BLASTX nr result

ID: Glycyrrhiza23_contig00016477 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00016477
         (712 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003552959.1| PREDICTED: UPF0503 protein At3g09070, chloro...    59   9e-19
ref|XP_002534570.1| conserved hypothetical protein [Ricinus comm...    55   2e-14
ref|XP_002322958.1| predicted protein [Populus trichocarpa] gi|2...    54   1e-12
ref|XP_002308207.1| predicted protein [Populus trichocarpa] gi|2...    51   7e-12
ref|XP_004143144.1| PREDICTED: UPF0503 protein At3g09070, chloro...    50   7e-12

>ref|XP_003552959.1| PREDICTED: UPF0503 protein At3g09070, chloroplastic-like [Glycine
           max]
          Length = 544

 Score = 58.9 bits (141), Expect(3) = 9e-19
 Identities = 25/40 (62%), Positives = 33/40 (82%)
 Frame = -3

Query: 299 ETLTKVREYGLSFGRRSCGSDPRLFVDNSRFSFDAPQPSW 180
           E  ++V EYG++ GRRSC +DPRL VD+SRFSF+AP+ SW
Sbjct: 206 EAQSEVGEYGIALGRRSCDTDPRLSVDDSRFSFEAPRASW 245



 Score = 58.2 bits (139), Expect(3) = 9e-19
 Identities = 26/37 (70%), Positives = 32/37 (86%)
 Frame = -2

Query: 510 IDLELQTRKNVGRDFRDIVVSFWDAASLFSKRLRKWK 400
           IDLEL+++KN GRDFRDI  SF +AAS+FSKRL KW+
Sbjct: 137 IDLELRSKKNTGRDFRDIAASFREAASVFSKRLMKWR 173



 Score = 22.3 bits (46), Expect(3) = 9e-19
 Identities = 10/21 (47%), Positives = 12/21 (57%)
 Frame = -1

Query: 361 RDNDGIGVGLKSVEIEKQGAR 299
           R NDG+G G     +EK G R
Sbjct: 182 RYNDGLGAGAGVGPVEKLGLR 202


>ref|XP_002534570.1| conserved hypothetical protein [Ricinus communis]
           gi|223525005|gb|EEF27813.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 676

 Score = 55.1 bits (131), Expect(3) = 2e-14
 Identities = 23/37 (62%), Positives = 31/37 (83%)
 Frame = -2

Query: 510 IDLELQTRKNVGRDFRDIVVSFWDAASLFSKRLRKWK 400
           IDL+ QT+K  GRDF++I  SFW AAS+FSK+L+KW+
Sbjct: 248 IDLDSQTKKGSGRDFKEIAGSFWSAASVFSKKLQKWR 284



 Score = 45.1 bits (105), Expect(3) = 2e-14
 Identities = 30/82 (36%), Positives = 39/82 (47%), Gaps = 7/82 (8%)
 Frame = -3

Query: 404 GSGTKVEEKPSHRSQRQ*RNWCWFEECGD*EARGEETLTKVREYGLSFGRRSCGSDP--- 234
           GS T   EKP  R  R                   ET +++ +YG  FGRRSC +DP   
Sbjct: 300 GSATLPVEKPIGRQYR-------------------ETQSEIADYG--FGRRSCDTDPRFS 338

Query: 233 ----RLFVDNSRFSFDAPQPSW 180
               R+  D+SR+SFD P+ SW
Sbjct: 339 LDAGRISFDDSRYSFDEPRASW 360



 Score = 24.3 bits (51), Expect(3) = 2e-14
 Identities = 11/24 (45%), Positives = 13/24 (54%)
 Frame = -2

Query: 195 PSTFLDGYLIGRKACPRFSPMVPV 124
           P    DGYLIG +  PR   M+ V
Sbjct: 356 PRASWDGYLIGTRNFPRMPTMLSV 379


>ref|XP_002322958.1| predicted protein [Populus trichocarpa] gi|222867588|gb|EEF04719.1|
           predicted protein [Populus trichocarpa]
          Length = 628

