BLASTX nr result

ID: Glycyrrhiza23_contig00016538 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00016538
         (363 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003541988.1| PREDICTED: uncharacterized protein LOC100810...   107   4e-25
ref|XP_002318937.1| chromatin remodeling complex subunit [Populu...    84   2e-14
emb|CBI16338.3| unnamed protein product [Vitis vinifera]               73   3e-11
ref|XP_002282476.2| PREDICTED: uncharacterized protein LOC100258...    69   3e-10
ref|XP_002892431.1| hypothetical protein ARALYDRAFT_470861 [Arab...    66   3e-09

>ref|XP_003541988.1| PREDICTED: uncharacterized protein LOC100810773 [Glycine max]
          Length = 1086

 Score =  107 bits (268), Expect(2) = 4e-25
 Identities = 54/86 (62%), Positives = 65/86 (75%)
 Frame = -1

Query: 363  QYFWTKLLEGKQFQWKYSCSSSQRSRKRVQHFDGSINGPNPVSEGIGIAKKRKKVSNNIL 184
            Q FWTKLLEGKQFQWKY  SSSQRSRK+V HFDGS+NGP+ V+  +G +KKR+K+SNNI+
Sbjct: 979  QIFWTKLLEGKQFQWKYLNSSSQRSRKKVYHFDGSVNGPDLVN--VGASKKRRKISNNIV 1036

Query: 183  DQPXXXXXXXXXXXGIKAGTPADLVD 106
            +QP           GIKAGT  DL+D
Sbjct: 1037 EQPSSKSEDEKLSNGIKAGTSEDLLD 1062



 Score = 32.0 bits (71), Expect(2) = 4e-25
 Identities = 12/26 (46%), Positives = 20/26 (76%)
 Frame = -2

Query: 107  IDLRVMTSNMRKKVECIVSRGAYIFC 30
            +DL+ +  N+ +KV+ ++SRGAY FC
Sbjct: 1061 LDLKEIMLNLSQKVDSMMSRGAYFFC 1086


>ref|XP_002318937.1| chromatin remodeling complex subunit [Populus trichocarpa]
            gi|222857313|gb|EEE94860.1| chromatin remodeling complex
            subunit [Populus trichocarpa]
          Length = 2283

 Score = 83.6 bits (205), Expect = 2e-14
 Identities = 54/149 (36%), Positives = 72/149 (48%), Gaps = 30/149 (20%)
 Frame = -1

Query: 357  FWTKLLEGKQFQWKYSCSSSQRSRKRVQHFDGSINGPNPVSEGIGIAKKRKKVSNNILDQ 178
            FW KLLEGKQ +WKYS   SQR+RKRVQ+ D      N V EG  + KKR KV+NN  + 
Sbjct: 1142 FWKKLLEGKQPRWKYSSGLSQRNRKRVQYADDI--QKNTVVEGDEVVKKRNKVANNSTNS 1199

Query: 177  PXXXXXXXXXXXGIKAGTP------------------------------ADLVDRPQGND 88
            P              +G P                              ++  +  + N 
Sbjct: 1200 PSLKAALIG-----TSGAPVLNMSQFLPSSTGRLNTTATNHVSNFRHSNSNSSEVLKANK 1254

Query: 87   VEYEKKSRVHSEQRSLHLLLKPKITKLCE 1
            VEY ++  +H  ++SLHL+LKP+ITKLCE
Sbjct: 1255 VEYNERMNLHDSEKSLHLILKPEITKLCE 1283


>emb|CBI16338.3| unnamed protein product [Vitis vinifera]
          Length = 1452

 Score = 72.8 bits (177), Expect = 3e-11
 Identities = 47/129 (36%), Positives = 66/129 (51%), Gaps = 10/129 (7%)
 Frame = -1

Query: 357  FWTKLLEGKQFQWKYSCSSSQRSRKRVQHFDGSINGPNPVSEGIGIAKKRKKVSNNIL-- 184
            FWTKLLEG+  QWKYS   SQR+RKRVQ+FD S        E   + KKR+KV    L  
Sbjct: 1239 FWTKLLEGRYPQWKYSSGPSQRNRKRVQYFDES--SKRSEHESDEVVKKRRKVDKGKLVT 1296

Query: 183  ---DQPXXXXXXXXXXXGIKAGTPADLVD-----RPQGNDVEYEKKSRVHSEQRSLHLLL 28
               +               +A T   LV        + + +E+E + ++   Q+SLHL+L
Sbjct: 1297 GDKEGKWPTACTHDALHANRASTSPPLVSDISEASSEIHTIEFEGRRKLRDAQKSLHLVL 1356

Query: 27   KPKITKLCE 1
            +  I+KLC+
Sbjct: 1357 ETDISKLCD 1365


>ref|XP_002282476.2| PREDICTED: uncharacterized protein LOC100258707 [Vitis vinifera]
          Length = 1534

 Score = 69.3 bits (168), Expect = 3e-10
 Identities = 48/147 (32%), Positives = 67/147 (45%), Gaps = 28/147 (19%)
 Frame = -1

Query: 357 FWTKLLEGKQFQWKYSCSSSQRSRKRVQHFDGSINGPNPVSEGIGIAKKRKKVSNNILDQ 178
           FWTKLLEG+  QWKYS   SQR+RKRVQ+FD S        E   + KKR+KV     D+
Sbjct: 559 FWTKLLEGRYPQWKYSSGPSQRNRKRVQYFDES--SKRSEHESDEVVKKRRKV-----DK 611

Query: 177 PXXXXXXXXXXXGIKAGTPADLVDRPQG----------------------------NDVE 82
                       GI A   +  + RP                              + +E
Sbjct: 612 GKLVTGDKEGASGISANNESQSLSRPTACTHDALHANRASTSPPLVSDISEASSEIHTIE 671

Query: 81  YEKKSRVHSEQRSLHLLLKPKITKLCE 1
           +E + ++   Q+SLHL+L+  I+KLC+
Sbjct: 672 FEGRRKLRDAQKSLHLVLETDISKLCD 698


>ref|XP_002892431.1| hypothetical protein ARALYDRAFT_470861 [Arabidopsis lyrata subsp.
            lyrata] gi|297338273|gb|EFH68690.1| hypothetical protein
            ARALYDRAFT_470861 [Arabidopsis lyrata subsp. lyrata]
          Length = 2034

 Score = 65.9 bits (159), Expect = 3e-09
 Identities = 33/61 (54%), Positives = 42/61 (68%)
 Frame = -1

Query: 357  FWTKLLEGKQFQWKYSCSSSQRSRKRVQHFDGSINGPNPVSEGIGIAKKRKKVSNNILDQ 178
            FWTKLL GK   WKY   + QR+RKRVQ+F+GS   P  + +G G AKKRKK S+++ D 
Sbjct: 840  FWTKLLGGKNPMWKYPSDTPQRNRKRVQYFEGSEESPK-IGDG-GNAKKRKKASDDVTDP 897

Query: 177  P 175
            P
Sbjct: 898  P 898


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