BLASTX nr result

ID: Glycyrrhiza23_contig00016547 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00016547
         (272 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003547649.1| PREDICTED: F-box/kelch-repeat protein At3g27...    75   6e-17
ref|XP_003553251.1| PREDICTED: F-box/kelch-repeat protein At3g27...    68   9e-15
ref|NP_198884.1| kelch repeat-containing protein [Arabidopsis th...    59   3e-09
ref|XP_002273717.1| PREDICTED: F-box/kelch-repeat protein At3g27...    62   2e-08
ref|XP_002870686.1| kelch repeat-containing F-box family protein...    57   3e-08

>ref|XP_003547649.1| PREDICTED: F-box/kelch-repeat protein At3g27150-like [Glycine max]
          Length = 404

 Score = 75.5 bits (184), Expect(2) = 6e-17
 Identities = 34/50 (68%), Positives = 40/50 (80%)
 Frame = -1

Query: 272 QRGWGIAFKSLGDELLVIGAPCVNQTTERASAIYACCPDPSVEKLRWSKL 123
           QRGWG+AFKSLGDELLVIGAP V+ T   A ++Y CCPDP  EKLRW ++
Sbjct: 337 QRGWGVAFKSLGDELLVIGAPSVSHTV-HALSMYTCCPDPDDEKLRWRQI 385



 Score = 36.6 bits (83), Expect(2) = 6e-17
 Identities = 20/23 (86%), Positives = 20/23 (86%)
 Frame = -3

Query: 129 QIECGSTIQLNHFIRNCAVVMGT 61
           QI CGS IQLNHFIRNCA VMGT
Sbjct: 384 QIGCGS-IQLNHFIRNCA-VMGT 404


>ref|XP_003553251.1| PREDICTED: F-box/kelch-repeat protein At3g27150-like [Glycine max]
          Length = 375

 Score = 68.2 bits (165), Expect(2) = 9e-15
 Identities = 31/50 (62%), Positives = 37/50 (74%)
 Frame = -1

Query: 272 QRGWGIAFKSLGDELLVIGAPCVNQTTERASAIYACCPDPSVEKLRWSKL 123
           Q GWG+AFKSLGDELLVIGAP +      A ++Y CCPDP  EKLRW ++
Sbjct: 308 QGGWGVAFKSLGDELLVIGAPSMPHIV-HALSMYTCCPDPDDEKLRWRQI 356



 Score = 36.6 bits (83), Expect(2) = 9e-15
 Identities = 20/23 (86%), Positives = 20/23 (86%)
 Frame = -3

Query: 129 QIECGSTIQLNHFIRNCAVVMGT 61
           QI CGS IQLNHFIRNCA VMGT
Sbjct: 355 QIGCGS-IQLNHFIRNCA-VMGT 375


>ref|NP_198884.1| kelch repeat-containing protein [Arabidopsis thaliana]
           gi|9758096|dbj|BAB08540.1| unnamed protein product
           [Arabidopsis thaliana] gi|332007198|gb|AED94581.1| kelch
           repeat-containing protein [Arabidopsis thaliana]
          Length = 415

 Score = 58.5 bits (140), Expect(2) = 3e-09
 Identities = 24/47 (51%), Positives = 34/47 (72%)
 Frame = -1

Query: 266 GWGIAFKSLGDELLVIGAPCVNQTTERASAIYACCPDPSVEKLRWSK 126
           GWG+AFKS+GD +LVIGA  V ++ +   ++Y CCP P VEK+ W +
Sbjct: 350 GWGVAFKSVGDRILVIGA-SVTKSWDNKMSVYTCCPFPKVEKITWEE 395



 Score = 27.3 bits (59), Expect(2) = 3e-09
 Identities = 11/22 (50%), Positives = 15/22 (68%)
 Frame = -3

Query: 132 EQIECGSTIQLNHFIRNCAVVM 67
           E+  C   +QL HFIRNC V++
Sbjct: 394 EETSC-DCVQLGHFIRNCCVML 414


>ref|XP_002273717.1| PREDICTED: F-box/kelch-repeat protein At3g27150-like [Vitis
           vinifera]
          Length = 437

 Score = 62.4 bits (150), Expect(2) = 2e-08
 Identities = 29/50 (58%), Positives = 34/50 (68%)
 Frame = -1

Query: 269 RGWGIAFKSLGDELLVIGAPCVNQTTERASAIYACCPDPSVEKLRWSKLN 120
           RGWG+AFKSLG+ELLVIGA  V+        IY CCPDP  E+L W  L+
Sbjct: 371 RGWGVAFKSLGNELLVIGASSVS-FAGHGMTIYTCCPDPDAEELLWKPLD 419



 Score = 21.2 bits (43), Expect(2) = 2e-08
 Identities = 6/13 (46%), Positives = 12/13 (92%)
 Frame = -3

Query: 105 QLNHFIRNCAVVM 67
           +L+HFI NC++++
Sbjct: 424 RLSHFILNCSIMI 436


>ref|XP_002870686.1| kelch repeat-containing F-box family protein [Arabidopsis lyrata
           subsp. lyrata] gi|297316522|gb|EFH46945.1| kelch
           repeat-containing F-box family protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 438

 Score = 56.6 bits (135), Expect(2) = 3e-08
 Identities = 23/47 (48%), Positives = 29/47 (61%)
 Frame = -1

Query: 266 GWGIAFKSLGDELLVIGAPCVNQTTERASAIYACCPDPSVEKLRWSK 126
           GWG+AFKS+GD LLVIGA           ++Y C P P VEK+ W +
Sbjct: 372 GWGVAFKSVGDRLLVIGASATQSWDNNTMSVYTCRPSPKVEKIIWEE 418



 Score = 26.2 bits (56), Expect(2) = 3e-08
 Identities = 10/22 (45%), Positives = 16/22 (72%)
 Frame = -3

Query: 132 EQIECGSTIQLNHFIRNCAVVM 67
           E+  C   ++L+HFIRNC V++
Sbjct: 417 EETRCDG-VKLSHFIRNCCVML 437


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