           [Glycine max]
          Length = 270

 Score =  442 bits (1136), Expect = e-122
 Identities = 222/260 (85%), Positives = 232/260 (89%), Gaps = 2/260 (0%)
 Frame = -1

Query: 905 AESSRHH--QLSLEDECQSSVQXXXXXXXXXXXXXELTQPKIKLAMWDFGQCDAKKCTGR 732
           A+SSRHH  QL LED+ QSS+               LT+PKIKLAMWDFGQCDAKKCTGR
Sbjct: 14  AQSSRHHHQQLLLEDDSQSSLPENGEGEEEEEE---LTEPKIKLAMWDFGQCDAKKCTGR 70

Query: 731 KLSRLGFLKELRVSNGFGGIVLSPVGKQCVSREDYSLIQKKGLAVVDCSWARLDDVPFVR 552
           KLSRLG LKELRVSNGFGGIVLSP G QCVSREDYSLIQKKGLAVVDCSWARLDDVPFVR
Sbjct: 71  KLSRLGMLKELRVSNGFGGIVLSPAGNQCVSREDYSLIQKKGLAVVDCSWARLDDVPFVR 130

Query: 551 LRCTAPRLLPWLVAANPVNYGRPCKLSCVEALSAALTICGEEETANFLLGKFKWGHAFMS 372
           LRCTAPRLLPWLVAANPVNYGRPC+LSCVEALSAALTICGEE+TAN LL KFKWGHAFMS
Sbjct: 131 LRCTAPRLLPWLVAANPVNYGRPCQLSCVEALSAALTICGEEKTANLLLDKFKWGHAFMS 190

Query: 371 LNGELLKAYSNCQNSADIISVQNAWLSQESQIPRAPTDSEVVTHESEDNIQNSSDSEDGL 192
           LNGELL+AYS CQNSA+IISVQNAWLSQESQIPRAPTDSEV T ESED IQNSSDSEDGL
Sbjct: 191 LNGELLRAYSKCQNSAEIISVQNAWLSQESQIPRAPTDSEVTTPESEDKIQNSSDSEDGL 250

Query: 191 PPLERNMNHLNIVNSDEESE 132
           PPLE+NMNHL+IVNSDEESE
Sbjct: 251 PPLEKNMNHLSIVNSDEESE 270


>gb|ACU23167.1| unknown [Glycine max]
          Length = 270

 Score =  442 bits (1136), Expect = e-122
 Identities = 222/260 (85%), Positives = 232/260 (89%), Gaps = 2/260 (0%)
 Frame = -1

Query: 905 AESSRHH--QLSLEDECQSSVQXXXXXXXXXXXXXELTQPKIKLAMWDFGQCDAKKCTGR 732
           A+SSRHH  QL LED+ QSS+               LT+PKIKLAMWDFGQCDAKKCTGR
Sbjct: 14  AQSSRHHHQQLLLEDDSQSSLPENGEGEEEEEE---LTEPKIKLAMWDFGQCDAKKCTGR 70

Query: 731 KLSRLGFLKELRVSNGFGGIVLSPVGKQCVSREDYSLIQKKGLAVVDCSWARLDDVPFVR 552
           KLSRLG LKELRVSNGFGGIVLSP G QCVSREDYSLIQKKGLAVVDCSWARLDDVPFVR
Sbjct: 71  KLSRLGMLKELRVSNGFGGIVLSPAGNQCVSREDYSLIQKKGLAVVDCSWARLDDVPFVR 130

Query: 551 LRCTAPRLLPWLVAANPVNYGRPCKLSCVEALSAALTICGEEETANFLLGKFKWGHAFMS 372
           LRCTAPRLLPWLVAANPVNYGRPC+LSCVEALSAALTICGEE+TAN LL KFKWGHAFMS
Sbjct: 131 LRCTAPRLLPWLVAANPVNYGRPCQLSCVEALSAALTICGEEKTANLLLDKFKWGHAFMS 190