 Score = 53.5 bits (127), Expect(2) = 1e-12
 Identities = 22/37 (59%), Positives = 31/37 (83%)
 Frame = -2

Query: 510 IDLELQTRKNVGRDFRDIVVSFWDAASLFSKRLRKWK 400
           IDL+ Q++K  GRDF++I  SFW AAS+FSK+L+KW+
Sbjct: 218 IDLDSQSKKTSGRDFKEIAGSFWSAASVFSKKLQKWR 254



 Score = 45.1 bits (105), Expect(2) = 1e-12
 Identities = 31/87 (35%), Positives = 40/87 (45%), Gaps = 7/87 (8%)
 Frame = -3

Query: 419 RG*GNGSGTKVEEKPSHRSQRQ*RNWCWFEECGD*EARGEETLTKVREYGLSFGRRSCGS 240
           R  G GS T   EKP  R  R                   ET +++ +YG  FGRRSC +
Sbjct: 263 RNDGPGSATLPVEKPIGRQYR-------------------ETQSEIADYG--FGRRSCDT 301

Query: 239 DPRLFVD-------NSRFSFDAPQPSW 180
           DPR  +D       + R+SFD P+ SW
Sbjct: 302 DPRFSLDAGRISFDDPRYSFDEPRASW 328


>ref|XP_002308207.1| predicted protein [Populus trichocarpa] gi|222854183|gb|EEE91730.1|
           predicted protein [Populus trichocarpa]
          Length = 686

 Score = 51.2 bits (121), Expect(2) = 7e-12
 Identities = 21/37 (56%), Positives = 30/37 (81%)
 Frame = -2

Query: 510 IDLELQTRKNVGRDFRDIVVSFWDAASLFSKRLRKWK 400
           IDL+ Q++K  GRD ++I  SFW AAS+FSK+L+KW+
Sbjct: 272 IDLDSQSKKTSGRDLKEIAGSFWSAASVFSKKLQKWR 308



 Score = 45.1 bits (105), Expect(2) = 7e-12
 Identities = 31/87 (35%), Positives = 40/87 (45%), Gaps = 7/87 (8%)
 Frame = -3

Query: 419 RG*GNGSGTKVEEKPSHRSQRQ*RNWCWFEECGD*EARGEETLTKVREYGLSFGRRSCGS 240
           R  G GS T   EKP  R  R                   ET +++ +YG  FGRRSC +
Sbjct: 317 RNGGPGSATLPVEKPIGRQYR-------------------ETQSEIADYG--FGRRSCDT 355

Query: 239 DPRLFVD-------NSRFSFDAPQPSW 180
           DPR  +D       + R+SFD P+ SW
Sbjct: 356 DPRFSLDAGRISFDDPRYSFDEPRASW 382


>ref|XP_004143144.1| PREDICTED: UPF0503 protein At3g09070, chloroplastic-like [Cucumis
           sativus] gi|449496609|ref|XP_004160178.1| PREDICTED:
           UPF0503 protein At3g09070, chloroplastic-like [Cucumis
           sativus]
          Length = 575

 Score = 50.1 bits (118), Expect(2) = 7e-12
 Identities = 22/37 (59%), Positives = 28/37 (75%)
 Frame = -2

Query: 510 IDLELQTRKNVGRDFRDIVVSFWDAASLFSKRLRKWK 400
           IDLE + +KN GRD R+I  S W+AAS FSK+L KW+
Sbjct: 161 IDLEFRRKKNAGRDLREIAGSVWEAASGFSKKLGKWR 197



 Score = 46.2 bits (108), Expect(2) = 7e-12
 Identities = 25/47 (53%), Positives = 31/47 (65%), Gaps = 7/47 (14%)
 Frame = -3

Query: 299 ETLTKVREYGLSFGRRSCGSDPRLFV-------DNSRFSFDAPQPSW 180
           ET ++V EYGL  GRRSC +DPR  V       D+SR+SFD P+ SW
Sbjct: 228 ETRSEVGEYGL--GRRSCDTDPRFSVDAGRMSLDDSRYSFDEPRASW 272


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