BLASTX nr result

ID: Glycyrrhiza23_contig00016512 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00016512
         (1123 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003548758.1| PREDICTED: GATA transcription factor 9-like ...   359   6e-97
ref|XP_003554005.1| PREDICTED: GATA transcription factor 9-like ...   356   7e-96
gb|ACU17869.1| unknown [Glycine max]                                  354   3e-95
ref|XP_003624611.1| GATA transcription factor [Medicago truncatu...   335   9e-90
ref|XP_003548060.1| PREDICTED: GATA transcription factor 9-like ...   332   1e-88

>ref|XP_003548758.1| PREDICTED: GATA transcription factor 9-like [Glycine max]
          Length = 281

 Score =  359 bits (922), Expect = 6e-97
 Identities = 195/284 (68%), Positives = 210/284 (73%), Gaps = 18/284 (6%)
 Frame = -3

Query: 986 MNMDVCQNE---------KVLAPSCSNLSTTLDDLFSAQNTEVDVEMEWLSVFVEDCFSS 834
           MNMD+CQN          +V APSCS+   +LDDLFSAQNTEVDVE+EWLS FVEDCFSS
Sbjct: 1   MNMDMCQNVSVSGECQQVQVFAPSCSS---SLDDLFSAQNTEVDVELEWLSEFVEDCFSS 57

Query: 833 PPSCVLVPSGVVQNTGTITSKPSGGTILKRPTRENESPLQKFSVPGKARSKRKRLSAPRT 654
           PPSCVLVP GV + T T ++  S    LKRP ++NE PLQ F+VPGKARSKRKRLSAPRT
Sbjct: 58  PPSCVLVPVGV-KTTSTKSTSTSINPSLKRPQQQNEPPLQNFAVPGKARSKRKRLSAPRT 116

Query: 653 TTNKDPLSIWSHHLNPKNEAFSSDPPLLKQAYWLADSELINVPYKHKD-------IDVDE 495
             NKDPLSIWSHHLNP+NEA  SDPPLLKQAYWLADSELI    K K+       I   E
Sbjct: 117 --NKDPLSIWSHHLNPQNEALCSDPPLLKQAYWLADSELIMPKPKDKEEQQEEVVIMAKE 174

Query: 494 KEEKGV--VMSXXXXXXXXXXXXXXXXVIPMPRRCTHCLAQRTPQWRAGPLGPKTLCNAC 321
            EEK +  V                    PMPRRCTHCLAQRTPQWRAGPLGPKTLCNAC
Sbjct: 175 DEEKVIINVSKEISFGDSELDEGSNGQQQPMPRRCTHCLAQRTPQWRAGPLGPKTLCNAC 234

Query: 320 GVRYKSGRLLPEYRPAKSPTFVSYLHSNSHKKVMEMRMAVPSSS 189
           GVRYKSGRLLPEYRPAKSPTFVSYLHSNSHKKVMEMRM+V S S
Sbjct: 235 GVRYKSGRLLPEYRPAKSPTFVSYLHSNSHKKVMEMRMSVYSIS 278


>ref|XP_003554005.1| PREDICTED: GATA transcription factor 9-like [Glycine max]
          Length = 274

 Score =  356 bits (913), Expect = 7e-96
 Identities = 191/277 (68%), Positives = 214/277 (77%), Gaps = 12/277 (4%)
 Frame = -3

Query: 986 MNMDVCQNE---------KVLAPSCSNLSTTLDDLFSAQNTEVDVEMEWLSVFVEDCFSS 834
           MNMD+CQN          +V APSCS+   +LDDLFSAQNTEVDVE+EWLS FVEDCFSS
Sbjct: 1   MNMDMCQNVSVSGECQQVQVFAPSCSS---SLDDLFSAQNTEVDVELEWLSEFVEDCFSS 57

Query: 833 PPSCVLVPSGVVQNTGTITSKPSGGTILKRPTRENESPLQKFSVPGKARSKRKRLSAPRT 654
           PPSCVLVP GV + T T T+  SG   LKRP ++NESPLQ F+VPGKARSKRKRLSAPRT
Sbjct: 58  PPSCVLVPIGV-KTTSTSTNLSSG--TLKRPQQQNESPLQNFAVPGKARSKRKRLSAPRT 114

