BLASTX nr result

ID: Glycyrrhiza23_contig00016499 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00016499
         (700 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABN08716.1| SAM (and some other nucleotide) binding motif [Me...   277   1e-72
ref|XP_003543023.1| PREDICTED: tRNA (adenine-N(1)-)-methyltransf...   258   8e-67
ref|XP_004135565.1| PREDICTED: tRNA (adenine(58)-N(1))-methyltra...   239   3e-61
ref|XP_002521442.1| tRNA, putative [Ricinus communis] gi|2235393...   238   1e-60
ref|XP_002324584.1| predicted protein [Populus trichocarpa] gi|2...   226   3e-57

>gb|ABN08716.1| SAM (and some other nucleotide) binding motif [Medicago truncatula]
          Length = 307

 Score =  277 bits (709), Expect = 1e-72
 Identities = 135/160 (84%), Positives = 142/160 (88%)
 Frame = -3

Query: 698 RDDFERTGLSSLISVGVRDIQGEGFPDEFIGLTDSAFLDLPQPWLAIPSAARMLKQDGTL 519
           RDDFER GLSSLIS GVRDIQGEGFPDE   L DS FLDLPQPWLAIPSAA+MLKQDGT 
Sbjct: 151 RDDFERIGLSSLISCGVRDIQGEGFPDELNELADSVFLDLPQPWLAIPSAAKMLKQDGTF 210

Query: 518 CSFSPCVEQVQRSCEALRTCFTDIRTFEVLLRTYEVREGKVESFHGDGNGSNGSLPCKRR 339
           CSFSPC+EQVQRSC+AL++CFTDIRTFEVLLRTYEVRE K +SFHGD    NGSLPCKRR
Sbjct: 211 CSFSPCIEQVQRSCDALQSCFTDIRTFEVLLRTYEVREVKTKSFHGD---DNGSLPCKRR 267

Query: 338 QCSDGNYVLSGTTTSVMARPCGEARGHTGYLTFARLKCLS 219
           QCSDGNYVLS  T+SVMARPC EARGHTGYLTFARLKC S
Sbjct: 268 QCSDGNYVLSNPTSSVMARPCDEARGHTGYLTFARLKCFS 307


>ref|XP_003543023.1| PREDICTED: tRNA (adenine-N(1)-)-methyltransferase catalytic subunit
           TRMT61A-like [Glycine max]
          Length = 309

 Score =  258 bits (659), Expect = 8e-67
 Identities = 127/163 (77%), Positives = 142/163 (87%), Gaps = 3/163 (1%)
 Frame = -3

Query: 698 RDDFERTGLSSLISVGVRDIQGEGFPDEFIGLTDSAFLDLPQPWLAIPSAARMLKQDGTL 519
           R DFERTGLSSL++V VRDIQGEGFPD F G+ DS FLDLPQPWL IPSAA++L+ DGTL
Sbjct: 150 RADFERTGLSSLVTVQVRDIQGEGFPDTFTGMADSVFLDLPQPWLVIPSAAKVLRHDGTL 209

Query: 518 CSFSPCVEQVQRSCEALRTCFTDIRTFEVLLRTYEVREGKVESFHGDGNGSNGSLPCKRR 339
           CSFSPC+EQVQR+CE LRTCFTDIRTFEVLLRTYEVRE K++S  GDG   NGSLP KRR
Sbjct: 210 CSFSPCIEQVQRTCETLRTCFTDIRTFEVLLRTYEVREEKMQSLCGDG---NGSLPSKRR 266

Query: 338 QCSDGNYVLSGTT---TSVMARPCGEARGHTGYLTFARLKCLS 219
           QCSDG+YVLS ++   +SVMARPCGEARGHTGYLTFAR+K LS
Sbjct: 267 QCSDGSYVLSSSSPSISSVMARPCGEARGHTGYLTFARVKSLS 309


>ref|XP_004135565.1| PREDICTED: tRNA (adenine(58)-N(1))-methyltransferase catalytic
           subunit TRMT61A-like [Cucumis sativus]
           gi|449528672|ref|XP_004171327.1| PREDICTED: tRNA
           (adenine(58)-N(1))-methyltransferase catalytic subunit
           TRMT61A-like [Cucumis sativus]
          Length = 310

 Score =  239 bits (611), Expect = 3e-61
 Identities = 116/161 (72%), Positives = 137/161 (85%), Gaps = 1/161 (0%)
 Frame = -3