Query: 371 LNGELLKAYSNCQNSADIISVQNAWLSQESQIPRAPTDSEVVTHESEDNIQNSSDSEDGL 192
           LNGELL+AYS CQNSA+IISVQNAWLSQESQIPRAPTDSEV T ESED IQNSSDSEDGL
Sbjct: 191 LNGELLRAYSKCQNSAEIISVQNAWLSQESQIPRAPTDSEVTTPESEDKIQNSSDSEDGL 250

Query: 191 PPLERNMNHLNIVNSDEESE 132
           PPLE+NMNHL+IVNSDEESE
Sbjct: 251 PPLEKNMNHLSIVNSDEESE 270


>ref|XP_003525067.1| PREDICTED: probable ribosome biogenesis protein C16orf42 homolog
           [Glycine max]
          Length = 271

 Score =  436 bits (1120), Expect = e-120
 Identities = 217/260 (83%), Positives = 230/260 (88%), Gaps = 2/260 (0%)
 Frame = -1

Query: 905 AESSRHHQ--LSLEDECQSSVQXXXXXXXXXXXXXELTQPKIKLAMWDFGQCDAKKCTGR 732
           A+SSRHHQ  L LED+ QSS+               LT+PKIKLAMWDFGQCDAK+CTGR
Sbjct: 14  AQSSRHHQQQLLLEDDSQSSLPAENVEGEEEEEE--LTEPKIKLAMWDFGQCDAKRCTGR 71

Query: 731 KLSRLGFLKELRVSNGFGGIVLSPVGKQCVSREDYSLIQKKGLAVVDCSWARLDDVPFVR 552
           KLSRLG LKELRVSNGFGG+VLSP G QCVSREDYSLIQKKGLAVVDCSWARLDDVPF+R
Sbjct: 72  KLSRLGMLKELRVSNGFGGVVLSPAGNQCVSREDYSLIQKKGLAVVDCSWARLDDVPFMR 131

Query: 551 LRCTAPRLLPWLVAANPVNYGRPCKLSCVEALSAALTICGEEETANFLLGKFKWGHAFMS 372
           LRC APRLLPWLVAANPVNYGRPC+LSCVEALSAALTICGEE+TAN LL KFKWGHAFMS
Sbjct: 132 LRCAAPRLLPWLVAANPVNYGRPCQLSCVEALSAALTICGEEKTANLLLDKFKWGHAFMS 191

Query: 371 LNGELLKAYSNCQNSADIISVQNAWLSQESQIPRAPTDSEVVTHESEDNIQNSSDSEDGL 192
           LNGELL+AYS CQNSA+IISVQNAWLSQESQIPRAPTDSEV T ESED IQNSSDSEDGL
Sbjct: 192 LNGELLRAYSKCQNSAEIISVQNAWLSQESQIPRAPTDSEVTTPESEDKIQNSSDSEDGL 251

Query: 191 PPLERNMNHLNIVNSDEESE 132
           PPLE+NMNHL+I NSDEESE
Sbjct: 252 PPLEKNMNHLSIANSDEESE 271


>ref|XP_003630080.1| Putative metal-binding domain in RNase L inhibitor RLI family
           protein [Medicago truncatula]
           gi|355524102|gb|AET04556.1| Putative metal-binding
           domain in RNase L inhibitor RLI family protein [Medicago
           truncatula]
          Length = 273

 Score =  431 bits (1108), Expect = e-118
 Identities = 216/275 (78%), Positives = 230/275 (83%)
 Frame = -1

Query: 956 MGGNNXXXXXXXXXXXHAESSRHHQLSLEDECQSSVQXXXXXXXXXXXXXELTQPKIKLA 777
           MGGNN           HA+SSRH+QLSL++E QS VQ              L QPKIKLA
Sbjct: 1   MGGNNRQHRFRNHRPNHAQSSRHNQLSLDNENQSCVQEPCEGDNEESDE--LAQPKIKLA 58