Query: 653 TTNKDPLSIWSHHLNPKNEAFSSDPPLLKQAYWLADSELINVPYKHKDID--VDEKEEKG 480
             NKDPL+IWSHHLNP+NE+  SDPPLLKQAYWLADSELI    K ++ +  V +++EK 
Sbjct: 115 --NKDPLNIWSHHLNPQNESLCSDPPLLKQAYWLADSELIMPKPKDEEQEEVVTKEDEKV 172

Query: 479 VVMSXXXXXXXXXXXXXXXXVIPMP-RRCTHCLAQRTPQWRAGPLGPKTLCNACGVRYKS 303
           + +                   PMP RRC+HCLAQRTPQWRAGPLGPKTLCNACGVRYKS
Sbjct: 173 INVMSKESFGDSELEEGSNGQQPMPTRRCSHCLAQRTPQWRAGPLGPKTLCNACGVRYKS 232

Query: 302 GRLLPEYRPAKSPTFVSYLHSNSHKKVMEMRMAVPSS 192
           GRLLPEYRPAKSPTFVSYLHSNSHKKVMEMRMAV S+
Sbjct: 233 GRLLPEYRPAKSPTFVSYLHSNSHKKVMEMRMAVFST 269


>gb|ACU17869.1| unknown [Glycine max]
          Length = 274

 Score =  354 bits (908), Expect = 3e-95
 Identities = 190/277 (68%), Positives = 213/277 (76%), Gaps = 12/277 (4%)
 Frame = -3

Query: 986 MNMDVCQNE---------KVLAPSCSNLSTTLDDLFSAQNTEVDVEMEWLSVFVEDCFSS 834
           MNMD+CQN          +V APSCS+   +LDDLFSAQNTEVDVE+EWLS FVEDCFSS
Sbjct: 1   MNMDMCQNVSVSGECQQVQVFAPSCSS---SLDDLFSAQNTEVDVELEWLSEFVEDCFSS 57

Query: 833 PPSCVLVPSGVVQNTGTITSKPSGGTILKRPTRENESPLQKFSVPGKARSKRKRLSAPRT 654
           PPSCVLVP GV + T T T+  SG   LKRP ++NESPLQ F+VPGKARSKRKRLSAPRT
Sbjct: 58  PPSCVLVPIGV-KTTSTSTNLSSG--TLKRPQQQNESPLQNFAVPGKARSKRKRLSAPRT 114

Query: 653 TTNKDPLSIWSHHLNPKNEAFSSDPPLLKQAYWLADSELINVPYKHKDID--VDEKEEKG 480
             NKDPL+IWSHHLNP+NE+  SDPPLLKQAYWLADSELI    K ++ +  V +++EK 
Sbjct: 115 --NKDPLNIWSHHLNPQNESLCSDPPLLKQAYWLADSELIMPKPKDEEQEEVVTKEDEKV 172

Query: 479 VVMSXXXXXXXXXXXXXXXXVIPMP-RRCTHCLAQRTPQWRAGPLGPKTLCNACGVRYKS 303
           + +                   PMP RRC+HCLAQR PQWRAGPLGPKTLCNACGVRYKS
Sbjct: 173 INVMSKESFGDSELEEGSNGQQPMPTRRCSHCLAQRAPQWRAGPLGPKTLCNACGVRYKS 232

Query: 302 GRLLPEYRPAKSPTFVSYLHSNSHKKVMEMRMAVPSS 192
           GRLLPEYRPAKSPTFVSYLHSNSHKKVMEMRMAV S+
Sbjct: 233 GRLLPEYRPAKSPTFVSYLHSNSHKKVMEMRMAVFST 269


>ref|XP_003624611.1| GATA transcription factor [Medicago truncatula]
           gi|124365580|gb|ABN09814.1| Zinc finger, GATA-type
           [Medicago truncatula] gi|355499626|gb|AES80829.1| GATA
           transcription factor [Medicago truncatula]
          Length = 264

 Score =  335 bits (860), Expect = 9e-90
 Identities = 189/283 (66%), Positives = 208/283 (73%), Gaps = 17/283 (6%)
 Frame = -3

Query: 980 MDVCQN---------EKVLAPSCSNLSTTLDDLFSAQNTEVDVEMEWLSVFVEDCFSSPP 828
           MDVCQN         EKVL PSCSNLS++LDDLFSAQN EVDV MEWLSVFVEDCFSSP 
Sbjct: 1   MDVCQNVQVSSECKQEKVLNPSCSNLSSSLDDLFSAQNMEVDVGMEWLSVFVEDCFSSPQ 60

