BLASTX nr result

ID: Glycyrrhiza23_contig00016447 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00016447
         (376 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_568489.1| uncharacterized protein [Arabidopsis thaliana] ...    75   7e-12
ref|XP_003555797.1| PREDICTED: uncharacterized protein LOC100806...    74   2e-11
ref|XP_002512527.1| conserved hypothetical protein [Ricinus comm...    73   3e-11
ref|XP_002872235.1| hypothetical protein ARALYDRAFT_489512 [Arab...    70   2e-10
ref|XP_002330029.1| predicted protein [Populus trichocarpa] gi|2...    62   4e-08

>ref|NP_568489.1| uncharacterized protein [Arabidopsis thaliana]
           gi|21593513|gb|AAM65480.1| unknown [Arabidopsis
           thaliana] gi|111074252|gb|ABH04499.1| At5g26790
           [Arabidopsis thaliana] gi|332006222|gb|AED93605.1|
           uncharacterized protein [Arabidopsis thaliana]
          Length = 68

 Score = 74.7 bits (182), Expect = 7e-12
 Identities = 40/66 (60%), Positives = 48/66 (72%), Gaps = 5/66 (7%)
 Frame = -1

Query: 361 ASIFRWVMVKFSARSSVMRWTS----ELMTLNVV-DELVWGVVMAFESVALVSMLCFFFL 197
           +SI  W  + F++  SV RW S    EL  L+VV D++VW VV AFESVALVSMLCFFFL
Sbjct: 3   SSIRWWWPIHFTSSGSVPRWLSWRRPELSLLSVVVDDVVWKVVTAFESVALVSMLCFFFL 62

Query: 196 FCGCTI 179
           FCGCT+
Sbjct: 63  FCGCTV 68


>ref|XP_003555797.1| PREDICTED: uncharacterized protein LOC100806666 [Glycine max]
           gi|255646885|gb|ACU23912.1| unknown [Glycine max]
          Length = 77

 Score = 73.6 bits (179), Expect = 2e-11
 Identities = 41/78 (52%), Positives = 51/78 (65%), Gaps = 17/78 (21%)
 Frame = -1

Query: 364 MASIFRW-----------------VMVKFSARSSVMRWTSELMTLNVVDELVWGVVMAFE 236
           MAS FRW                 +  ++S R  ++RW S +M++++VDELVW VV AFE
Sbjct: 1   MASTFRWGPMWDLSTVSSWPLASYISPRWSPRR-LLRW-SGMMSVSIVDELVWRVVTAFE 58

Query: 235 SVALVSMLCFFFLFCGCT 182
           SVALVSMLCFFFLFCGCT
Sbjct: 59  SVALVSMLCFFFLFCGCT 76


>ref|XP_002512527.1| conserved hypothetical protein [Ricinus communis]
           gi|223548488|gb|EEF49979.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 78

 Score = 72.8 bits (177), Expect = 3e-11
 Identities = 34/60 (56%), Positives = 43/60 (71%)
 Frame = -1

Query: 358 SIFRWVMVKFSARSSVMRWTSELMTLNVVDELVWGVVMAFESVALVSMLCFFFLFCGCTI 179
           S+ RW     S+  S  RW    +  ++VD++VWG++ AFESVALVSMLCFFFLFCGCTI
Sbjct: 20  SLLRWPQFMSSSYLSP-RWPELNLNFSIVDDVVWGLITAFESVALVSMLCFFFLFCGCTI 78


>ref|XP_002872235.1| hypothetical protein ARALYDRAFT_489512 [Arabidopsis lyrata subsp.
           lyrata] gi|297318072|gb|EFH48494.1| hypothetical protein
           ARALYDRAFT_489512 [Arabidopsis lyrata subsp. lyrata]
          Length = 66

 Score = 69.7 bits (169), Expect = 2e-10
 Identities = 38/64 (59%), Positives = 45/64 (70%), Gaps = 5/64 (7%)
 Frame = -1

Query: 361 ASIFRWVMVKFSARSSVMRWTS----ELMTLNVV-DELVWGVVMAFESVALVSMLCFFFL 197
           +SI  W  + F++  S  RW S    EL  L+VV D++VW VV AFESVALVSMLCFFFL
Sbjct: 3   SSIRWWWPIHFTSPGSAPRWLSWRRPELSLLSVVFDDVVWKVVTAFESVALVSMLCFFFL 62

Query: 196 FCGC 185
           FCGC
Sbjct: 63  FCGC 66


>ref|XP_002330029.1| predicted protein [Populus trichocarpa] gi|222871454|gb|EEF08585.1|
           predicted protein [Populus trichocarpa]
          Length = 96

 Score = 62.4 bits (150), Expect = 4e-08
 Identities = 27/45 (60%), Positives = 36/45 (80%)
 Frame = -1

Query: 313 VMRWTSELMTLNVVDELVWGVVMAFESVALVSMLCFFFLFCGCTI 179
           +MRW    +  +++D++VW +V AFESVALVSML FFFLFCGCT+
Sbjct: 54  MMRWPE--LDFSILDDVVWSLVTAFESVALVSMLAFFFLFCGCTV 96


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