Query: 776 MWDFGQCDAKKCTGRKLSRLGFLKELRVSNGFGGIVLSPVGKQCVSREDYSLIQKKGLAV 597
           MWDFGQCDAKKCTGRKLSRLGFLKELRV+NGFGGI LSPVG QCVSREDYSLIQ KGLAV
Sbjct: 59  MWDFGQCDAKKCTGRKLSRLGFLKELRVTNGFGGIALSPVGTQCVSREDYSLIQNKGLAV 118

Query: 596 VDCSWARLDDVPFVRLRCTAPRLLPWLVAANPVNYGRPCKLSCVEALSAALTICGEEETA 417
           VDCSWARLDDVPFV+LRC APRLLPWLVAANP+NYGRPC+LSCVEAL+AALTICGEEETA
Sbjct: 119 VDCSWARLDDVPFVKLRCAAPRLLPWLVAANPINYGRPCQLSCVEALAAALTICGEEETA 178

Query: 416 NFLLGKFKWGHAFMSLNGELLKAYSNCQNSADIISVQNAWLSQESQIPRAPTDSEVVTHE 237
           N LLGKF WGHAF SLN ELLKAYS CQNSA+IISVQN WLSQ  Q+P+APTDSEVV  E
Sbjct: 179 NLLLGKFNWGHAFSSLNKELLKAYSKCQNSAEIISVQNDWLSQARQVPKAPTDSEVVKQE 238

Query: 236 SEDNIQNSSDSEDGLPPLERNMNHLNIVNSDEESE 132
           +EDN QNSSDS+DGLPPLERNMNHL I NSDEESE
Sbjct: 239 NEDNDQNSSDSDDGLPPLERNMNHLTIENSDEESE 273


>ref|XP_002528990.1| conserved hypothetical protein [Ricinus communis]
           gi|223531580|gb|EEF33409.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 285

 Score =  358 bits (919), Expect = 1e-96
 Identities = 180/271 (66%), Positives = 209/271 (77%)
 Frame = -1

Query: 950 GNNXXXXXXXXXXXHAESSRHHQLSLEDECQSSVQXXXXXXXXXXXXXELTQPKIKLAMW 771
           G+N             +SSR + L  EDE   S Q               + P+++LAMW
Sbjct: 2   GHNKPRRSKSHHSNRGQSSRTNLLEREDESLPSDQVPEEDTN--------STPRVQLAMW 53

Query: 770 DFGQCDAKKCTGRKLSRLGFLKELRVSNGFGGIVLSPVGKQCVSREDYSLIQKKGLAVVD 591
           DFGQCDAK+CTGRKL R G LKELRV+ GFGGIVLSPVG QCVS++D+SLI++KGLAVVD
Sbjct: 54  DFGQCDAKRCTGRKLGRFGLLKELRVNCGFGGIVLSPVGSQCVSKQDHSLIKRKGLAVVD 113

Query: 590 CSWARLDDVPFVRLRCTAPRLLPWLVAANPVNYGRPCKLSCVEALSAALTICGEEETANF 411
           CSWARL+DVPFV+LRC APRLLPWLVAANPVNYGRPC+LSCVEALSAAL ICGEEETA+ 
Sbjct: 114 CSWARLNDVPFVKLRCAAPRLLPWLVAANPVNYGRPCELSCVEALSAALIICGEEETADL 173

Query: 410 LLGKFKWGHAFMSLNGELLKAYSNCQNSADIISVQNAWLSQESQIPRAPTDSEVVTHESE 231
           LL KFKWGHAF+SLN ELLKAYS C+NSADIISVQN WLSQ+S++P+A  DSE    E+ 
Sbjct: 174 LLNKFKWGHAFLSLNRELLKAYSECENSADIISVQNGWLSQQSKVPKAVPDSEEA--ETS 231

Query: 230 DNIQNSSDSEDGLPPLERNMNHLNIVNSDEE 138
            +  + SDSEDGLPPLERNMNHLN  +SDE+
Sbjct: 232 KDEGSCSDSEDGLPPLERNMNHLNFEDSDED 262


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