Query: 827 SCVLVPSGVVQNTGTITSKPSGGTILKRPTRENESPLQKFSVPGKARSKRKRLSAPRTTT 648
           SCVL+PS V   T T++SKPS  T+ K    +NESP   F+VPGKARSKRKRLSAPR   
Sbjct: 61  SCVLLPSSVQNTTSTVSSKPSN-TVKKPKQEQNESP---FAVPGKARSKRKRLSAPRRP- 115

Query: 647 NKDPLSIWSHHLNPKNEAFSSDPPLLKQAYWLADSELINVPYKHKDIDVD----EKEE-- 486
            KDPLSI S+ LNP+NE+  SDPPLLKQAYWLADSEL+ VP   K++  D    EKE   
Sbjct: 116 -KDPLSILSNTLNPQNESLCSDPPLLKQAYWLADSELM-VPKGEKEVTKDCEVVEKERFD 173

Query: 485 -KGVVMSXXXXXXXXXXXXXXXXVIPMP-RRCTHCLAQRTPQWRAGPLGPKTLCNACGVR 312
            +G V +                  P+P RRCTHCL+QRTPQWRAGPLGPKTLCNACGVR
Sbjct: 174 FEGFVNNGQN---------------PIPTRRCTHCLSQRTPQWRAGPLGPKTLCNACGVR 218

Query: 311 YKSGRLLPEYRPAKSPTFVSYLHSNSHKKVMEMRMAVPSSSIP 183
           YKSGRLLPEYRPAKSPTFVS+LHSNSHKKVMEMRM V SS  P
Sbjct: 219 YKSGRLLPEYRPAKSPTFVSFLHSNSHKKVMEMRMNVVSSINP 261


>ref|XP_003548060.1| PREDICTED: GATA transcription factor 9-like [Glycine max]
          Length = 279

 Score =  332 bits (850), Expect = 1e-88
 Identities = 176/277 (63%), Positives = 197/277 (71%), Gaps = 15/277 (5%)
 Frame = -3

Query: 986 MNMDVCQNEKVLAPSCSNLSTTLDDLFSAQNTEVDVEMEWLSVFVEDCFSSPPSCVLVPS 807
           M+MDVC+N  V +  C     TLDDLF  QNTEVD  MEWLSVFVEDCFSS PSC+L PS
Sbjct: 1   MDMDVCRNISVSSSECQQELPTLDDLFCHQNTEVDFGMEWLSVFVEDCFSSRPSCLLPPS 60

Query: 806 GVVQNTGTITSKPSGGTILKRPTRENESPLQKFSVPGKARSKRKRLSAPRTTTNKDPLSI 627
           G    T + ++KPS GTI+ RP + +  PLQ F+VPGKARSKRKRLSAPRTT  K  LS 
Sbjct: 61  GGGVQTTSTSTKPSSGTIMPRPQQSHHCPLQNFAVPGKARSKRKRLSAPRTT--KHTLST 118

Query: 626 WSHHLNPKNEAFSSDPPLLKQAYWLADSELINVPYKHKDIDVDEKEEKGVVMSXXXXXXX 447
           WS H + +N+  SSDPPLLKQAYWLADSELI VP K KD++    +E+GVV+        
Sbjct: 119 WSQHFSSQNDGVSSDPPLLKQAYWLADSELI-VP-KKKDVE----QEEGVVVVVKKEKLG 172

Query: 446 XXXXXXXXXVI---------------PMPRRCTHCLAQRTPQWRAGPLGPKTLCNACGVR 312
                     +               P+PRRCTHCLAQRTPQWRAGPLGPKTLCNACGVR
Sbjct: 173 DYYDDDEGDEVNNNNTNNNNNDNVQHPIPRRCTHCLAQRTPQWRAGPLGPKTLCNACGVR 232

Query: 311 YKSGRLLPEYRPAKSPTFVSYLHSNSHKKVMEMRMAV 201
           YKSGRLLPEYRPAKSPTFVSYLHSNSHKKVMEMRM V
Sbjct: 233 YKSGRLLPEYRPAKSPTFVSYLHSNSHKKVMEMRMGV 269


Top