Query: 698 RDDFERTGLSSLISVGVRDIQGEGFPDEFIGLTDSAFLDLPQPWLAIPSAARMLKQDGTL 519
           R+DFE+TGL+SL++VGVRDIQG+GFP+EF+GL DS FLDLPQPWLAIPSA RMLKQDG L
Sbjct: 150 REDFEKTGLTSLVTVGVRDIQGQGFPEEFVGLADSVFLDLPQPWLAIPSAERMLKQDGML 209

Query: 518 CSFSPCVEQVQRSCEALRTCFTDIRTFEVLLRTYEVREGKVESFHGDGNGSNGSLPCKRR 339
           CSFSPC+EQVQRS E LR+ FTDIRTFEVLLRTYEV+EG+ ES   DG GS G  PCKRR
Sbjct: 210 CSFSPCIEQVQRSVETLRSKFTDIRTFEVLLRTYEVKEGRTESNQVDGGGSVGLPPCKRR 269

Query: 338 -QCSDGNYVLSGTTTSVMARPCGEARGHTGYLTFARLKCLS 219
            +  + + + + ++T+VM RPC EARGHTGYLTFARL+CLS
Sbjct: 270 LRSKESDDMDNESSTTVMVRPCSEARGHTGYLTFARLRCLS 310


>ref|XP_002521442.1| tRNA, putative [Ricinus communis] gi|223539341|gb|EEF40932.1| tRNA,
           putative [Ricinus communis]
          Length = 311

 Score =  238 bits (606), Expect = 1e-60
 Identities = 119/162 (73%), Positives = 139/162 (85%), Gaps = 2/162 (1%)
 Frame = -3

Query: 698 RDDFERTGLSSLISVGVRDIQGEGFPDEFIGLTDSAFLDLPQPWLAIPSAARMLKQDGTL 519
           R+DFE+TG+SSL++VGVRDIQGEGFPDE+ GL DS FLDLPQPWLAIPSAA+MLKQDG L
Sbjct: 150 REDFEKTGVSSLVTVGVRDIQGEGFPDEYSGLVDSVFLDLPQPWLAIPSAAKMLKQDGVL 209

Query: 518 CSFSPCVEQVQRSCEALRTCFTDIRTFEVLLRTYEVREGKVESFHGDGNGSNGSLPCKRR 339
           CSFSPC+EQVQRSCE LR+ FTDIRTFEVLLRTYEVRE K++   G+   S GS P KRR
Sbjct: 210 CSFSPCIEQVQRSCETLRSNFTDIRTFEVLLRTYEVREVKMDCGQGEEGISLGSPPYKRR 269

Query: 338 Q-CSDGNYVLSGTTTSV-MARPCGEARGHTGYLTFARLKCLS 219
           Q  S+G+ V + +++ V MARPCG++RGHTGYLTFARLKCLS
Sbjct: 270 QRSSEGSNVQNSSSSPVIMARPCGDSRGHTGYLTFARLKCLS 311


>ref|XP_002324584.1| predicted protein [Populus trichocarpa] gi|222866018|gb|EEF03149.1|
           predicted protein [Populus trichocarpa]
          Length = 311

 Score =  226 bits (577), Expect = 3e-57
 Identities = 112/162 (69%), Positives = 134/162 (82%), Gaps = 2/162 (1%)
 Frame = -3

Query: 698 RDDFERTGLSSLISVGVRDIQGEGFPDEFIGLTDSAFLDLPQPWLAIPSAARMLKQDGTL 519
           R+DF+ TG+ SL++VG RDIQGEGFPDE+ GL DS FLDLPQPWLAI SA +MLKQDGTL
Sbjct: 150 REDFQSTGVGSLVTVGARDIQGEGFPDEYSGLADSVFLDLPQPWLAILSAGKMLKQDGTL 209

Query: 518 CSFSPCVEQVQRSCEALRTCFTDIRTFEVLLRTYEVREGKVESFHGDGNGSNGSLPCKRR 339
           CSFSPC+EQVQR+CEAL++ F DIRTFEVLLRT+EV EGK++S  GD   S GS P KRR
Sbjct: 210 CSFSPCIEQVQRTCEALKSNFRDIRTFEVLLRTFEVHEGKMDSCQGDEGVSVGSPPYKRR 269

Query: 338 Q-CSDGNYVL-SGTTTSVMARPCGEARGHTGYLTFARLKCLS 219
           Q  S+G+ V  S ++ ++ ARPC +ARGHTGYLTF+RLKCLS
Sbjct: 270 QRSSEGSIVQDSSSSPTIKARPCADARGHTGYLTFSRLKCLS 311


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